RNA–Protein interactions for RNA: ENST00000465402.1

KDM5C-209, Transcript of lysine demethylase 5C, humanhuman

TSL 3

Gene KDM5C, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5C-209ENST00000465402 NISCHQ9Y2I1 1504 aa20.99■□□□□ 0.95
KDM5C-209ENST00000465402 ABCC9O60706 1549 aa18.79■□□□□ 0.6
KDM5C-209ENST00000465402 CCDC180Q9P1Z9 1646 aa18.78■□□□□ 0.6
KDM5C-209ENST00000465402 AEBP2Q6ZN18 517 aaPredicted RBP18.49■□□□□ 0.55
KDM5C-209ENST00000465402 RB1CC1Q8TDY2 1594 aa17.83■□□□□ 0.45
KDM5C-209ENST00000465402 CHIC1Q5VXU3 224 aa17.79■□□□□ 0.44
KDM5C-209ENST00000465402 DCAF8L2P0C7V8 631 aa17.73■□□□□ 0.43
KDM5C-209ENST00000465402 NACADO15069 1562 aa17.72■□□□□ 0.43
KDM5C-209ENST00000465402 DNAJC5BQ9UF47 199 aa17.59■□□□□ 0.41
KDM5C-209ENST00000465402 UNC13AQ9UPW8 1703 aa17.55■□□□□ 0.4
KDM5C-209ENST00000465402 PABPN1Q86U42 306 aaKnown RBP eCLIP17.52■□□□□ 0.4
KDM5C-209ENST00000465402 MYO15BQ96JP2 1530 aa17.45■□□□□ 0.38
KDM5C-209ENST00000465402 ZCCHC6Q5VYS8 1495 aaKnown RBP17.41■□□□□ 0.38
KDM5C-209ENST00000465402 BICRAQ9NZM4 1560 aa17.39■□□□□ 0.37
KDM5C-209ENST00000465402 DCAF1Q9Y4B6 1507 aa17.28■□□□□ 0.36
KDM5C-209ENST00000465402 SCRIBQ14160 1630 aa17.2■□□□□ 0.34
KDM5C-209ENST00000465402 SHROOM4Q9ULL8 1493 aa17.01■□□□□ 0.31
KDM5C-209ENST00000465402 CC2D2AQ9P2K1 1620 aa16.96■□□□□ 0.3
KDM5C-209ENST00000465402 EIF4G1Q04637 1599 aaKnown RBP16.93■□□□□ 0.3
KDM5C-209ENST00000465402 CECR2Q9BXF3 1484 aa16.87■□□□□ 0.29
KDM5C-209ENST00000465402 SMARCA4P51532 1647 aa16.38■□□□□ 0.21
KDM5C-209ENST00000465402 NCAPD3P42695 1498 aa16.36■□□□□ 0.21
KDM5C-209ENST00000465402 ATAD2BQ9ULI0 1458 aa16.35■□□□□ 0.21
KDM5C-209ENST00000465402 SMARCA2P51531 1590 aa16.28■□□□□ 0.2
KDM5C-209ENST00000465402 BAZ1AQ9NRL2 1556 aaPredicted RBP16.26■□□□□ 0.19
KDM5C-209ENST00000465402 HMGXB3Q12766 1538 aa16.25■□□□□ 0.19
KDM5C-209ENST00000465402 MROH2BQ7Z745 1585 aa16.22■□□□□ 0.19
KDM5C-209ENST00000465402 BAZ1BQ9UIG0 1483 aaKnown RBP16.2■□□□□ 0.18
KDM5C-209ENST00000465402 NESP48681 1621 aa16.19■□□□□ 0.18
KDM5C-209ENST00000465402 PEG3Q9GZU2 1588 aa16.17■□□□□ 0.18
KDM5C-209ENST00000465402 ERCC6Q03468 1493 aa16.16■□□□□ 0.18
KDM5C-209ENST00000465402 CUX2O14529 1486 aa16.07■□□□□ 0.16
KDM5C-209ENST00000465402 WIZO95785 1651 aa16.05■□□□□ 0.16
KDM5C-209ENST00000465402 DNAJC5Q9H3Z4 198 aa16.01■□□□□ 0.15
KDM5C-209ENST00000465402 LAMC3Q9Y6N6 1575 aa15.99■□□□□ 0.15
KDM5C-209ENST00000465402 KIF21AQ7Z4S6 1674 aa15.98■□□□□ 0.15
KDM5C-209ENST00000465402 THOC2Q8NI27 1593 aaKnown RBP15.97■□□□□ 0.15
KDM5C-209ENST00000465402 SUPT5HO00267 1087 aaKnown RBP15.97■□□□□ 0.15
KDM5C-209ENST00000465402 RSF1Q96T23 1441 aaPredicted RBP15.88■□□□□ 0.13
KDM5C-209ENST00000465402 CADPSQ9ULU8 1353 aa15.87■□□□□ 0.13
KDM5C-209ENST00000465402 PDS5BQ9NTI5 1447 aa15.86■□□□□ 0.13
KDM5C-209ENST00000465402 TOP2AP11388 1531 aaKnown RBP15.78■□□□□ 0.12
KDM5C-209ENST00000465402 MRC2Q9UBG0 1479 aa15.77■□□□□ 0.11
KDM5C-209ENST00000465402 SENP3Q9H4L4 574 aaPredicted RBP15.76■□□□□ 0.11
KDM5C-209ENST00000465402 WDR62O43379 1518 aa15.73■□□□□ 0.11
KDM5C-209ENST00000465402 FANCD2Q9BXW9 1451 aa15.72■□□□□ 0.11
KDM5C-209ENST00000465402 CFTRP13569 1480 aa15.71■□□□□ 0.11
KDM5C-209ENST00000465402 CEP164Q9UPV0 1460 aa15.71■□□□□ 0.11
KDM5C-209ENST00000465402 CCDC88BA6NC98 1476 aa15.63■□□□□ 0.09
KDM5C-209ENST00000465402 URB2Q14146 1524 aaKnown RBP15.62■□□□□ 0.09
KDM5C-209ENST00000465402 PRDM2Q13029 1718 aa15.6■□□□□ 0.09
KDM5C-209ENST00000465402 PHF23Q9BUL5 403 aaPredicted RBP15.59■□□□□ 0.09
KDM5C-209ENST00000465402 TOPBP1Q92547 1522 aa15.44■□□□□ 0.06
KDM5C-209ENST00000465402 ZNF608Q9ULD9 1512 aaPredicted RBP15.43■□□□□ 0.06
KDM5C-209ENST00000465402 TRIM41Q8WV44 630 aa15.4■□□□□ 0.06
KDM5C-209ENST00000465402 IFT140Q96RY7 1462 aa15.39■□□□□ 0.05
KDM5C-209ENST00000465402 DNMBPQ6XZF7 1577 aa15.38■□□□□ 0.05
KDM5C-209ENST00000465402 OSCARQ8IYS5 282 aa15.36■□□□□ 0.05
KDM5C-209ENST00000465402 EIF4G3O43432 1585 aaKnown RBP15.33■□□□□ 0.05
KDM5C-209ENST00000465402 ABCC8Q09428 1581 aa15.32■□□□□ 0.04
KDM5C-209ENST00000465402 TARBP1Q13395 1621 aaKnown RBP15.32■□□□□ 0.04
KDM5C-209ENST00000465402 POLA1P09884 1462 aaPredicted RBP15.29■□□□□ 0.04
KDM5C-209ENST00000465402 AQRO60306 1485 aaKnown RBP eCLIP15.28■□□□□ 0.04
KDM5C-209ENST00000465402 RAD54L2Q9Y4B4 1467 aa15.27■□□□□ 0.04
KDM5C-209ENST00000465402 CHD1O14646 1710 aa15.23■□□□□ 0.03
KDM5C-209ENST00000465402 CUX1P39880 1505 aa15.22■□□□□ 0.03
KDM5C-209ENST00000465402 RIMBP3CA6NJZ7 1639 aa15.22■□□□□ 0.03
KDM5C-209ENST00000465402 RIMBP3BA6NNM3 1639 aa15.22■□□□□ 0.03
KDM5C-209ENST00000465402 RIMBP3Q9UFD9 1639 aa15.22■□□□□ 0.03
KDM5C-209ENST00000465402 FGD5Q6ZNL6 1462 aa15.21■□□□□ 0.03
KDM5C-209ENST00000465402 TDRD9Q8NDG6 1382 aaKnown RBP15.21■□□□□ 0.02
KDM5C-209ENST00000465402 SOGA1O94964 1423 aa15.2■□□□□ 0.02
KDM5C-209ENST00000465402 FBLN2P98095 1184 aa15.16■□□□□ 0.02
KDM5C-209ENST00000465402 ARHGEF11O15085 1522 aa15.16■□□□□ 0.02
KDM5C-209ENST00000465402 WDR97A6NE52 1622 aa15.12■□□□□ 0.01
KDM5C-209ENST00000465402 SNAPC4Q5SXM2 1469 aa15.12■□□□□ 0.01
KDM5C-209ENST00000465402 PBRM1Q86U86 1689 aa15.06■□□□□ 0
KDM5C-209ENST00000465402 GRIN2BQ13224 1484 aa15.05■□□□□ -0
KDM5C-209ENST00000465402 CYB5RLQ6IPT4 315 aa15.04■□□□□ -0
KDM5C-209ENST00000465402 ARAP1Q96P48 1450 aa15.03■□□□□ -0
KDM5C-209ENST00000465402 GAPVD1Q14C86 1478 aa15.02■□□□□ -0
KDM5C-209ENST00000465402 MAGI1Q96QZ7 1491 aaPredicted RBP15.02■□□□□ -0
KDM5C-209ENST00000465402 CHMP7Q8WUX9 453 aaPredicted RBP15.02■□□□□ -0
KDM5C-209ENST00000465402 ABCA5Q8WWZ7 1642 aa15.02□□□□□ -0.01
KDM5C-209ENST00000465402 CLASP1Q7Z460 1538 aa15.02□□□□□ -0.01
KDM5C-209ENST00000465402 SYNJ1O43426 1573 aa15.01□□□□□ -0.01
KDM5C-209ENST00000465402 ABCA10Q8WWZ4 1543 aa15.01□□□□□ -0.01
KDM5C-209ENST00000465402 SYNJ2O15056 1496 aa15□□□□□ -0.01
KDM5C-209ENST00000465402 WRNQ14191 1432 aaPredicted RBP eCLIP14.99□□□□□ -0.01
KDM5C-209ENST00000465402 BIVM-ERCC5R4GMW8 1640 aa14.99□□□□□ -0.01
KDM5C-209ENST00000465402 TOP2BQ02880 1626 aa14.97□□□□□ -0.01
KDM5C-209ENST00000465402 ADAMTS12P58397 1594 aa14.9□□□□□ -0.02
KDM5C-209ENST00000465402 GRIN2AQ12879 1464 aa14.88□□□□□ -0.03
KDM5C-209ENST00000465402 CEP170Q5SW79 1584 aa14.86□□□□□ -0.03
KDM5C-209ENST00000465402 EEA1Q15075 1411 aa14.86□□□□□ -0.03
KDM5C-209ENST00000465402 ERCC6L2Q5T890 1561 aa14.85□□□□□ -0.03
KDM5C-209ENST00000465402 TRHP20396 242 aaPredicted RBP14.85□□□□□ -0.03
KDM5C-209ENST00000465402 NUP160Q12769 1436 aa14.82□□□□□ -0.04
KDM5C-209ENST00000465402 FHAD1B1AJZ9 1412 aa14.81□□□□□ -0.04
KDM5C-209ENST00000465402 ERICH3Q5RHP9 1530 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms