RNA–Protein interactions for RNA: ENST00000465023.1

IFT27-207, Transcript of intraflagellar transport 27, humanhuman

TSL 5

Gene IFT27, Length 406 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT27-207ENST00000465023 NISCHQ9Y2I1 1504 aa21.64■■□□□ 1.05
IFT27-207ENST00000465023 ABCC9O60706 1549 aa20.1■□□□□ 0.81
IFT27-207ENST00000465023 CCDC180Q9P1Z9 1646 aa19.78■□□□□ 0.76
IFT27-207ENST00000465023 DNAJC5BQ9UF47 199 aa19.1■□□□□ 0.65
IFT27-207ENST00000465023 RB1CC1Q8TDY2 1594 aa18.95■□□□□ 0.62
IFT27-207ENST00000465023 UNC13AQ9UPW8 1703 aa18.74■□□□□ 0.59
IFT27-207ENST00000465023 NACADO15069 1562 aa18.66■□□□□ 0.58
IFT27-207ENST00000465023 PABPN1Q86U42 306 aaKnown RBP eCLIP18.52■□□□□ 0.56
IFT27-207ENST00000465023 BICRAQ9NZM4 1560 aa18.45■□□□□ 0.54
IFT27-207ENST00000465023 DCAF8L2P0C7V8 631 aa18.3■□□□□ 0.52
IFT27-207ENST00000465023 MYO15BQ96JP2 1530 aa18.2■□□□□ 0.5
IFT27-207ENST00000465023 CC2D2AQ9P2K1 1620 aa18.2■□□□□ 0.5
IFT27-207ENST00000465023 CECR2Q9BXF3 1484 aa18.13■□□□□ 0.49
IFT27-207ENST00000465023 SHROOM4Q9ULL8 1493 aa18.07■□□□□ 0.48
IFT27-207ENST00000465023 EIF4G1Q04637 1599 aaKnown RBP18.03■□□□□ 0.48
IFT27-207ENST00000465023 SCRIBQ14160 1630 aa18■□□□□ 0.47
IFT27-207ENST00000465023 ZCCHC6Q5VYS8 1495 aaKnown RBP17.89■□□□□ 0.45
IFT27-207ENST00000465023 DNAJC5Q9H3Z4 198 aa17.82■□□□□ 0.44
IFT27-207ENST00000465023 DCAF1Q9Y4B6 1507 aa17.82■□□□□ 0.44
IFT27-207ENST00000465023 CUX2O14529 1486 aa17.48■□□□□ 0.39
IFT27-207ENST00000465023 ERCC6Q03468 1493 aa17.38■□□□□ 0.37
IFT27-207ENST00000465023 THOC2Q8NI27 1593 aaKnown RBP17.19■□□□□ 0.34
IFT27-207ENST00000465023 NESP48681 1621 aa17.16■□□□□ 0.34
IFT27-207ENST00000465023 NCAPD3P42695 1498 aa17.14■□□□□ 0.33
IFT27-207ENST00000465023 HMGXB3Q12766 1538 aa17.12■□□□□ 0.33
IFT27-207ENST00000465023 ATAD2BQ9ULI0 1458 aa17.09■□□□□ 0.33
IFT27-207ENST00000465023 SMARCA4P51532 1647 aa17.09■□□□□ 0.33
IFT27-207ENST00000465023 KIF21AQ7Z4S6 1674 aa17.08■□□□□ 0.32
IFT27-207ENST00000465023 SMARCA2P51531 1590 aa17.06■□□□□ 0.32
IFT27-207ENST00000465023 LAMC3Q9Y6N6 1575 aa16.96■□□□□ 0.31
IFT27-207ENST00000465023 BAZ1BQ9UIG0 1483 aaKnown RBP16.95■□□□□ 0.3
IFT27-207ENST00000465023 TRIM41Q8WV44 630 aa16.95■□□□□ 0.3
IFT27-207ENST00000465023 PEG3Q9GZU2 1588 aa16.86■□□□□ 0.29
IFT27-207ENST00000465023 BAZ1AQ9NRL2 1556 aaPredicted RBP16.86■□□□□ 0.29
IFT27-207ENST00000465023 WDR62O43379 1518 aa16.76■□□□□ 0.27
IFT27-207ENST00000465023 PDS5BQ9NTI5 1447 aa16.75■□□□□ 0.27
IFT27-207ENST00000465023 MRC2Q9UBG0 1479 aa16.74■□□□□ 0.27
IFT27-207ENST00000465023 MROH2BQ7Z745 1585 aa16.7■□□□□ 0.26
IFT27-207ENST00000465023 CEP164Q9UPV0 1460 aa16.59■□□□□ 0.25
IFT27-207ENST00000465023 CADPSQ9ULU8 1353 aa16.58■□□□□ 0.24
IFT27-207ENST00000465023 WIZO95785 1651 aa16.56■□□□□ 0.24
IFT27-207ENST00000465023 RIMBP3CA6NJZ7 1639 aa16.56■□□□□ 0.24
IFT27-207ENST00000465023 RIMBP3BA6NNM3 1639 aa16.56■□□□□ 0.24
IFT27-207ENST00000465023 RIMBP3Q9UFD9 1639 aa16.56■□□□□ 0.24
IFT27-207ENST00000465023 FANCD2Q9BXW9 1451 aa16.5■□□□□ 0.23
IFT27-207ENST00000465023 PRDM2Q13029 1718 aa16.47■□□□□ 0.23
IFT27-207ENST00000465023 URB2Q14146 1524 aaKnown RBP16.43■□□□□ 0.22
IFT27-207ENST00000465023 OSCARQ8IYS5 282 aa16.42■□□□□ 0.22
IFT27-207ENST00000465023 ARHGEF11O15085 1522 aa16.4■□□□□ 0.22
IFT27-207ENST00000465023 CFTRP13569 1480 aa16.35■□□□□ 0.21
IFT27-207ENST00000465023 CHD1O14646 1710 aa16.33■□□□□ 0.21
IFT27-207ENST00000465023 EIF4G3O43432 1585 aaKnown RBP16.31■□□□□ 0.2
IFT27-207ENST00000465023 ZNF608Q9ULD9 1512 aaPredicted RBP16.29■□□□□ 0.2
IFT27-207ENST00000465023 TOP2AP11388 1531 aaKnown RBP16.28■□□□□ 0.2
IFT27-207ENST00000465023 IFT140Q96RY7 1462 aa16.22■□□□□ 0.19
IFT27-207ENST00000465023 ARAP1Q96P48 1450 aa16.21■□□□□ 0.19
IFT27-207ENST00000465023 TOPBP1Q92547 1522 aa16.16■□□□□ 0.18
IFT27-207ENST00000465023 CYB5RLQ6IPT4 315 aa16.12■□□□□ 0.17
IFT27-207ENST00000465023 TRHP20396 242 aaPredicted RBP16.11■□□□□ 0.17
IFT27-207ENST00000465023 DNMBPQ6XZF7 1577 aa16.11■□□□□ 0.17
IFT27-207ENST00000465023 TARBP1Q13395 1621 aaKnown RBP16.11■□□□□ 0.17
IFT27-207ENST00000465023 RSF1Q96T23 1441 aaPredicted RBP16.1■□□□□ 0.17
IFT27-207ENST00000465023 AQRO60306 1485 aaKnown RBP eCLIP16.03■□□□□ 0.16
IFT27-207ENST00000465023 CLASP1Q7Z460 1538 aa16■□□□□ 0.15
IFT27-207ENST00000465023 CCDC88BA6NC98 1476 aa16■□□□□ 0.15
IFT27-207ENST00000465023 ABCC8Q09428 1581 aa15.99■□□□□ 0.15
IFT27-207ENST00000465023 POLA1P09884 1462 aaPredicted RBP15.97■□□□□ 0.15
IFT27-207ENST00000465023 AEBP2Q6ZN18 517 aaPredicted RBP15.96■□□□□ 0.15
IFT27-207ENST00000465023 FBLN2P98095 1184 aa15.94■□□□□ 0.14
IFT27-207ENST00000465023 SNAPC4Q5SXM2 1469 aa15.94■□□□□ 0.14
IFT27-207ENST00000465023 SYNJ1O43426 1573 aa15.94■□□□□ 0.14
IFT27-207ENST00000465023 PBRM1Q86U86 1689 aa15.9■□□□□ 0.14
IFT27-207ENST00000465023 RAD54L2Q9Y4B4 1467 aa15.9■□□□□ 0.14
IFT27-207ENST00000465023 WDR97A6NE52 1622 aa15.89■□□□□ 0.13
IFT27-207ENST00000465023 MAGI1Q96QZ7 1491 aaPredicted RBP15.83■□□□□ 0.12
IFT27-207ENST00000465023 TDRD9Q8NDG6 1382 aaKnown RBP15.82■□□□□ 0.12
IFT27-207ENST00000465023 FGD5Q6ZNL6 1462 aa15.82■□□□□ 0.12
IFT27-207ENST00000465023 GAPVD1Q14C86 1478 aa15.78■□□□□ 0.12
IFT27-207ENST00000465023 SYNJ2O15056 1496 aa15.78■□□□□ 0.12
IFT27-207ENST00000465023 SOGA1O94964 1423 aa15.77■□□□□ 0.12
IFT27-207ENST00000465023 KIF13AQ9H1H9 1805 aa15.77■□□□□ 0.11
IFT27-207ENST00000465023 GRIN2BQ13224 1484 aa15.75■□□□□ 0.11
IFT27-207ENST00000465023 ERCC6L2Q5T890 1561 aa15.75■□□□□ 0.11
IFT27-207ENST00000465023 CUX1P39880 1505 aa15.74■□□□□ 0.11
IFT27-207ENST00000465023 ABCA5Q8WWZ7 1642 aa15.72■□□□□ 0.11
IFT27-207ENST00000465023 CHMP7Q8WUX9 453 aaPredicted RBP15.71■□□□□ 0.11
IFT27-207ENST00000465023 CEP170Q5SW79 1584 aa15.65■□□□□ 0.1
IFT27-207ENST00000465023 ADAMTS12P58397 1594 aa15.64■□□□□ 0.09
IFT27-207ENST00000465023 SHROOM2Q13796 1616 aa15.62■□□□□ 0.09
IFT27-207ENST00000465023 GRIN2AQ12879 1464 aa15.59■□□□□ 0.09
IFT27-207ENST00000465023 ABCA10Q8WWZ4 1543 aa15.57■□□□□ 0.08
IFT27-207ENST00000465023 NUP160Q12769 1436 aa15.52■□□□□ 0.08
IFT27-207ENST00000465023 TSPOAP1O95153 1857 aa15.5■□□□□ 0.07
IFT27-207ENST00000465023 DIP2BQ9P265 1576 aa15.49■□□□□ 0.07
IFT27-207ENST00000465023 KDM6BO15054 1643 aa15.48■□□□□ 0.07
IFT27-207ENST00000465023 RUSC2Q8N2Y8 1516 aa15.45■□□□□ 0.06
IFT27-207ENST00000465023 BIVM-ERCC5R4GMW8 1640 aa15.44■□□□□ 0.06
IFT27-207ENST00000465023 ADCY10Q96PN6 1610 aa15.43■□□□□ 0.06
IFT27-207ENST00000465023 MAPKBP1O60336 1514 aa15.42■□□□□ 0.06
IFT27-207ENST00000465023 ABCC10Q5T3U5 1492 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms