RNA–Protein interactions for RNA: ENST00000464852.1

TNRC18-209, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 3

Gene TNRC18, Length 418 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-209ENST00000464852 NISCHQ9Y2I1 1504 aa25.02■■□□□ 1.6
TNRC18-209ENST00000464852 ABCC9O60706 1549 aa23.38■■□□□ 1.33
TNRC18-209ENST00000464852 DNAJC5BQ9UF47 199 aa23.02■■□□□ 1.28
TNRC18-209ENST00000464852 CCDC180Q9P1Z9 1646 aa22.29■■□□□ 1.16
TNRC18-209ENST00000464852 DNAJC5Q9H3Z4 198 aa21.82■■□□□ 1.08
TNRC18-209ENST00000464852 RB1CC1Q8TDY2 1594 aa21.72■■□□□ 1.07
TNRC18-209ENST00000464852 PABPN1Q86U42 306 aaKnown RBP eCLIP21.64■■□□□ 1.05
TNRC18-209ENST00000464852 UNC13AQ9UPW8 1703 aa21.41■■□□□ 1.02
TNRC18-209ENST00000464852 NACADO15069 1562 aa21.31■■□□□ 1
TNRC18-209ENST00000464852 AEBP2Q6ZN18 517 aaPredicted RBP21.27■■□□□ 1
TNRC18-209ENST00000464852 BICRAQ9NZM4 1560 aa21.24■□□□□ 0.99
TNRC18-209ENST00000464852 CECR2Q9BXF3 1484 aa21.14■□□□□ 0.98
TNRC18-209ENST00000464852 CC2D2AQ9P2K1 1620 aa21.07■□□□□ 0.96
TNRC18-209ENST00000464852 DCAF8L2P0C7V8 631 aa21.06■□□□□ 0.96
TNRC18-209ENST00000464852 ZCCHC6Q5VYS8 1495 aaKnown RBP20.92■□□□□ 0.94
TNRC18-209ENST00000464852 CHIC1Q5VXU3 224 aa20.74■□□□□ 0.91
TNRC18-209ENST00000464852 DCAF1Q9Y4B6 1507 aa20.73■□□□□ 0.91
TNRC18-209ENST00000464852 EIF4G1Q04637 1599 aaKnown RBP20.73■□□□□ 0.91
TNRC18-209ENST00000464852 SHROOM4Q9ULL8 1493 aa20.64■□□□□ 0.89
TNRC18-209ENST00000464852 MYO15BQ96JP2 1530 aa20.63■□□□□ 0.89
TNRC18-209ENST00000464852 CUX2O14529 1486 aa20.5■□□□□ 0.87
TNRC18-209ENST00000464852 TRIM41Q8WV44 630 aa20.4■□□□□ 0.86
TNRC18-209ENST00000464852 SCRIBQ14160 1630 aa20.27■□□□□ 0.84
TNRC18-209ENST00000464852 ERCC6Q03468 1493 aa20.18■□□□□ 0.82
TNRC18-209ENST00000464852 NESP48681 1621 aa19.83■□□□□ 0.76
TNRC18-209ENST00000464852 THOC2Q8NI27 1593 aaKnown RBP19.78■□□□□ 0.76
TNRC18-209ENST00000464852 NCAPD3P42695 1498 aa19.72■□□□□ 0.75
TNRC18-209ENST00000464852 SMARCA2P51531 1590 aa19.55■□□□□ 0.72
TNRC18-209ENST00000464852 KIF21AQ7Z4S6 1674 aa19.54■□□□□ 0.72
TNRC18-209ENST00000464852 ATAD2BQ9ULI0 1458 aa19.52■□□□□ 0.72
TNRC18-209ENST00000464852 BAZ1AQ9NRL2 1556 aaPredicted RBP19.46■□□□□ 0.71
TNRC18-209ENST00000464852 OSCARQ8IYS5 282 aa19.45■□□□□ 0.7
TNRC18-209ENST00000464852 HMGXB3Q12766 1538 aa19.43■□□□□ 0.7
TNRC18-209ENST00000464852 LAMC3Q9Y6N6 1575 aa19.42■□□□□ 0.7
TNRC18-209ENST00000464852 RIMBP3CA6NJZ7 1639 aa19.36■□□□□ 0.69
TNRC18-209ENST00000464852 RIMBP3BA6NNM3 1639 aa19.36■□□□□ 0.69
TNRC18-209ENST00000464852 RIMBP3Q9UFD9 1639 aa19.36■□□□□ 0.69
TNRC18-209ENST00000464852 PDS5BQ9NTI5 1447 aa19.32■□□□□ 0.68
TNRC18-209ENST00000464852 RSF1Q96T23 1441 aaPredicted RBP19.28■□□□□ 0.68
TNRC18-209ENST00000464852 MROH2BQ7Z745 1585 aa19.27■□□□□ 0.68
TNRC18-209ENST00000464852 SMARCA4P51532 1647 aa19.27■□□□□ 0.68
TNRC18-209ENST00000464852 SUPT5HO00267 1087 aaKnown RBP19.27■□□□□ 0.68
TNRC18-209ENST00000464852 WDR62O43379 1518 aa19.24■□□□□ 0.67
TNRC18-209ENST00000464852 MRC2Q9UBG0 1479 aa19.23■□□□□ 0.67
TNRC18-209ENST00000464852 BAZ1BQ9UIG0 1483 aaKnown RBP19.22■□□□□ 0.67
TNRC18-209ENST00000464852 TRHP20396 242 aaPredicted RBP19.2■□□□□ 0.66
TNRC18-209ENST00000464852 ARHGEF11O15085 1522 aa19.14■□□□□ 0.65
TNRC18-209ENST00000464852 CYB5RLQ6IPT4 315 aa19.11■□□□□ 0.65
TNRC18-209ENST00000464852 WIZO95785 1651 aa19.08■□□□□ 0.65
TNRC18-209ENST00000464852 PEG3Q9GZU2 1588 aa19.08■□□□□ 0.65
TNRC18-209ENST00000464852 CADPSQ9ULU8 1353 aa19.06■□□□□ 0.64
TNRC18-209ENST00000464852 CEP164Q9UPV0 1460 aa18.93■□□□□ 0.62
TNRC18-209ENST00000464852 TOP2AP11388 1531 aaKnown RBP18.91■□□□□ 0.62
TNRC18-209ENST00000464852 ARAP1Q96P48 1450 aa18.9■□□□□ 0.62
TNRC18-209ENST00000464852 ILDR1Q86SU0 546 aaPredicted RBP18.85■□□□□ 0.61
TNRC18-209ENST00000464852 FANCD2Q9BXW9 1451 aa18.84■□□□□ 0.61
TNRC18-209ENST00000464852 URB2Q14146 1524 aaKnown RBP18.8■□□□□ 0.6
TNRC18-209ENST00000464852 ZNF608Q9ULD9 1512 aaPredicted RBP18.76■□□□□ 0.59
TNRC18-209ENST00000464852 CCDC88BA6NC98 1476 aa18.74■□□□□ 0.59
TNRC18-209ENST00000464852 CHD1O14646 1710 aa18.69■□□□□ 0.58
TNRC18-209ENST00000464852 CFTRP13569 1480 aa18.62■□□□□ 0.57
TNRC18-209ENST00000464852 IFT140Q96RY7 1462 aa18.59■□□□□ 0.57
TNRC18-209ENST00000464852 EIF4G3O43432 1585 aaKnown RBP18.55■□□□□ 0.56
TNRC18-209ENST00000464852 FBLN2P98095 1184 aa18.51■□□□□ 0.55
TNRC18-209ENST00000464852 AQRO60306 1485 aaKnown RBP eCLIP18.46■□□□□ 0.54
TNRC18-209ENST00000464852 PRDM2Q13029 1718 aa18.4■□□□□ 0.54
TNRC18-209ENST00000464852 CLASP1Q7Z460 1538 aa18.39■□□□□ 0.53
TNRC18-209ENST00000464852 TOPBP1Q92547 1522 aa18.39■□□□□ 0.53
TNRC18-209ENST00000464852 PHF23Q9BUL5 403 aaPredicted RBP18.38■□□□□ 0.53
TNRC18-209ENST00000464852 TARBP1Q13395 1621 aaKnown RBP18.34■□□□□ 0.53
TNRC18-209ENST00000464852 KDM4FA0A1W2PPD8 638 aa18.33■□□□□ 0.52
TNRC18-209ENST00000464852 GAPVD1Q14C86 1478 aa18.26■□□□□ 0.51
TNRC18-209ENST00000464852 KIF13AQ9H1H9 1805 aa18.26■□□□□ 0.51
TNRC18-209ENST00000464852 SYNJ1O43426 1573 aa18.23■□□□□ 0.51
TNRC18-209ENST00000464852 ABCC8Q09428 1581 aa18.21■□□□□ 0.51
TNRC18-209ENST00000464852 DNMBPQ6XZF7 1577 aa18.19■□□□□ 0.5
TNRC18-209ENST00000464852 CHMP7Q8WUX9 453 aaPredicted RBP18.18■□□□□ 0.5
TNRC18-209ENST00000464852 SNAPC4Q5SXM2 1469 aa18.18■□□□□ 0.5
TNRC18-209ENST00000464852 TDRD9Q8NDG6 1382 aaKnown RBP18.17■□□□□ 0.5
TNRC18-209ENST00000464852 WRNQ14191 1432 aaPredicted RBP eCLIP18.16■□□□□ 0.5
TNRC18-209ENST00000464852 POLA1P09884 1462 aaPredicted RBP18.13■□□□□ 0.49
TNRC18-209ENST00000464852 RAD54L2Q9Y4B4 1467 aa18.13■□□□□ 0.49
TNRC18-209ENST00000464852 ERCC6L2Q5T890 1561 aa18.1■□□□□ 0.49
TNRC18-209ENST00000464852 TOP2BQ02880 1626 aa18.05■□□□□ 0.48
TNRC18-209ENST00000464852 CUX1P39880 1505 aa18.04■□□□□ 0.48
TNRC18-209ENST00000464852 MAGI1Q96QZ7 1491 aaPredicted RBP18.04■□□□□ 0.48
TNRC18-209ENST00000464852 SOGA1O94964 1423 aa18.03■□□□□ 0.48
TNRC18-209ENST00000464852 SYNJ2O15056 1496 aa18.02■□□□□ 0.48
TNRC18-209ENST00000464852 BIVM-ERCC5R4GMW8 1640 aa18.01■□□□□ 0.47
TNRC18-209ENST00000464852 WDR97A6NE52 1622 aa17.96■□□□□ 0.47
TNRC18-209ENST00000464852 HECW2Q9P2P5 1572 aa17.96■□□□□ 0.46
TNRC18-209ENST00000464852 GRIN2BQ13224 1484 aa17.95■□□□□ 0.46
TNRC18-209ENST00000464852 FAM69CQ0P6D2 419 aa17.95■□□□□ 0.46
TNRC18-209ENST00000464852 FBXO41Q8TF61 875 aa17.94■□□□□ 0.46
TNRC18-209ENST00000464852 KDM6BO15054 1643 aa17.94■□□□□ 0.46
TNRC18-209ENST00000464852 FGD5Q6ZNL6 1462 aa17.9■□□□□ 0.46
TNRC18-209ENST00000464852 ABCC10Q5T3U5 1492 aa17.89■□□□□ 0.45
TNRC18-209ENST00000464852 CEP170Q5SW79 1584 aa17.89■□□□□ 0.45
TNRC18-209ENST00000464852 TSPOAP1O95153 1857 aa17.88■□□□□ 0.45
TNRC18-209ENST00000464852 PBRM1Q86U86 1689 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 139.4 ms