RNA–Protein interactions for RNA: ENST00000464508.1

HM13-208, Transcript of histocompatibility minor 13, humanhuman

TSL 2

Gene HM13, Length 855 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HM13-208ENST00000464508 NISCHQ9Y2I1 1504 aa37.26■■■■□ 3.56
HM13-208ENST00000464508 ABCC9O60706 1549 aa34.3■■■■□ 3.08
HM13-208ENST00000464508 CCDC180Q9P1Z9 1646 aa33.75■■■□□ 2.99
HM13-208ENST00000464508 DNAJC5BQ9UF47 199 aa32.63■■■□□ 2.81
HM13-208ENST00000464508 RB1CC1Q8TDY2 1594 aa32.43■■■□□ 2.78
HM13-208ENST00000464508 NACADO15069 1562 aa32.05■■■□□ 2.72
HM13-208ENST00000464508 PABPN1Q86U42 306 aaKnown RBP eCLIP31.8■■■□□ 2.68
HM13-208ENST00000464508 DCAF8L2P0C7V8 631 aa31.72■■■□□ 2.67
HM13-208ENST00000464508 UNC13AQ9UPW8 1703 aa31.61■■■□□ 2.65
HM13-208ENST00000464508 BICRAQ9NZM4 1560 aa31.42■■■□□ 2.62
HM13-208ENST00000464508 MYO15BQ96JP2 1530 aa31.41■■■□□ 2.62
HM13-208ENST00000464508 SHROOM4Q9ULL8 1493 aa31.07■■■□□ 2.56
HM13-208ENST00000464508 CECR2Q9BXF3 1484 aa30.99■■■□□ 2.55
HM13-208ENST00000464508 CC2D2AQ9P2K1 1620 aa30.95■■■□□ 2.55
HM13-208ENST00000464508 DCAF1Q9Y4B6 1507 aa30.78■■■□□ 2.52
HM13-208ENST00000464508 EIF4G1Q04637 1599 aaKnown RBP30.75■■■□□ 2.51
HM13-208ENST00000464508 ZCCHC6Q5VYS8 1495 aaKnown RBP30.75■■■□□ 2.51
HM13-208ENST00000464508 SCRIBQ14160 1630 aa30.67■■■□□ 2.5
HM13-208ENST00000464508 DNAJC5Q9H3Z4 198 aa30.51■■■□□ 2.47
HM13-208ENST00000464508 CUX2O14529 1486 aa29.87■■■□□ 2.37
HM13-208ENST00000464508 ERCC6Q03468 1493 aa29.73■■■□□ 2.35
HM13-208ENST00000464508 NCAPD3P42695 1498 aa29.57■■■□□ 2.32
HM13-208ENST00000464508 ATAD2BQ9ULI0 1458 aa29.38■■■□□ 2.29
HM13-208ENST00000464508 SMARCA2P51531 1590 aa29.32■■■□□ 2.28
HM13-208ENST00000464508 HMGXB3Q12766 1538 aa29.32■■■□□ 2.28
HM13-208ENST00000464508 NESP48681 1621 aa29.25■■■□□ 2.27
HM13-208ENST00000464508 SMARCA4P51532 1647 aa29.2■■■□□ 2.26
HM13-208ENST00000464508 THOC2Q8NI27 1593 aaKnown RBP29.12■■■□□ 2.25
HM13-208ENST00000464508 BAZ1BQ9UIG0 1483 aaKnown RBP29.1■■■□□ 2.25
HM13-208ENST00000464508 LAMC3Q9Y6N6 1575 aa29.03■■■□□ 2.24
HM13-208ENST00000464508 BAZ1AQ9NRL2 1556 aaPredicted RBP29.01■■■□□ 2.23
HM13-208ENST00000464508 PEG3Q9GZU2 1588 aa28.93■■■□□ 2.22
HM13-208ENST00000464508 TRIM41Q8WV44 630 aa28.92■■■□□ 2.22
HM13-208ENST00000464508 PDS5BQ9NTI5 1447 aa28.91■■■□□ 2.22
HM13-208ENST00000464508 KIF21AQ7Z4S6 1674 aa28.88■■■□□ 2.21
HM13-208ENST00000464508 MROH2BQ7Z745 1585 aa28.67■■■□□ 2.18
HM13-208ENST00000464508 MRC2Q9UBG0 1479 aa28.66■■■□□ 2.18
HM13-208ENST00000464508 CADPSQ9ULU8 1353 aa28.64■■■□□ 2.18
HM13-208ENST00000464508 WDR62O43379 1518 aa28.6■■■□□ 2.17
HM13-208ENST00000464508 CEP164Q9UPV0 1460 aa28.44■■■□□ 2.14
HM13-208ENST00000464508 OSCARQ8IYS5 282 aa28.39■■■□□ 2.14
HM13-208ENST00000464508 FANCD2Q9BXW9 1451 aa28.33■■■□□ 2.13
HM13-208ENST00000464508 WIZO95785 1651 aa28.29■■■□□ 2.12
HM13-208ENST00000464508 CFTRP13569 1480 aa28.19■■■□□ 2.1
HM13-208ENST00000464508 URB2Q14146 1524 aaKnown RBP28.1■■■□□ 2.09
HM13-208ENST00000464508 RIMBP3CA6NJZ7 1639 aa28.06■■■□□ 2.08
HM13-208ENST00000464508 RIMBP3BA6NNM3 1639 aa28.06■■■□□ 2.08
HM13-208ENST00000464508 RIMBP3Q9UFD9 1639 aa28.06■■■□□ 2.08
HM13-208ENST00000464508 TOP2AP11388 1531 aaKnown RBP27.95■■■□□ 2.06
HM13-208ENST00000464508 ARHGEF11O15085 1522 aa27.92■■■□□ 2.06
HM13-208ENST00000464508 IFT140Q96RY7 1462 aa27.89■■■□□ 2.06
HM13-208ENST00000464508 PRDM2Q13029 1718 aa27.87■■■□□ 2.05
HM13-208ENST00000464508 RSF1Q96T23 1441 aaPredicted RBP27.86■■■□□ 2.05
HM13-208ENST00000464508 ZNF608Q9ULD9 1512 aaPredicted RBP27.84■■■□□ 2.05
HM13-208ENST00000464508 CYB5RLQ6IPT4 315 aa27.74■■■□□ 2.03
HM13-208ENST00000464508 TOPBP1Q92547 1522 aa27.71■■■□□ 2.03
HM13-208ENST00000464508 EIF4G3O43432 1585 aaKnown RBP27.7■■■□□ 2.03
HM13-208ENST00000464508 TRHP20396 242 aaPredicted RBP27.68■■■□□ 2.02
HM13-208ENST00000464508 ABCC8Q09428 1581 aa27.68■■■□□ 2.02
HM13-208ENST00000464508 CCDC88BA6NC98 1476 aa27.6■■■□□ 2.01
HM13-208ENST00000464508 CHD1O14646 1710 aa27.6■■■□□ 2.01
HM13-208ENST00000464508 ARAP1Q96P48 1450 aa27.58■■■□□ 2.01
HM13-208ENST00000464508 DNMBPQ6XZF7 1577 aa27.57■■■□□ 2
HM13-208ENST00000464508 AQRO60306 1485 aaKnown RBP eCLIP27.52■■■□□ 2
HM13-208ENST00000464508 FBLN2P98095 1184 aa27.52■■■□□ 2
HM13-208ENST00000464508 TARBP1Q13395 1621 aaKnown RBP27.49■■□□□ 1.99
HM13-208ENST00000464508 POLA1P09884 1462 aaPredicted RBP27.38■■□□□ 1.97
HM13-208ENST00000464508 AEBP2Q6ZN18 517 aaPredicted RBP27.36■■□□□ 1.97
HM13-208ENST00000464508 CLASP1Q7Z460 1538 aa27.26■■□□□ 1.96
HM13-208ENST00000464508 RAD54L2Q9Y4B4 1467 aa27.26■■□□□ 1.95
HM13-208ENST00000464508 SOGA1O94964 1423 aa27.26■■□□□ 1.95
HM13-208ENST00000464508 TDRD9Q8NDG6 1382 aaKnown RBP27.26■■□□□ 1.95
HM13-208ENST00000464508 WDR97A6NE52 1622 aa27.26■■□□□ 1.95
HM13-208ENST00000464508 SYNJ1O43426 1573 aa27.26■■□□□ 1.95
HM13-208ENST00000464508 SNAPC4Q5SXM2 1469 aa27.25■■□□□ 1.95
HM13-208ENST00000464508 CHMP7Q8WUX9 453 aaPredicted RBP27.23■■□□□ 1.95
HM13-208ENST00000464508 MAGI1Q96QZ7 1491 aaPredicted RBP27.19■■□□□ 1.94
HM13-208ENST00000464508 FGD5Q6ZNL6 1462 aa27.13■■□□□ 1.93
HM13-208ENST00000464508 GRIN2BQ13224 1484 aa27.12■■□□□ 1.93
HM13-208ENST00000464508 SYNJ2O15056 1496 aa27.1■■□□□ 1.93
HM13-208ENST00000464508 GAPVD1Q14C86 1478 aa27.05■■□□□ 1.92
HM13-208ENST00000464508 CUX1P39880 1505 aa26.98■■□□□ 1.91
HM13-208ENST00000464508 PBRM1Q86U86 1689 aa26.95■■□□□ 1.9
HM13-208ENST00000464508 ABCA5Q8WWZ7 1642 aa26.8■■□□□ 1.88
HM13-208ENST00000464508 ABCA10Q8WWZ4 1543 aa26.8■■□□□ 1.88
HM13-208ENST00000464508 GRIN2AQ12879 1464 aa26.75■■□□□ 1.87
HM13-208ENST00000464508 ERCC6L2Q5T890 1561 aa26.75■■□□□ 1.87
HM13-208ENST00000464508 CEP170Q5SW79 1584 aa26.71■■□□□ 1.87
HM13-208ENST00000464508 NUP160Q12769 1436 aa26.67■■□□□ 1.86
HM13-208ENST00000464508 ADAMTS12P58397 1594 aa26.66■■□□□ 1.86
HM13-208ENST00000464508 SHROOM2Q13796 1616 aa26.62■■□□□ 1.85
HM13-208ENST00000464508 KIF13AQ9H1H9 1805 aa26.6■■□□□ 1.85
HM13-208ENST00000464508 WRNQ14191 1432 aaPredicted RBP eCLIP26.59■■□□□ 1.85
HM13-208ENST00000464508 FHAD1B1AJZ9 1412 aa26.57■■□□□ 1.84
HM13-208ENST00000464508 PRG4Q92954 1404 aaPredicted RBP26.48■■□□□ 1.83
HM13-208ENST00000464508 ERICH3Q5RHP9 1530 aa26.47■■□□□ 1.83
HM13-208ENST00000464508 NPM1P06748 294 aaKnown RBP eCLIP26.43■■□□□ 1.82
HM13-208ENST00000464508 FAM69CQ0P6D2 419 aa26.43■■□□□ 1.82
HM13-208ENST00000464508 TOP2BQ02880 1626 aa26.42■■□□□ 1.82
HM13-208ENST00000464508 BIVM-ERCC5R4GMW8 1640 aa26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms