RNA–Protein interactions for RNA: ENST00000464903.1

TRAF3IP2-209, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 5

Gene TRAF3IP2, Length 297 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-209ENST00000464903 NISCHQ9Y2I1 1504 aa15.23■□□□□ 0.03
TRAF3IP2-209ENST00000464903 ABCC9O60706 1549 aa13.8□□□□□ -0.2
TRAF3IP2-209ENST00000464903 CCDC180Q9P1Z9 1646 aa13.65□□□□□ -0.22
TRAF3IP2-209ENST00000464903 DNAJC5BQ9UF47 199 aa13.11□□□□□ -0.31
TRAF3IP2-209ENST00000464903 RB1CC1Q8TDY2 1594 aa13.02□□□□□ -0.33
TRAF3IP2-209ENST00000464903 NACADO15069 1562 aa12.92□□□□□ -0.34
TRAF3IP2-209ENST00000464903 PABPN1Q86U42 306 aaKnown RBP eCLIP12.84□□□□□ -0.35
TRAF3IP2-209ENST00000464903 UNC13AQ9UPW8 1703 aa12.81□□□□□ -0.36
TRAF3IP2-209ENST00000464903 DCAF8L2P0C7V8 631 aa12.79□□□□□ -0.36
TRAF3IP2-209ENST00000464903 BICRAQ9NZM4 1560 aa12.78□□□□□ -0.36
TRAF3IP2-209ENST00000464903 MYO15BQ96JP2 1530 aa12.72□□□□□ -0.37
TRAF3IP2-209ENST00000464903 ZCCHC6Q5VYS8 1495 aaKnown RBP12.63□□□□□ -0.39
TRAF3IP2-209ENST00000464903 DCAF1Q9Y4B6 1507 aa12.54□□□□□ -0.4
TRAF3IP2-209ENST00000464903 SCRIBQ14160 1630 aa12.49□□□□□ -0.41
TRAF3IP2-209ENST00000464903 CC2D2AQ9P2K1 1620 aa12.45□□□□□ -0.42
TRAF3IP2-209ENST00000464903 SHROOM4Q9ULL8 1493 aa12.45□□□□□ -0.42
TRAF3IP2-209ENST00000464903 CECR2Q9BXF3 1484 aa12.41□□□□□ -0.42
TRAF3IP2-209ENST00000464903 EIF4G1Q04637 1599 aaKnown RBP12.41□□□□□ -0.42
TRAF3IP2-209ENST00000464903 DNAJC5Q9H3Z4 198 aa11.98□□□□□ -0.49
TRAF3IP2-209ENST00000464903 NCAPD3P42695 1498 aa11.97□□□□□ -0.49
TRAF3IP2-209ENST00000464903 ATAD2BQ9ULI0 1458 aa11.95□□□□□ -0.5
TRAF3IP2-209ENST00000464903 SMARCA4P51532 1647 aa11.9□□□□□ -0.5
TRAF3IP2-209ENST00000464903 NESP48681 1621 aa11.88□□□□□ -0.51
TRAF3IP2-209ENST00000464903 CUX2O14529 1486 aa11.87□□□□□ -0.51
TRAF3IP2-209ENST00000464903 HMGXB3Q12766 1538 aa11.86□□□□□ -0.51
TRAF3IP2-209ENST00000464903 SMARCA2P51531 1590 aa11.83□□□□□ -0.52
TRAF3IP2-209ENST00000464903 ERCC6Q03468 1493 aa11.83□□□□□ -0.52
TRAF3IP2-209ENST00000464903 PEG3Q9GZU2 1588 aa11.79□□□□□ -0.52
TRAF3IP2-209ENST00000464903 MROH2BQ7Z745 1585 aa11.78□□□□□ -0.52
TRAF3IP2-209ENST00000464903 BAZ1AQ9NRL2 1556 aaPredicted RBP11.78□□□□□ -0.52
TRAF3IP2-209ENST00000464903 BAZ1BQ9UIG0 1483 aaKnown RBP11.77□□□□□ -0.52
TRAF3IP2-209ENST00000464903 THOC2Q8NI27 1593 aaKnown RBP11.75□□□□□ -0.53
TRAF3IP2-209ENST00000464903 LAMC3Q9Y6N6 1575 aa11.67□□□□□ -0.54
TRAF3IP2-209ENST00000464903 KIF21AQ7Z4S6 1674 aa11.67□□□□□ -0.54
TRAF3IP2-209ENST00000464903 WIZO95785 1651 aa11.62□□□□□ -0.55
TRAF3IP2-209ENST00000464903 CADPSQ9ULU8 1353 aa11.58□□□□□ -0.56
TRAF3IP2-209ENST00000464903 PDS5BQ9NTI5 1447 aa11.58□□□□□ -0.56
TRAF3IP2-209ENST00000464903 WDR62O43379 1518 aa11.55□□□□□ -0.56
TRAF3IP2-209ENST00000464903 MRC2Q9UBG0 1479 aa11.54□□□□□ -0.56
TRAF3IP2-209ENST00000464903 RSF1Q96T23 1441 aaPredicted RBP11.48□□□□□ -0.57
TRAF3IP2-209ENST00000464903 CFTRP13569 1480 aa11.46□□□□□ -0.57
TRAF3IP2-209ENST00000464903 FANCD2Q9BXW9 1451 aa11.46□□□□□ -0.57
TRAF3IP2-209ENST00000464903 CEP164Q9UPV0 1460 aa11.45□□□□□ -0.58
TRAF3IP2-209ENST00000464903 TOP2AP11388 1531 aaKnown RBP11.43□□□□□ -0.58
TRAF3IP2-209ENST00000464903 URB2Q14146 1524 aaKnown RBP11.43□□□□□ -0.58
TRAF3IP2-209ENST00000464903 TRIM41Q8WV44 630 aa11.39□□□□□ -0.59
TRAF3IP2-209ENST00000464903 CCDC88BA6NC98 1476 aa11.32□□□□□ -0.6
TRAF3IP2-209ENST00000464903 ZNF608Q9ULD9 1512 aaPredicted RBP11.31□□□□□ -0.6
TRAF3IP2-209ENST00000464903 PRDM2Q13029 1718 aa11.27□□□□□ -0.61
TRAF3IP2-209ENST00000464903 OSCARQ8IYS5 282 aa11.26□□□□□ -0.61
TRAF3IP2-209ENST00000464903 TOPBP1Q92547 1522 aa11.25□□□□□ -0.61
TRAF3IP2-209ENST00000464903 IFT140Q96RY7 1462 aa11.23□□□□□ -0.61
TRAF3IP2-209ENST00000464903 RIMBP3CA6NJZ7 1639 aa11.22□□□□□ -0.61
TRAF3IP2-209ENST00000464903 RIMBP3BA6NNM3 1639 aa11.22□□□□□ -0.61
TRAF3IP2-209ENST00000464903 RIMBP3Q9UFD9 1639 aa11.22□□□□□ -0.61
TRAF3IP2-209ENST00000464903 EIF4G3O43432 1585 aaKnown RBP11.2□□□□□ -0.62
TRAF3IP2-209ENST00000464903 TARBP1Q13395 1621 aaKnown RBP11.18□□□□□ -0.62
TRAF3IP2-209ENST00000464903 DNMBPQ6XZF7 1577 aa11.18□□□□□ -0.62
TRAF3IP2-209ENST00000464903 ARHGEF11O15085 1522 aa11.18□□□□□ -0.62
TRAF3IP2-209ENST00000464903 AQRO60306 1485 aaKnown RBP eCLIP11.17□□□□□ -0.62
TRAF3IP2-209ENST00000464903 POLA1P09884 1462 aaPredicted RBP11.14□□□□□ -0.63
TRAF3IP2-209ENST00000464903 AEBP2Q6ZN18 517 aaPredicted RBP11.14□□□□□ -0.63
TRAF3IP2-209ENST00000464903 RAD54L2Q9Y4B4 1467 aa11.12□□□□□ -0.63
TRAF3IP2-209ENST00000464903 CHD1O14646 1710 aa11.12□□□□□ -0.63
TRAF3IP2-209ENST00000464903 ABCC8Q09428 1581 aa11.11□□□□□ -0.63
TRAF3IP2-209ENST00000464903 ARAP1Q96P48 1450 aa11.1□□□□□ -0.63
TRAF3IP2-209ENST00000464903 TDRD9Q8NDG6 1382 aaKnown RBP11.07□□□□□ -0.64
TRAF3IP2-209ENST00000464903 CUX1P39880 1505 aa11.06□□□□□ -0.64
TRAF3IP2-209ENST00000464903 FGD5Q6ZNL6 1462 aa11.06□□□□□ -0.64
TRAF3IP2-209ENST00000464903 CYB5RLQ6IPT4 315 aa11.05□□□□□ -0.64
TRAF3IP2-209ENST00000464903 SOGA1O94964 1423 aa11.04□□□□□ -0.64
TRAF3IP2-209ENST00000464903 SNAPC4Q5SXM2 1469 aa11.04□□□□□ -0.64
TRAF3IP2-209ENST00000464903 CLASP1Q7Z460 1538 aa11.03□□□□□ -0.64
TRAF3IP2-209ENST00000464903 FBLN2P98095 1184 aa11.01□□□□□ -0.65
TRAF3IP2-209ENST00000464903 WDR97A6NE52 1622 aa11□□□□□ -0.65
TRAF3IP2-209ENST00000464903 GRIN2BQ13224 1484 aa10.95□□□□□ -0.66
TRAF3IP2-209ENST00000464903 MAGI1Q96QZ7 1491 aaPredicted RBP10.95□□□□□ -0.66
TRAF3IP2-209ENST00000464903 SYNJ2O15056 1496 aa10.93□□□□□ -0.66
TRAF3IP2-209ENST00000464903 ABCA5Q8WWZ7 1642 aa10.93□□□□□ -0.66
TRAF3IP2-209ENST00000464903 PBRM1Q86U86 1689 aa10.92□□□□□ -0.66
TRAF3IP2-209ENST00000464903 SYNJ1O43426 1573 aa10.91□□□□□ -0.66
TRAF3IP2-209ENST00000464903 ERCC6L2Q5T890 1561 aa10.91□□□□□ -0.66
TRAF3IP2-209ENST00000464903 ABCA10Q8WWZ4 1543 aa10.91□□□□□ -0.66
TRAF3IP2-209ENST00000464903 GAPVD1Q14C86 1478 aa10.91□□□□□ -0.66
TRAF3IP2-209ENST00000464903 CHMP7Q8WUX9 453 aaPredicted RBP10.9□□□□□ -0.66
TRAF3IP2-209ENST00000464903 TRHP20396 242 aaPredicted RBP10.89□□□□□ -0.67
TRAF3IP2-209ENST00000464903 CEP170Q5SW79 1584 aa10.86□□□□□ -0.67
TRAF3IP2-209ENST00000464903 ADAMTS12P58397 1594 aa10.85□□□□□ -0.67
TRAF3IP2-209ENST00000464903 SUPT5HO00267 1087 aaKnown RBP10.84□□□□□ -0.67
TRAF3IP2-209ENST00000464903 GRIN2AQ12879 1464 aa10.84□□□□□ -0.67
TRAF3IP2-209ENST00000464903 NUP160Q12769 1436 aa10.83□□□□□ -0.68
TRAF3IP2-209ENST00000464903 BIVM-ERCC5R4GMW8 1640 aa10.82□□□□□ -0.68
TRAF3IP2-209ENST00000464903 TOP2BQ02880 1626 aa10.81□□□□□ -0.68
TRAF3IP2-209ENST00000464903 WRNQ14191 1432 aaPredicted RBP eCLIP10.79□□□□□ -0.68
TRAF3IP2-209ENST00000464903 SHROOM2Q13796 1616 aa10.79□□□□□ -0.68
TRAF3IP2-209ENST00000464903 FHAD1B1AJZ9 1412 aa10.75□□□□□ -0.69
TRAF3IP2-209ENST00000464903 ERICH3Q5RHP9 1530 aa10.74□□□□□ -0.69
TRAF3IP2-209ENST00000464903 CHIC1Q5VXU3 224 aa10.71□□□□□ -0.69
TRAF3IP2-209ENST00000464903 RUSC2Q8N2Y8 1516 aa10.7□□□□□ -0.7
TRAF3IP2-209ENST00000464903 PRG4Q92954 1404 aaPredicted RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms