RNA–Protein interactions for RNA: ENST00000465709.5

SUSD3-203, Transcript of sushi domain containing 3, humanhuman

TSL 3

Gene SUSD3, Length 463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3-203ENST00000465709 NISCHQ9Y2I1 1504 aa39.04■■■■□ 3.84
SUSD3-203ENST00000465709 ABCC9O60706 1549 aa36.86■■■■□ 3.49
SUSD3-203ENST00000465709 CCDC180Q9P1Z9 1646 aa35.65■■■■□ 3.3
SUSD3-203ENST00000465709 DNAJC5BQ9UF47 199 aa35.63■■■■□ 3.29
SUSD3-203ENST00000465709 RB1CC1Q8TDY2 1594 aa34.55■■■■□ 3.12
SUSD3-203ENST00000465709 PABPN1Q86U42 306 aaKnown RBP eCLIP34.09■■■■□ 3.05
SUSD3-203ENST00000465709 NACADO15069 1562 aa33.98■■■■□ 3.03
SUSD3-203ENST00000465709 UNC13AQ9UPW8 1703 aa33.76■■■□□ 2.99
SUSD3-203ENST00000465709 DNAJC5Q9H3Z4 198 aa33.71■■■□□ 2.99
SUSD3-203ENST00000465709 DCAF8L2P0C7V8 631 aa33.54■■■□□ 2.96
SUSD3-203ENST00000465709 BICRAQ9NZM4 1560 aa33.53■■■□□ 2.96
SUSD3-203ENST00000465709 CECR2Q9BXF3 1484 aa33.35■■■□□ 2.93
SUSD3-203ENST00000465709 CC2D2AQ9P2K1 1620 aa33.24■■■□□ 2.91
SUSD3-203ENST00000465709 MYO15BQ96JP2 1530 aa33.06■■■□□ 2.88
SUSD3-203ENST00000465709 SHROOM4Q9ULL8 1493 aa33■■■□□ 2.87
SUSD3-203ENST00000465709 EIF4G1Q04637 1599 aaKnown RBP32.85■■■□□ 2.85
SUSD3-203ENST00000465709 SCRIBQ14160 1630 aa32.4■■■□□ 2.78
SUSD3-203ENST00000465709 CUX2O14529 1486 aa32.32■■■□□ 2.76
SUSD3-203ENST00000465709 DCAF1Q9Y4B6 1507 aa32.16■■■□□ 2.74
SUSD3-203ENST00000465709 ZCCHC6Q5VYS8 1495 aaKnown RBP32.08■■■□□ 2.73
SUSD3-203ENST00000465709 ERCC6Q03468 1493 aa31.97■■■□□ 2.71
SUSD3-203ENST00000465709 TRIM41Q8WV44 630 aa31.76■■■□□ 2.67
SUSD3-203ENST00000465709 NCAPD3P42695 1498 aa31.34■■■□□ 2.61
SUSD3-203ENST00000465709 NESP48681 1621 aa31.27■■■□□ 2.6
SUSD3-203ENST00000465709 THOC2Q8NI27 1593 aaKnown RBP31.25■■■□□ 2.59
SUSD3-203ENST00000465709 ATAD2BQ9ULI0 1458 aa31.08■■■□□ 2.57
SUSD3-203ENST00000465709 HMGXB3Q12766 1538 aa31.03■■■□□ 2.56
SUSD3-203ENST00000465709 SMARCA2P51531 1590 aa31.01■■■□□ 2.56
SUSD3-203ENST00000465709 LAMC3Q9Y6N6 1575 aa30.9■■■□□ 2.54
SUSD3-203ENST00000465709 KIF21AQ7Z4S6 1674 aa30.88■■■□□ 2.53
SUSD3-203ENST00000465709 PDS5BQ9NTI5 1447 aa30.76■■■□□ 2.51
SUSD3-203ENST00000465709 BAZ1BQ9UIG0 1483 aaKnown RBP30.76■■■□□ 2.51
SUSD3-203ENST00000465709 SMARCA4P51532 1647 aa30.75■■■□□ 2.51
SUSD3-203ENST00000465709 BAZ1AQ9NRL2 1556 aaPredicted RBP30.73■■■□□ 2.51
SUSD3-203ENST00000465709 OSCARQ8IYS5 282 aa30.61■■■□□ 2.49
SUSD3-203ENST00000465709 MRC2Q9UBG0 1479 aa30.57■■■□□ 2.48
SUSD3-203ENST00000465709 WDR62O43379 1518 aa30.53■■■□□ 2.48
SUSD3-203ENST00000465709 PEG3Q9GZU2 1588 aa30.44■■■□□ 2.46
SUSD3-203ENST00000465709 RIMBP3CA6NJZ7 1639 aa30.38■■■□□ 2.45
SUSD3-203ENST00000465709 RIMBP3BA6NNM3 1639 aa30.38■■■□□ 2.45
SUSD3-203ENST00000465709 RIMBP3Q9UFD9 1639 aa30.38■■■□□ 2.45
SUSD3-203ENST00000465709 CADPSQ9ULU8 1353 aa30.34■■■□□ 2.45
SUSD3-203ENST00000465709 AEBP2Q6ZN18 517 aaPredicted RBP30.22■■■□□ 2.43
SUSD3-203ENST00000465709 CEP164Q9UPV0 1460 aa30.2■■■□□ 2.43
SUSD3-203ENST00000465709 ARHGEF11O15085 1522 aa30.14■■■□□ 2.42
SUSD3-203ENST00000465709 TRHP20396 242 aaPredicted RBP30.11■■■□□ 2.41
SUSD3-203ENST00000465709 MROH2BQ7Z745 1585 aa30.05■■■□□ 2.4
SUSD3-203ENST00000465709 FANCD2Q9BXW9 1451 aa30.03■■■□□ 2.4
SUSD3-203ENST00000465709 CYB5RLQ6IPT4 315 aa29.98■■■□□ 2.39
SUSD3-203ENST00000465709 URB2Q14146 1524 aaKnown RBP29.84■■■□□ 2.37
SUSD3-203ENST00000465709 ARAP1Q96P48 1450 aa29.74■■■□□ 2.35
SUSD3-203ENST00000465709 CFTRP13569 1480 aa29.73■■■□□ 2.35
SUSD3-203ENST00000465709 ZNF608Q9ULD9 1512 aaPredicted RBP29.69■■■□□ 2.34
SUSD3-203ENST00000465709 WIZO95785 1651 aa29.66■■■□□ 2.34
SUSD3-203ENST00000465709 IFT140Q96RY7 1462 aa29.63■■■□□ 2.33
SUSD3-203ENST00000465709 CHD1O14646 1710 aa29.54■■■□□ 2.32
SUSD3-203ENST00000465709 RSF1Q96T23 1441 aaPredicted RBP29.54■■■□□ 2.32
SUSD3-203ENST00000465709 EIF4G3O43432 1585 aaKnown RBP29.51■■■□□ 2.31
SUSD3-203ENST00000465709 PRDM2Q13029 1718 aa29.4■■■□□ 2.3
SUSD3-203ENST00000465709 FBLN2P98095 1184 aa29.37■■■□□ 2.29
SUSD3-203ENST00000465709 TOPBP1Q92547 1522 aa29.3■■■□□ 2.28
SUSD3-203ENST00000465709 AQRO60306 1485 aaKnown RBP eCLIP29.25■■■□□ 2.27
SUSD3-203ENST00000465709 TOP2AP11388 1531 aaKnown RBP29.2■■■□□ 2.27
SUSD3-203ENST00000465709 ABCC8Q09428 1581 aa29.18■■■□□ 2.26
SUSD3-203ENST00000465709 TARBP1Q13395 1621 aaKnown RBP29.14■■■□□ 2.26
SUSD3-203ENST00000465709 CLASP1Q7Z460 1538 aa29.13■■■□□ 2.25
SUSD3-203ENST00000465709 DNMBPQ6XZF7 1577 aa29.11■■■□□ 2.25
SUSD3-203ENST00000465709 SYNJ1O43426 1573 aa29.05■■■□□ 2.24
SUSD3-203ENST00000465709 ILDR1Q86SU0 546 aaPredicted RBP29.04■■■□□ 2.24
SUSD3-203ENST00000465709 SNAPC4Q5SXM2 1469 aa28.95■■■□□ 2.22
SUSD3-203ENST00000465709 GAPVD1Q14C86 1478 aa28.93■■■□□ 2.22
SUSD3-203ENST00000465709 CHMP7Q8WUX9 453 aaPredicted RBP28.93■■■□□ 2.22
SUSD3-203ENST00000465709 POLA1P09884 1462 aaPredicted RBP28.92■■■□□ 2.22
SUSD3-203ENST00000465709 TDRD9Q8NDG6 1382 aaKnown RBP28.87■■■□□ 2.21
SUSD3-203ENST00000465709 CCDC88BA6NC98 1476 aa28.85■■■□□ 2.21
SUSD3-203ENST00000465709 MAGI1Q96QZ7 1491 aaPredicted RBP28.83■■■□□ 2.21
SUSD3-203ENST00000465709 RAD54L2Q9Y4B4 1467 aa28.83■■■□□ 2.21
SUSD3-203ENST00000465709 WDR97A6NE52 1622 aa28.8■■■□□ 2.2
SUSD3-203ENST00000465709 SOGA1O94964 1423 aa28.77■■■□□ 2.2
SUSD3-203ENST00000465709 SYNJ2O15056 1496 aa28.74■■■□□ 2.19
SUSD3-203ENST00000465709 GRIN2BQ13224 1484 aa28.69■■■□□ 2.18
SUSD3-203ENST00000465709 KIF13AQ9H1H9 1805 aa28.66■■■□□ 2.18
SUSD3-203ENST00000465709 FGD5Q6ZNL6 1462 aa28.57■■■□□ 2.16
SUSD3-203ENST00000465709 ERCC6L2Q5T890 1561 aa28.56■■■□□ 2.16
SUSD3-203ENST00000465709 KDM4FA0A1W2PPD8 638 aa28.55■■■□□ 2.16
SUSD3-203ENST00000465709 PBRM1Q86U86 1689 aa28.52■■■□□ 2.16
SUSD3-203ENST00000465709 CEP170Q5SW79 1584 aa28.42■■■□□ 2.14
SUSD3-203ENST00000465709 FAM69CQ0P6D2 419 aa28.35■■■□□ 2.13
SUSD3-203ENST00000465709 KDM6BO15054 1643 aa28.35■■■□□ 2.13
SUSD3-203ENST00000465709 CUX1P39880 1505 aa28.32■■■□□ 2.12
SUSD3-203ENST00000465709 GRIN2AQ12879 1464 aa28.31■■■□□ 2.12
SUSD3-203ENST00000465709 ABCC10Q5T3U5 1492 aa28.31■■■□□ 2.12
SUSD3-203ENST00000465709 SHROOM2Q13796 1616 aa28.29■■■□□ 2.12
SUSD3-203ENST00000465709 ABCA5Q8WWZ7 1642 aa28.25■■■□□ 2.11
SUSD3-203ENST00000465709 NUP160Q12769 1436 aa28.24■■■□□ 2.11
SUSD3-203ENST00000465709 DIP2BQ9P265 1576 aa28.22■■■□□ 2.11
SUSD3-203ENST00000465709 MAPKBP1O60336 1514 aa28.18■■■□□ 2.1
SUSD3-203ENST00000465709 NPM1P06748 294 aaKnown RBP eCLIP28.17■■■□□ 2.1
SUSD3-203ENST00000465709 ABCA10Q8WWZ4 1543 aa28.16■■■□□ 2.1
SUSD3-203ENST00000465709 ADAMTS12P58397 1594 aa28.15■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms