RNA–Protein interactions for RNA: ENST00000465208.5

EPHA1-203, Transcript of EPH receptor A1, humanhuman

TSL 2

Gene EPHA1, Length 686 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA1-203ENST00000465208 NISCHQ9Y2I1 1504 aa24.84■■□□□ 1.57
EPHA1-203ENST00000465208 ABCC9O60706 1549 aa22.52■■□□□ 1.2
EPHA1-203ENST00000465208 CCDC180Q9P1Z9 1646 aa22.44■■□□□ 1.18
EPHA1-203ENST00000465208 RB1CC1Q8TDY2 1594 aa21.43■■□□□ 1.02
EPHA1-203ENST00000465208 NACADO15069 1562 aa21.23■□□□□ 0.99
EPHA1-203ENST00000465208 DNAJC5BQ9UF47 199 aa21.22■□□□□ 0.99
EPHA1-203ENST00000465208 DCAF8L2P0C7V8 631 aa21.06■□□□□ 0.96
EPHA1-203ENST00000465208 UNC13AQ9UPW8 1703 aa21■□□□□ 0.95
EPHA1-203ENST00000465208 PABPN1Q86U42 306 aaKnown RBP eCLIP20.92■□□□□ 0.94
EPHA1-203ENST00000465208 MYO15BQ96JP2 1530 aa20.85■□□□□ 0.93
EPHA1-203ENST00000465208 BICRAQ9NZM4 1560 aa20.76■□□□□ 0.91
EPHA1-203ENST00000465208 ZCCHC6Q5VYS8 1495 aaKnown RBP20.53■□□□□ 0.88
EPHA1-203ENST00000465208 DCAF1Q9Y4B6 1507 aa20.52■□□□□ 0.87
EPHA1-203ENST00000465208 SHROOM4Q9ULL8 1493 aa20.49■□□□□ 0.87
EPHA1-203ENST00000465208 SCRIBQ14160 1630 aa20.38■□□□□ 0.85
EPHA1-203ENST00000465208 CC2D2AQ9P2K1 1620 aa20.38■□□□□ 0.85
EPHA1-203ENST00000465208 CECR2Q9BXF3 1484 aa20.31■□□□□ 0.84
EPHA1-203ENST00000465208 EIF4G1Q04637 1599 aaKnown RBP20.28■□□□□ 0.84
EPHA1-203ENST00000465208 DNAJC5Q9H3Z4 198 aa19.67■□□□□ 0.74
EPHA1-203ENST00000465208 NCAPD3P42695 1498 aa19.55■□□□□ 0.72
EPHA1-203ENST00000465208 CUX2O14529 1486 aa19.51■□□□□ 0.71
EPHA1-203ENST00000465208 ERCC6Q03468 1493 aa19.5■□□□□ 0.71
EPHA1-203ENST00000465208 ATAD2BQ9ULI0 1458 aa19.46■□□□□ 0.71
EPHA1-203ENST00000465208 SMARCA2P51531 1590 aa19.44■□□□□ 0.7
EPHA1-203ENST00000465208 SMARCA4P51532 1647 aa19.44■□□□□ 0.7
EPHA1-203ENST00000465208 HMGXB3Q12766 1538 aa19.41■□□□□ 0.7
EPHA1-203ENST00000465208 BAZ1AQ9NRL2 1556 aaPredicted RBP19.32■□□□□ 0.68
EPHA1-203ENST00000465208 NESP48681 1621 aa19.29■□□□□ 0.68
EPHA1-203ENST00000465208 BAZ1BQ9UIG0 1483 aaKnown RBP19.29■□□□□ 0.68
EPHA1-203ENST00000465208 PEG3Q9GZU2 1588 aa19.24■□□□□ 0.67
EPHA1-203ENST00000465208 LAMC3Q9Y6N6 1575 aa19.19■□□□□ 0.66
EPHA1-203ENST00000465208 THOC2Q8NI27 1593 aaKnown RBP19.16■□□□□ 0.66
EPHA1-203ENST00000465208 KIF21AQ7Z4S6 1674 aa19.12■□□□□ 0.65
EPHA1-203ENST00000465208 MROH2BQ7Z745 1585 aa19.12■□□□□ 0.65
EPHA1-203ENST00000465208 PDS5BQ9NTI5 1447 aa19.07■□□□□ 0.64
EPHA1-203ENST00000465208 CADPSQ9ULU8 1353 aa18.94■□□□□ 0.62
EPHA1-203ENST00000465208 WIZO95785 1651 aa18.94■□□□□ 0.62
EPHA1-203ENST00000465208 MRC2Q9UBG0 1479 aa18.9■□□□□ 0.62
EPHA1-203ENST00000465208 WDR62O43379 1518 aa18.86■□□□□ 0.61
EPHA1-203ENST00000465208 CEP164Q9UPV0 1460 aa18.8■□□□□ 0.6
EPHA1-203ENST00000465208 TRIM41Q8WV44 630 aa18.75■□□□□ 0.59
EPHA1-203ENST00000465208 FANCD2Q9BXW9 1451 aa18.75■□□□□ 0.59
EPHA1-203ENST00000465208 CFTRP13569 1480 aa18.7■□□□□ 0.58
EPHA1-203ENST00000465208 TOP2AP11388 1531 aaKnown RBP18.65■□□□□ 0.58
EPHA1-203ENST00000465208 RSF1Q96T23 1441 aaPredicted RBP18.65■□□□□ 0.58
EPHA1-203ENST00000465208 PRDM2Q13029 1718 aa18.64■□□□□ 0.57
EPHA1-203ENST00000465208 OSCARQ8IYS5 282 aa18.6■□□□□ 0.57
EPHA1-203ENST00000465208 URB2Q14146 1524 aaKnown RBP18.59■□□□□ 0.57
EPHA1-203ENST00000465208 CCDC88BA6NC98 1476 aa18.43■□□□□ 0.54
EPHA1-203ENST00000465208 IFT140Q96RY7 1462 aa18.42■□□□□ 0.54
EPHA1-203ENST00000465208 RIMBP3CA6NJZ7 1639 aa18.39■□□□□ 0.53
EPHA1-203ENST00000465208 RIMBP3BA6NNM3 1639 aa18.39■□□□□ 0.53
EPHA1-203ENST00000465208 RIMBP3Q9UFD9 1639 aa18.39■□□□□ 0.53
EPHA1-203ENST00000465208 ZNF608Q9ULD9 1512 aaPredicted RBP18.38■□□□□ 0.53
EPHA1-203ENST00000465208 TOPBP1Q92547 1522 aa18.37■□□□□ 0.53
EPHA1-203ENST00000465208 ABCC8Q09428 1581 aa18.37■□□□□ 0.53
EPHA1-203ENST00000465208 EIF4G3O43432 1585 aaKnown RBP18.32■□□□□ 0.52
EPHA1-203ENST00000465208 DNMBPQ6XZF7 1577 aa18.31■□□□□ 0.52
EPHA1-203ENST00000465208 ARHGEF11O15085 1522 aa18.28■□□□□ 0.52
EPHA1-203ENST00000465208 CHD1O14646 1710 aa18.27■□□□□ 0.52
EPHA1-203ENST00000465208 TARBP1Q13395 1621 aaKnown RBP18.24■□□□□ 0.51
EPHA1-203ENST00000465208 SUPT5HO00267 1087 aaKnown RBP18.24■□□□□ 0.51
EPHA1-203ENST00000465208 AQRO60306 1485 aaKnown RBP eCLIP18.19■□□□□ 0.5
EPHA1-203ENST00000465208 POLA1P09884 1462 aaPredicted RBP18.16■□□□□ 0.5
EPHA1-203ENST00000465208 CYB5RLQ6IPT4 315 aa18.16■□□□□ 0.5
EPHA1-203ENST00000465208 FBLN2P98095 1184 aa18.15■□□□□ 0.5
EPHA1-203ENST00000465208 SOGA1O94964 1423 aa18.09■□□□□ 0.49
EPHA1-203ENST00000465208 WDR97A6NE52 1622 aa18.09■□□□□ 0.49
EPHA1-203ENST00000465208 RAD54L2Q9Y4B4 1467 aa18.08■□□□□ 0.49
EPHA1-203ENST00000465208 ARAP1Q96P48 1450 aa18.07■□□□□ 0.48
EPHA1-203ENST00000465208 TDRD9Q8NDG6 1382 aaKnown RBP18.05■□□□□ 0.48
EPHA1-203ENST00000465208 TRHP20396 242 aaPredicted RBP18.04■□□□□ 0.48
EPHA1-203ENST00000465208 FGD5Q6ZNL6 1462 aa18.03■□□□□ 0.48
EPHA1-203ENST00000465208 SNAPC4Q5SXM2 1469 aa18.01■□□□□ 0.47
EPHA1-203ENST00000465208 SYNJ1O43426 1573 aa18■□□□□ 0.47
EPHA1-203ENST00000465208 CUX1P39880 1505 aa17.98■□□□□ 0.47
EPHA1-203ENST00000465208 CHMP7Q8WUX9 453 aaPredicted RBP17.98■□□□□ 0.47
EPHA1-203ENST00000465208 MAGI1Q96QZ7 1491 aaPredicted RBP17.98■□□□□ 0.47
EPHA1-203ENST00000465208 CLASP1Q7Z460 1538 aa17.98■□□□□ 0.47
EPHA1-203ENST00000465208 PBRM1Q86U86 1689 aa17.96■□□□□ 0.47
EPHA1-203ENST00000465208 GRIN2BQ13224 1484 aa17.95■□□□□ 0.46
EPHA1-203ENST00000465208 SYNJ2O15056 1496 aa17.92■□□□□ 0.46
EPHA1-203ENST00000465208 GAPVD1Q14C86 1478 aa17.88■□□□□ 0.45
EPHA1-203ENST00000465208 ABCA5Q8WWZ7 1642 aa17.83■□□□□ 0.45
EPHA1-203ENST00000465208 ABCA10Q8WWZ4 1543 aa17.82■□□□□ 0.44
EPHA1-203ENST00000465208 WRNQ14191 1432 aaPredicted RBP eCLIP17.72■□□□□ 0.43
EPHA1-203ENST00000465208 GRIN2AQ12879 1464 aa17.72■□□□□ 0.43
EPHA1-203ENST00000465208 ADAMTS12P58397 1594 aa17.7■□□□□ 0.42
EPHA1-203ENST00000465208 BIVM-ERCC5R4GMW8 1640 aa17.7■□□□□ 0.42
EPHA1-203ENST00000465208 TOP2BQ02880 1626 aa17.69■□□□□ 0.42
EPHA1-203ENST00000465208 CEP170Q5SW79 1584 aa17.67■□□□□ 0.42
EPHA1-203ENST00000465208 AEBP2Q6ZN18 517 aaPredicted RBP17.67■□□□□ 0.42
EPHA1-203ENST00000465208 ERCC6L2Q5T890 1561 aa17.66■□□□□ 0.42
EPHA1-203ENST00000465208 NUP160Q12769 1436 aa17.64■□□□□ 0.42
EPHA1-203ENST00000465208 SHROOM2Q13796 1616 aa17.64■□□□□ 0.41
EPHA1-203ENST00000465208 FHAD1B1AJZ9 1412 aa17.63■□□□□ 0.41
EPHA1-203ENST00000465208 ERICH3Q5RHP9 1530 aa17.62■□□□□ 0.41
EPHA1-203ENST00000465208 CHIC1Q5VXU3 224 aa17.57■□□□□ 0.4
EPHA1-203ENST00000465208 KIF13AQ9H1H9 1805 aa17.55■□□□□ 0.4
EPHA1-203ENST00000465208 PRG4Q92954 1404 aaPredicted RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms