RNA–Protein interactions for RNA: ENST00000465887.2

POLR1D-204, Transcript of RNA polymerase I and III subunit D, humanhuman

TSL 2

Gene POLR1D, Length 2,118 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1D-204ENST00000465887 NISCHQ9Y2I1 1504 aa36.98■■■■□ 3.51
POLR1D-204ENST00000465887 CCDC180Q9P1Z9 1646 aa32.56■■■□□ 2.8
POLR1D-204ENST00000465887 ABCC9O60706 1549 aa31.05■■■□□ 2.56
POLR1D-204ENST00000465887 ZCCHC6Q5VYS8 1495 aaKnown RBP30.99■■■□□ 2.55
POLR1D-204ENST00000465887 DCAF1Q9Y4B6 1507 aa30.57■■■□□ 2.49
POLR1D-204ENST00000465887 DCAF8L2P0C7V8 631 aa30.5■■■□□ 2.47
POLR1D-204ENST00000465887 MYO15BQ96JP2 1530 aa30.36■■■□□ 2.45
POLR1D-204ENST00000465887 NACADO15069 1562 aa30.33■■■□□ 2.45
POLR1D-204ENST00000465887 RB1CC1Q8TDY2 1594 aa30.19■■■□□ 2.42
POLR1D-204ENST00000465887 SCRIBQ14160 1630 aa29.83■■■□□ 2.37
POLR1D-204ENST00000465887 SHROOM4Q9ULL8 1493 aa29.79■■■□□ 2.36
POLR1D-204ENST00000465887 UNC13AQ9UPW8 1703 aa29.78■■■□□ 2.36
POLR1D-204ENST00000465887 BICRAQ9NZM4 1560 aa29.35■■■□□ 2.29
POLR1D-204ENST00000465887 PABPN1Q86U42 306 aaKnown RBP eCLIP29.12■■■□□ 2.25
POLR1D-204ENST00000465887 CECR2Q9BXF3 1484 aa28.76■■■□□ 2.2
POLR1D-204ENST00000465887 BAZ1AQ9NRL2 1556 aaPredicted RBP28.58■■■□□ 2.17
POLR1D-204ENST00000465887 SMARCA4P51532 1647 aa28.58■■■□□ 2.17
POLR1D-204ENST00000465887 MROH2BQ7Z745 1585 aa28.56■■■□□ 2.16
POLR1D-204ENST00000465887 RSF1Q96T23 1441 aaPredicted RBP28.47■■■□□ 2.15
POLR1D-204ENST00000465887 EIF4G1Q04637 1599 aaKnown RBP28.46■■■□□ 2.15
POLR1D-204ENST00000465887 WIZO95785 1651 aa28.38■■■□□ 2.13
POLR1D-204ENST00000465887 SUPT5HO00267 1087 aaKnown RBP28.37■■■□□ 2.13
POLR1D-204ENST00000465887 PEG3Q9GZU2 1588 aa28.23■■■□□ 2.11
POLR1D-204ENST00000465887 CC2D2AQ9P2K1 1620 aa28.17■■■□□ 2.1
POLR1D-204ENST00000465887 ATAD2BQ9ULI0 1458 aa28.14■■■□□ 2.09
POLR1D-204ENST00000465887 SMARCA2P51531 1590 aa28.13■■■□□ 2.09
POLR1D-204ENST00000465887 TOP2AP11388 1531 aaKnown RBP28.02■■■□□ 2.08
POLR1D-204ENST00000465887 NCAPD3P42695 1498 aa27.94■■■□□ 2.06
POLR1D-204ENST00000465887 BAZ1BQ9UIG0 1483 aaKnown RBP27.94■■■□□ 2.06
POLR1D-204ENST00000465887 HMGXB3Q12766 1538 aa27.94■■■□□ 2.06
POLR1D-204ENST00000465887 DNAJC5BQ9UF47 199 aa27.74■■■□□ 2.03
POLR1D-204ENST00000465887 CCDC88BA6NC98 1476 aa27.67■■■□□ 2.02
POLR1D-204ENST00000465887 PRDM2Q13029 1718 aa27.3■■□□□ 1.96
POLR1D-204ENST00000465887 CFTRP13569 1480 aa27.22■■□□□ 1.95
POLR1D-204ENST00000465887 CADPSQ9ULU8 1353 aa27.17■■□□□ 1.94
POLR1D-204ENST00000465887 NESP48681 1621 aa27.16■■□□□ 1.94
POLR1D-204ENST00000465887 LAMC3Q9Y6N6 1575 aa27.14■■□□□ 1.93
POLR1D-204ENST00000465887 ABCC8Q09428 1581 aa27.01■■□□□ 1.91
POLR1D-204ENST00000465887 KIF21AQ7Z4S6 1674 aa26.96■■□□□ 1.91
POLR1D-204ENST00000465887 CHIC1Q5VXU3 224 aa26.95■■□□□ 1.9
POLR1D-204ENST00000465887 FANCD2Q9BXW9 1451 aa26.91■■□□□ 1.9
POLR1D-204ENST00000465887 PDS5BQ9NTI5 1447 aa26.83■■□□□ 1.89
POLR1D-204ENST00000465887 SYNJ1O43426 1573 aa26.82■■□□□ 1.88
POLR1D-204ENST00000465887 WRNQ14191 1432 aaPredicted RBP eCLIP26.8■■□□□ 1.88
POLR1D-204ENST00000465887 CEP164Q9UPV0 1460 aa26.8■■□□□ 1.88
POLR1D-204ENST00000465887 BIVM-ERCC5R4GMW8 1640 aa26.76■■□□□ 1.87
POLR1D-204ENST00000465887 CUX1P39880 1505 aa26.75■■□□□ 1.87
POLR1D-204ENST00000465887 TOP2BQ02880 1626 aa26.73■■□□□ 1.87
POLR1D-204ENST00000465887 TRIM41Q8WV44 630 aa26.69■■□□□ 1.86
POLR1D-204ENST00000465887 DNMBPQ6XZF7 1577 aa26.65■■□□□ 1.86
POLR1D-204ENST00000465887 URB2Q14146 1524 aaKnown RBP26.64■■□□□ 1.86
POLR1D-204ENST00000465887 ERCC6Q03468 1493 aa26.63■■□□□ 1.85
POLR1D-204ENST00000465887 TOPBP1Q92547 1522 aa26.6■■□□□ 1.85
POLR1D-204ENST00000465887 THOC2Q8NI27 1593 aaKnown RBP26.59■■□□□ 1.85
POLR1D-204ENST00000465887 MRC2Q9UBG0 1479 aa26.58■■□□□ 1.84
POLR1D-204ENST00000465887 WDR62O43379 1518 aa26.51■■□□□ 1.83
POLR1D-204ENST00000465887 FGD5Q6ZNL6 1462 aa26.5■■□□□ 1.83
POLR1D-204ENST00000465887 POLA1P09884 1462 aaPredicted RBP26.43■■□□□ 1.82
POLR1D-204ENST00000465887 WDR97A6NE52 1622 aa26.36■■□□□ 1.81
POLR1D-204ENST00000465887 SOGA1O94964 1423 aa26.34■■□□□ 1.81
POLR1D-204ENST00000465887 RAD54L2Q9Y4B4 1467 aa26.33■■□□□ 1.8
POLR1D-204ENST00000465887 RUSC2Q8N2Y8 1516 aa26.31■■□□□ 1.8
POLR1D-204ENST00000465887 TARBP1Q13395 1621 aaKnown RBP26.31■■□□□ 1.8
POLR1D-204ENST00000465887 CUX2O14529 1486 aa26.29■■□□□ 1.8
POLR1D-204ENST00000465887 ABCA10Q8WWZ4 1543 aa26.24■■□□□ 1.79
POLR1D-204ENST00000465887 FAM9AQ8IZU1 332 aaPredicted RBP26.21■■□□□ 1.79
POLR1D-204ENST00000465887 IFT140Q96RY7 1462 aa26.16■■□□□ 1.78
POLR1D-204ENST00000465887 ABCA5Q8WWZ7 1642 aa26.16■■□□□ 1.78
POLR1D-204ENST00000465887 EEA1Q15075 1411 aa26.15■■□□□ 1.78
POLR1D-204ENST00000465887 KIF27Q86VH2 1401 aa26.14■■□□□ 1.77
POLR1D-204ENST00000465887 PBRM1Q86U86 1689 aa26.08■■□□□ 1.77
POLR1D-204ENST00000465887 ZNF608Q9ULD9 1512 aaPredicted RBP26.08■■□□□ 1.76
POLR1D-204ENST00000465887 TDRD9Q8NDG6 1382 aaKnown RBP26.05■■□□□ 1.76
POLR1D-204ENST00000465887 EIF4G3O43432 1585 aaKnown RBP26.05■■□□□ 1.76
POLR1D-204ENST00000465887 GAPVD1Q14C86 1478 aa26.02■■□□□ 1.76
POLR1D-204ENST00000465887 CSRNP3Q8WYN3 585 aa26.01■■□□□ 1.75
POLR1D-204ENST00000465887 AQRO60306 1485 aaKnown RBP eCLIP25.99■■□□□ 1.756e-7■□□□□ 10.5
POLR1D-204ENST00000465887 KIF21BO75037 1637 aa25.96■■□□□ 1.75
POLR1D-204ENST00000465887 IGF1RP08069 1367 aa25.94■■□□□ 1.74
POLR1D-204ENST00000465887 ERICH3Q5RHP9 1530 aa25.94■■□□□ 1.74
POLR1D-204ENST00000465887 CUL7Q14999 1698 aa25.92■■□□□ 1.74
POLR1D-204ENST00000465887 LOC105371045A0A1W2PR82 267 aa25.9■■□□□ 1.74
POLR1D-204ENST00000465887 PRXQ9BXM0 1461 aa25.9■■□□□ 1.74
POLR1D-204ENST00000465887 GRIN2BQ13224 1484 aa25.87■■□□□ 1.73
POLR1D-204ENST00000465887 EHMT2Q96KQ7 1210 aa25.86■■□□□ 1.73
POLR1D-204ENST00000465887 RAPGEF2Q9Y4G8 1499 aa25.84■■□□□ 1.73
POLR1D-204ENST00000465887 ADAMTS12P58397 1594 aa25.83■■□□□ 1.73
POLR1D-204ENST00000465887 GOLGA3Q08378 1498 aa25.81■■□□□ 1.72
POLR1D-204ENST00000465887 CARMIL1Q5VZK9 1371 aa25.8■■□□□ 1.72
POLR1D-204ENST00000465887 SNAPC4Q5SXM2 1469 aa25.79■■□□□ 1.72
POLR1D-204ENST00000465887 MAGI1Q96QZ7 1491 aaPredicted RBP25.72■■□□□ 1.71
POLR1D-204ENST00000465887 FHAD1B1AJZ9 1412 aa25.7■■□□□ 1.71
POLR1D-204ENST00000465887 CTTNBP2Q8WZ74 1663 aa25.66■■□□□ 1.7
POLR1D-204ENST00000465887 CHD1O14646 1710 aa25.64■■□□□ 1.7
POLR1D-204ENST00000465887 SYNJ2O15056 1496 aa25.62■■□□□ 1.69
POLR1D-204ENST00000465887 UBTFP17480 764 aaKnown RBP25.62■■□□□ 1.69
POLR1D-204ENST00000465887 TNIKQ9UKE5 1360 aa25.6■■□□□ 1.69
POLR1D-204ENST00000465887 GRIN2AQ12879 1464 aa25.58■■□□□ 1.69
POLR1D-204ENST00000465887 CEP170Q5SW79 1584 aa25.5■■□□□ 1.67
POLR1D-204ENST00000465887 CHMP7Q8WUX9 453 aaPredicted RBP25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms