RNA–Protein interactions for RNA: ENST00000465271.5

CNIH4-205, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNIH4, Length 4,125 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-205ENST00000465271 NISCHQ9Y2I1 1504 aa21.98■■□□□ 1.11
CNIH4-205ENST00000465271 CCDC180Q9P1Z9 1646 aa19.59■□□□□ 0.73
CNIH4-205ENST00000465271 ZCCHC6Q5VYS8 1495 aaKnown RBP18.59■□□□□ 0.57
CNIH4-205ENST00000465271 DCAF1Q9Y4B6 1507 aa18.52■□□□□ 0.55
CNIH4-205ENST00000465271 MYO15BQ96JP2 1530 aa18.38■□□□□ 0.53
CNIH4-205ENST00000465271 UNC13AQ9UPW8 1703 aa18■□□□□ 0.47
CNIH4-205ENST00000465271 NACADO15069 1562 aa17.93■□□□□ 0.46
CNIH4-205ENST00000465271 ABCC9O60706 1549 aa17.68■□□□□ 0.42
CNIH4-205ENST00000465271 RB1CC1Q8TDY2 1594 aa17.65■□□□□ 0.42
CNIH4-205ENST00000465271 BICRAQ9NZM4 1560 aa17.6■□□□□ 0.41
CNIH4-205ENST00000465271 SCRIBQ14160 1630 aa17.42■□□□□ 0.38
CNIH4-205ENST00000465271 SHROOM4Q9ULL8 1493 aa17.29■□□□□ 0.36
CNIH4-205ENST00000465271 PEG3Q9GZU2 1588 aa17.14■□□□□ 0.33
CNIH4-205ENST00000465271 SMARCA4P51532 1647 aa17■□□□□ 0.31
CNIH4-205ENST00000465271 CECR2Q9BXF3 1484 aa16.94■□□□□ 0.3
CNIH4-205ENST00000465271 EIF4G1Q04637 1599 aaKnown RBP16.94■□□□□ 0.3
CNIH4-205ENST00000465271 MROH2BQ7Z745 1585 aa16.93■□□□□ 0.3
CNIH4-205ENST00000465271 BAZ1AQ9NRL2 1556 aaPredicted RBP16.89■□□□□ 0.3
CNIH4-205ENST00000465271 RSF1Q96T23 1441 aaPredicted RBP16.86■□□□□ 0.29
CNIH4-205ENST00000465271 WIZO95785 1651 aa16.86■□□□□ 0.29
CNIH4-205ENST00000465271 TOP2AP11388 1531 aaKnown RBP16.68■□□□□ 0.26
CNIH4-205ENST00000465271 HMGXB3Q12766 1538 aa16.64■□□□□ 0.25
CNIH4-205ENST00000465271 SMARCA2P51531 1590 aa16.61■□□□□ 0.25
CNIH4-205ENST00000465271 PRDM2Q13029 1718 aa16.57■□□□□ 0.24
CNIH4-205ENST00000465271 DCAF8L2P0C7V8 631 aa16.55■□□□□ 0.24
CNIH4-205ENST00000465271 ATAD2BQ9ULI0 1458 aa16.55■□□□□ 0.24
CNIH4-205ENST00000465271 NCAPD3P42695 1498 aa16.5■□□□□ 0.23
CNIH4-205ENST00000465271 CC2D2AQ9P2K1 1620 aa16.48■□□□□ 0.23
CNIH4-205ENST00000465271 PABPN1Q86U42 306 aaKnown RBP eCLIP16.33■□□□□ 0.21
CNIH4-205ENST00000465271 CCDC88BA6NC98 1476 aa16.33■□□□□ 0.2
CNIH4-205ENST00000465271 BAZ1BQ9UIG0 1483 aaKnown RBP16.19■□□□□ 0.18
CNIH4-205ENST00000465271 BIVM-ERCC5R4GMW8 1640 aa16.16■□□□□ 0.18
CNIH4-205ENST00000465271 CFTRP13569 1480 aa16.1■□□□□ 0.17
CNIH4-205ENST00000465271 WDR97A6NE52 1622 aa16.04■□□□□ 0.16
CNIH4-205ENST00000465271 SYNJ1O43426 1573 aa16■□□□□ 0.15
CNIH4-205ENST00000465271 LAMC3Q9Y6N6 1575 aa15.99■□□□□ 0.15
CNIH4-205ENST00000465271 TOP2BQ02880 1626 aa15.98■□□□□ 0.15
CNIH4-205ENST00000465271 KIF21AQ7Z4S6 1674 aa15.96■□□□□ 0.15
CNIH4-205ENST00000465271 ABCC8Q09428 1581 aa15.91■□□□□ 0.14
CNIH4-205ENST00000465271 SUPT5HO00267 1087 aaKnown RBP15.89■□□□□ 0.13
CNIH4-205ENST00000465271 CUX1P39880 1505 aa15.87■□□□□ 0.13
CNIH4-205ENST00000465271 THOC2Q8NI27 1593 aaKnown RBP15.84■□□□□ 0.13
CNIH4-205ENST00000465271 DNAJC5BQ9UF47 199 aa15.83■□□□□ 0.13
CNIH4-205ENST00000465271 NESP48681 1621 aa15.76■□□□□ 0.11
CNIH4-205ENST00000465271 CADPSQ9ULU8 1353 aa15.76■□□□□ 0.11
CNIH4-205ENST00000465271 TARBP1Q13395 1621 aaKnown RBP15.76■□□□□ 0.11
CNIH4-205ENST00000465271 CHIC1Q5VXU3 224 aa15.75■□□□□ 0.11
CNIH4-205ENST00000465271 DNMBPQ6XZF7 1577 aa15.73■□□□□ 0.11
CNIH4-205ENST00000465271 WDR62O43379 1518 aa15.71■□□□□ 0.11
CNIH4-205ENST00000465271 URB2Q14146 1524 aaKnown RBP15.7■□□□□ 0.1
CNIH4-205ENST00000465271 ABCA5Q8WWZ7 1642 aa15.7■□□□□ 0.1
CNIH4-205ENST00000465271 FANCD2Q9BXW9 1451 aa15.62■□□□□ 0.09
CNIH4-205ENST00000465271 KIF21BO75037 1637 aa15.61■□□□□ 0.09
CNIH4-205ENST00000465271 TOPBP1Q92547 1522 aa15.6■□□□□ 0.09
CNIH4-205ENST00000465271 WRNQ14191 1432 aaPredicted RBP eCLIP15.6■□□□□ 0.09
CNIH4-205ENST00000465271 RUSC2Q8N2Y8 1516 aa15.54■□□□□ 0.08
CNIH4-205ENST00000465271 PBRM1Q86U86 1689 aa15.54■□□□□ 0.08
CNIH4-205ENST00000465271 CUX2O14529 1486 aa15.53■□□□□ 0.08
CNIH4-205ENST00000465271 ABCA10Q8WWZ4 1543 aa15.53■□□□□ 0.08
CNIH4-205ENST00000465271 POLA1P09884 1462 aaPredicted RBP15.5■□□□□ 0.07
CNIH4-205ENST00000465271 CEP164Q9UPV0 1460 aa15.47■□□□□ 0.07
CNIH4-205ENST00000465271 FGD5Q6ZNL6 1462 aa15.47■□□□□ 0.07
CNIH4-205ENST00000465271 SOGA1O94964 1423 aa15.45■□□□□ 0.06
CNIH4-205ENST00000465271 PRXQ9BXM0 1461 aa15.45■□□□□ 0.06
CNIH4-205ENST00000465271 ERICH3Q5RHP9 1530 aa15.45■□□□□ 0.06
CNIH4-205ENST00000465271 MRC2Q9UBG0 1479 aa15.44■□□□□ 0.06
CNIH4-205ENST00000465271 CUL7Q14999 1698 aa15.4■□□□□ 0.06
CNIH4-205ENST00000465271 EEA1Q15075 1411 aa15.38■□□□□ 0.05
CNIH4-205ENST00000465271 PDS5BQ9NTI5 1447 aa15.37■□□□□ 0.05
CNIH4-205ENST00000465271 CTTNBP2Q8WZ74 1663 aa15.35■□□□□ 0.05
CNIH4-205ENST00000465271 EIF4G3O43432 1585 aaKnown RBP15.35■□□□□ 0.05
CNIH4-205ENST00000465271 ADAMTS12P58397 1594 aa15.33■□□□□ 0.04
CNIH4-205ENST00000465271 RAD54L2Q9Y4B4 1467 aa15.28■□□□□ 0.04
CNIH4-205ENST00000465271 LRRIQ1Q96JM4 1722 aa15.26■□□□□ 0.03
CNIH4-205ENST00000465271 SAMD9Q5K651 1589 aa15.24■□□□□ 0.03
CNIH4-205ENST00000465271 IFT140Q96RY7 1462 aa15.21■□□□□ 0.03
CNIH4-205ENST00000465271 IGF1RP08069 1367 aa15.2■□□□□ 0.02
CNIH4-205ENST00000465271 RAPGEF2Q9Y4G8 1499 aa15.2■□□□□ 0.02
CNIH4-205ENST00000465271 ZNF608Q9ULD9 1512 aaPredicted RBP15.18■□□□□ 0.02
CNIH4-205ENST00000465271 SHROOM2Q13796 1616 aa15.17■□□□□ 0.02
CNIH4-205ENST00000465271 CEP170Q5SW79 1584 aa15.1■□□□□ 0.01
CNIH4-205ENST00000465271 KIF27Q86VH2 1401 aa15.1■□□□□ 0.01
CNIH4-205ENST00000465271 CHD1O14646 1710 aa15.1■□□□□ 0.01
CNIH4-205ENST00000465271 GOLGA3Q08378 1498 aa15.1■□□□□ 0.01
CNIH4-205ENST00000465271 TNIKQ9UKE5 1360 aa15.08■□□□□ 0
CNIH4-205ENST00000465271 GAPVD1Q14C86 1478 aa15.08■□□□□ 0
CNIH4-205ENST00000465271 TRIM41Q8WV44 630 aa15.07■□□□□ 0
CNIH4-205ENST00000465271 ARAP1Q96P48 1450 aa15.05■□□□□ 0
CNIH4-205ENST00000465271 CLASP1Q7Z460 1538 aa15.03■□□□□ -0
CNIH4-205ENST00000465271 MAGI1Q96QZ7 1491 aaPredicted RBP15.03■□□□□ -0
CNIH4-205ENST00000465271 CFAP43Q8NDM7 1665 aa15.02■□□□□ -0
CNIH4-205ENST00000465271 GRIN2BQ13224 1484 aa15□□□□□ -0.01
CNIH4-205ENST00000465271 UGGT2Q9NYU1 1516 aa15□□□□□ -0.01
CNIH4-205ENST00000465271 NUP160Q12769 1436 aa14.99□□□□□ -0.01
CNIH4-205ENST00000465271 ARHGAP35Q9NRY4 1499 aa14.98□□□□□ -0.01
CNIH4-205ENST00000465271 AQRO60306 1485 aaKnown RBP eCLIP14.96□□□□□ -0.01
CNIH4-205ENST00000465271 EFCAB5A4FU69 1503 aa14.95□□□□□ -0.02
CNIH4-205ENST00000465271 FHAD1B1AJZ9 1412 aa14.95□□□□□ -0.02
CNIH4-205ENST00000465271 SNAPC4Q5SXM2 1469 aa14.95□□□□□ -0.02
CNIH4-205ENST00000465271 GRIN2AQ12879 1464 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms