RNA–Protein interactions for RNA: ENST00000465007.1

ATP1A3-203, Transcript of ATPase Na+/K+ transporting subunit alpha 3, humanhuman

TSL 3

Gene ATP1A3, Length 255 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A3-203ENST00000465007 NISCHQ9Y2I1 1504 aa37.36■■■■□ 3.57
ATP1A3-203ENST00000465007 ABCC9O60706 1549 aa33.74■■■□□ 2.99
ATP1A3-203ENST00000465007 CCDC180Q9P1Z9 1646 aa33.49■■■□□ 2.95
ATP1A3-203ENST00000465007 RB1CC1Q8TDY2 1594 aa32.07■■■□□ 2.72
ATP1A3-203ENST00000465007 DCAF8L2P0C7V8 631 aa31.97■■■□□ 2.71
ATP1A3-203ENST00000465007 NACADO15069 1562 aa31.8■■■□□ 2.68
ATP1A3-203ENST00000465007 DNAJC5BQ9UF47 199 aa31.68■■■□□ 2.66
ATP1A3-203ENST00000465007 PABPN1Q86U42 306 aaKnown RBP eCLIP31.5■■■□□ 2.63
ATP1A3-203ENST00000465007 MYO15BQ96JP2 1530 aa31.28■■■□□ 2.6
ATP1A3-203ENST00000465007 UNC13AQ9UPW8 1703 aa31.04■■■□□ 2.56
ATP1A3-203ENST00000465007 BICRAQ9NZM4 1560 aa30.93■■■□□ 2.54
ATP1A3-203ENST00000465007 ZCCHC6Q5VYS8 1495 aaKnown RBP30.89■■■□□ 2.54
ATP1A3-203ENST00000465007 DCAF1Q9Y4B6 1507 aa30.83■■■□□ 2.53
ATP1A3-203ENST00000465007 SHROOM4Q9ULL8 1493 aa30.68■■■□□ 2.5
ATP1A3-203ENST00000465007 SCRIBQ14160 1630 aa30.58■■■□□ 2.49
ATP1A3-203ENST00000465007 CECR2Q9BXF3 1484 aa30.43■■■□□ 2.46
ATP1A3-203ENST00000465007 CC2D2AQ9P2K1 1620 aa30.38■■■□□ 2.45
ATP1A3-203ENST00000465007 EIF4G1Q04637 1599 aaKnown RBP30.3■■■□□ 2.44
ATP1A3-203ENST00000465007 NCAPD3P42695 1498 aa29.36■■■□□ 2.29
ATP1A3-203ENST00000465007 DNAJC5Q9H3Z4 198 aa29.3■■■□□ 2.28
ATP1A3-203ENST00000465007 ERCC6Q03468 1493 aa29.27■■■□□ 2.28
ATP1A3-203ENST00000465007 ATAD2BQ9ULI0 1458 aa29.24■■■□□ 2.27
ATP1A3-203ENST00000465007 SMARCA2P51531 1590 aa29.2■■■□□ 2.26
ATP1A3-203ENST00000465007 CUX2O14529 1486 aa29.12■■■□□ 2.25
ATP1A3-203ENST00000465007 SMARCA4P51532 1647 aa29.12■■■□□ 2.25
ATP1A3-203ENST00000465007 HMGXB3Q12766 1538 aa29.08■■■□□ 2.25
ATP1A3-203ENST00000465007 BAZ1AQ9NRL2 1556 aaPredicted RBP29.06■■■□□ 2.24
ATP1A3-203ENST00000465007 BAZ1BQ9UIG0 1483 aaKnown RBP29.04■■■□□ 2.24
ATP1A3-203ENST00000465007 NESP48681 1621 aa28.87■■■□□ 2.21
ATP1A3-203ENST00000465007 PEG3Q9GZU2 1588 aa28.8■■■□□ 2.2
ATP1A3-203ENST00000465007 MROH2BQ7Z745 1585 aa28.75■■■□□ 2.19
ATP1A3-203ENST00000465007 LAMC3Q9Y6N6 1575 aa28.71■■■□□ 2.19
ATP1A3-203ENST00000465007 PDS5BQ9NTI5 1447 aa28.69■■■□□ 2.18
ATP1A3-203ENST00000465007 CADPSQ9ULU8 1353 aa28.54■■■□□ 2.16
ATP1A3-203ENST00000465007 THOC2Q8NI27 1593 aaKnown RBP28.5■■■□□ 2.15
ATP1A3-203ENST00000465007 KIF21AQ7Z4S6 1674 aa28.41■■■□□ 2.14
ATP1A3-203ENST00000465007 WIZO95785 1651 aa28.38■■■□□ 2.13
ATP1A3-203ENST00000465007 MRC2Q9UBG0 1479 aa28.34■■■□□ 2.13
ATP1A3-203ENST00000465007 CEP164Q9UPV0 1460 aa28.24■■■□□ 2.11
ATP1A3-203ENST00000465007 RSF1Q96T23 1441 aaPredicted RBP28.19■■■□□ 2.1
ATP1A3-203ENST00000465007 WDR62O43379 1518 aa28.18■■■□□ 2.1
ATP1A3-203ENST00000465007 FANCD2Q9BXW9 1451 aa28.18■■■□□ 2.1
ATP1A3-203ENST00000465007 CFTRP13569 1480 aa28.11■■■□□ 2.09
ATP1A3-203ENST00000465007 TRIM41Q8WV44 630 aa28.1■■■□□ 2.09
ATP1A3-203ENST00000465007 TOP2AP11388 1531 aaKnown RBP28.07■■■□□ 2.08
ATP1A3-203ENST00000465007 OSCARQ8IYS5 282 aa27.97■■■□□ 2.07
ATP1A3-203ENST00000465007 URB2Q14146 1524 aaKnown RBP27.86■■■□□ 2.05
ATP1A3-203ENST00000465007 CCDC88BA6NC98 1476 aa27.8■■■□□ 2.04
ATP1A3-203ENST00000465007 IFT140Q96RY7 1462 aa27.69■■■□□ 2.02
ATP1A3-203ENST00000465007 ABCC8Q09428 1581 aa27.65■■■□□ 2.02
ATP1A3-203ENST00000465007 PRDM2Q13029 1718 aa27.64■■■□□ 2.01
ATP1A3-203ENST00000465007 TOPBP1Q92547 1522 aa27.58■■■□□ 2.01
ATP1A3-203ENST00000465007 ZNF608Q9ULD9 1512 aaPredicted RBP27.55■■■□□ 2
ATP1A3-203ENST00000465007 DNMBPQ6XZF7 1577 aa27.47■■□□□ 1.99
ATP1A3-203ENST00000465007 FBLN2P98095 1184 aa27.46■■□□□ 1.99
ATP1A3-203ENST00000465007 AQRO60306 1485 aaKnown RBP eCLIP27.37■■□□□ 1.97
ATP1A3-203ENST00000465007 EIF4G3O43432 1585 aaKnown RBP27.35■■□□□ 1.97
ATP1A3-203ENST00000465007 RIMBP3CA6NJZ7 1639 aa27.33■■□□□ 1.97
ATP1A3-203ENST00000465007 RIMBP3BA6NNM3 1639 aa27.33■■□□□ 1.97
ATP1A3-203ENST00000465007 RIMBP3Q9UFD9 1639 aa27.33■■□□□ 1.97
ATP1A3-203ENST00000465007 CYB5RLQ6IPT4 315 aa27.31■■□□□ 1.96
ATP1A3-203ENST00000465007 SOGA1O94964 1423 aa27.3■■□□□ 1.96
ATP1A3-203ENST00000465007 POLA1P09884 1462 aaPredicted RBP27.29■■□□□ 1.96
ATP1A3-203ENST00000465007 ARHGEF11O15085 1522 aa27.29■■□□□ 1.96
ATP1A3-203ENST00000465007 TDRD9Q8NDG6 1382 aaKnown RBP27.24■■□□□ 1.95
ATP1A3-203ENST00000465007 TARBP1Q13395 1621 aaKnown RBP27.24■■□□□ 1.95
ATP1A3-203ENST00000465007 RAD54L2Q9Y4B4 1467 aa27.22■■□□□ 1.95
ATP1A3-203ENST00000465007 CHMP7Q8WUX9 453 aaPredicted RBP27.2■■□□□ 1.94
ATP1A3-203ENST00000465007 TRHP20396 242 aaPredicted RBP27.15■■□□□ 1.94
ATP1A3-203ENST00000465007 FGD5Q6ZNL6 1462 aa27.13■■□□□ 1.93
ATP1A3-203ENST00000465007 SUPT5HO00267 1087 aaKnown RBP27.13■■□□□ 1.93
ATP1A3-203ENST00000465007 CHD1O14646 1710 aa27.12■■□□□ 1.93
ATP1A3-203ENST00000465007 SNAPC4Q5SXM2 1469 aa27.06■■□□□ 1.92
ATP1A3-203ENST00000465007 WDR97A6NE52 1622 aa27.05■■□□□ 1.92
ATP1A3-203ENST00000465007 GRIN2BQ13224 1484 aa27.03■■□□□ 1.92
ATP1A3-203ENST00000465007 CUX1P39880 1505 aa27.02■■□□□ 1.92
ATP1A3-203ENST00000465007 MAGI1Q96QZ7 1491 aaPredicted RBP27.01■■□□□ 1.91
ATP1A3-203ENST00000465007 ARAP1Q96P48 1450 aa26.98■■□□□ 1.91
ATP1A3-203ENST00000465007 SYNJ1O43426 1573 aa26.96■■□□□ 1.91
ATP1A3-203ENST00000465007 SYNJ2O15056 1496 aa26.93■■□□□ 1.9
ATP1A3-203ENST00000465007 GAPVD1Q14C86 1478 aa26.92■■□□□ 1.9
ATP1A3-203ENST00000465007 CLASP1Q7Z460 1538 aa26.84■■□□□ 1.89
ATP1A3-203ENST00000465007 WRNQ14191 1432 aaPredicted RBP eCLIP26.82■■□□□ 1.88
ATP1A3-203ENST00000465007 ABCA10Q8WWZ4 1543 aa26.8■■□□□ 1.88
ATP1A3-203ENST00000465007 PBRM1Q86U86 1689 aa26.73■■□□□ 1.87
ATP1A3-203ENST00000465007 ABCA5Q8WWZ7 1642 aa26.67■■□□□ 1.86
ATP1A3-203ENST00000465007 GRIN2AQ12879 1464 aa26.63■■□□□ 1.85
ATP1A3-203ENST00000465007 FHAD1B1AJZ9 1412 aa26.59■■□□□ 1.85
ATP1A3-203ENST00000465007 TOP2BQ02880 1626 aa26.57■■□□□ 1.84
ATP1A3-203ENST00000465007 BIVM-ERCC5R4GMW8 1640 aa26.51■■□□□ 1.83
ATP1A3-203ENST00000465007 ADAMTS12P58397 1594 aa26.51■■□□□ 1.83
ATP1A3-203ENST00000465007 NUP160Q12769 1436 aa26.5■■□□□ 1.83
ATP1A3-203ENST00000465007 AEBP2Q6ZN18 517 aaPredicted RBP26.5■■□□□ 1.83
ATP1A3-203ENST00000465007 ERICH3Q5RHP9 1530 aa26.48■■□□□ 1.83
ATP1A3-203ENST00000465007 CEP170Q5SW79 1584 aa26.45■■□□□ 1.82
ATP1A3-203ENST00000465007 JPH4Q96JJ6 628 aa26.42■■□□□ 1.82
ATP1A3-203ENST00000465007 ERCC6L2Q5T890 1561 aa26.39■■□□□ 1.82
ATP1A3-203ENST00000465007 NPM1P06748 294 aaKnown RBP eCLIP26.39■■□□□ 1.82
ATP1A3-203ENST00000465007 PRG4Q92954 1404 aaPredicted RBP26.39■■□□□ 1.81
ATP1A3-203ENST00000465007 SHROOM2Q13796 1616 aa26.31■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms