RNA–Protein interactions for RNA: ENST00000464320.5

PLS1-205, Transcript of plastin 1, humanhuman

TSL 5

Gene PLS1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLS1-205ENST00000464320 NISCHQ9Y2I1 1504 aa31.39■■■□□ 2.61
PLS1-205ENST00000464320 CCDC180Q9P1Z9 1646 aa28.1■■■□□ 2.09
PLS1-205ENST00000464320 ABCC9O60706 1549 aa27.56■■■□□ 2
PLS1-205ENST00000464320 RB1CC1Q8TDY2 1594 aa26.56■■□□□ 1.84
PLS1-205ENST00000464320 NACADO15069 1562 aa26.5■■□□□ 1.83
PLS1-205ENST00000464320 MYO15BQ96JP2 1530 aa26.34■■□□□ 1.81
PLS1-205ENST00000464320 DCAF8L2P0C7V8 631 aa26.2■■□□□ 1.78
PLS1-205ENST00000464320 ZCCHC6Q5VYS8 1495 aaKnown RBP26.09■■□□□ 1.77
PLS1-205ENST00000464320 DCAF1Q9Y4B6 1507 aa26.09■■□□□ 1.77
PLS1-205ENST00000464320 UNC13AQ9UPW8 1703 aa25.83■■□□□ 1.72
PLS1-205ENST00000464320 PABPN1Q86U42 306 aaKnown RBP eCLIP25.66■■□□□ 1.7
PLS1-205ENST00000464320 BICRAQ9NZM4 1560 aa25.65■■□□□ 1.7
PLS1-205ENST00000464320 SHROOM4Q9ULL8 1493 aa25.61■■□□□ 1.69
PLS1-205ENST00000464320 DNAJC5BQ9UF47 199 aa25.46■■□□□ 1.67
PLS1-205ENST00000464320 SCRIBQ14160 1630 aa25.44■■□□□ 1.66
PLS1-205ENST00000464320 EIF4G1Q04637 1599 aaKnown RBP25.04■■□□□ 1.6
PLS1-205ENST00000464320 CC2D2AQ9P2K1 1620 aa24.97■■□□□ 1.59
PLS1-205ENST00000464320 CECR2Q9BXF3 1484 aa24.87■■□□□ 1.57
PLS1-205ENST00000464320 NCAPD3P42695 1498 aa24.43■■□□□ 1.5
PLS1-205ENST00000464320 SMARCA4P51532 1647 aa24.39■■□□□ 1.5
PLS1-205ENST00000464320 BAZ1AQ9NRL2 1556 aaPredicted RBP24.39■■□□□ 1.5
PLS1-205ENST00000464320 SMARCA2P51531 1590 aa24.37■■□□□ 1.49
PLS1-205ENST00000464320 ATAD2BQ9ULI0 1458 aa24.33■■□□□ 1.49
PLS1-205ENST00000464320 HMGXB3Q12766 1538 aa24.29■■□□□ 1.48
PLS1-205ENST00000464320 PEG3Q9GZU2 1588 aa24.25■■□□□ 1.47
PLS1-205ENST00000464320 BAZ1BQ9UIG0 1483 aaKnown RBP24.13■■□□□ 1.45
PLS1-205ENST00000464320 MROH2BQ7Z745 1585 aa24.1■■□□□ 1.45
PLS1-205ENST00000464320 ERCC6Q03468 1493 aa23.86■■□□□ 1.41
PLS1-205ENST00000464320 LAMC3Q9Y6N6 1575 aa23.83■■□□□ 1.41
PLS1-205ENST00000464320 WIZO95785 1651 aa23.8■■□□□ 1.4
PLS1-205ENST00000464320 CUX2O14529 1486 aa23.8■■□□□ 1.4
PLS1-205ENST00000464320 RSF1Q96T23 1441 aaPredicted RBP23.77■■□□□ 1.4
PLS1-205ENST00000464320 NESP48681 1621 aa23.73■■□□□ 1.39
PLS1-205ENST00000464320 PDS5BQ9NTI5 1447 aa23.69■■□□□ 1.38
PLS1-205ENST00000464320 CADPSQ9ULU8 1353 aa23.67■■□□□ 1.38
PLS1-205ENST00000464320 TOP2AP11388 1531 aaKnown RBP23.64■■□□□ 1.38
PLS1-205ENST00000464320 AEBP2Q6ZN18 517 aaPredicted RBP23.54■■□□□ 1.36
PLS1-205ENST00000464320 THOC2Q8NI27 1593 aaKnown RBP23.52■■□□□ 1.36
PLS1-205ENST00000464320 KIF21AQ7Z4S6 1674 aa23.5■■□□□ 1.35
PLS1-205ENST00000464320 CFTRP13569 1480 aa23.48■■□□□ 1.35
PLS1-205ENST00000464320 CHIC1Q5VXU3 224 aa23.4■■□□□ 1.34
PLS1-205ENST00000464320 MRC2Q9UBG0 1479 aa23.4■■□□□ 1.34
PLS1-205ENST00000464320 CEP164Q9UPV0 1460 aa23.38■■□□□ 1.33
PLS1-205ENST00000464320 FANCD2Q9BXW9 1451 aa23.36■■□□□ 1.33
PLS1-205ENST00000464320 WDR62O43379 1518 aa23.34■■□□□ 1.33
PLS1-205ENST00000464320 CCDC88BA6NC98 1476 aa23.31■■□□□ 1.32
PLS1-205ENST00000464320 DNAJC5Q9H3Z4 198 aa23.3■■□□□ 1.32
PLS1-205ENST00000464320 PRDM2Q13029 1718 aa23.3■■□□□ 1.32
PLS1-205ENST00000464320 ABCC8Q09428 1581 aa23.1■■□□□ 1.29
PLS1-205ENST00000464320 URB2Q14146 1524 aaKnown RBP23.09■■□□□ 1.29
PLS1-205ENST00000464320 TOPBP1Q92547 1522 aa22.95■■□□□ 1.26
PLS1-205ENST00000464320 DNMBPQ6XZF7 1577 aa22.94■■□□□ 1.26
PLS1-205ENST00000464320 IFT140Q96RY7 1462 aa22.94■■□□□ 1.26
PLS1-205ENST00000464320 SUPT5HO00267 1087 aaKnown RBP22.87■■□□□ 1.25
PLS1-205ENST00000464320 POLA1P09884 1462 aaPredicted RBP22.73■■□□□ 1.23
PLS1-205ENST00000464320 TARBP1Q13395 1621 aaKnown RBP22.72■■□□□ 1.23
PLS1-205ENST00000464320 OSCARQ8IYS5 282 aa22.72■■□□□ 1.23
PLS1-205ENST00000464320 ZNF608Q9ULD9 1512 aaPredicted RBP22.71■■□□□ 1.23
PLS1-205ENST00000464320 WDR97A6NE52 1622 aa22.7■■□□□ 1.22
PLS1-205ENST00000464320 EIF4G3O43432 1585 aaKnown RBP22.67■■□□□ 1.22
PLS1-205ENST00000464320 SOGA1O94964 1423 aa22.65■■□□□ 1.22
PLS1-205ENST00000464320 CUX1P39880 1505 aa22.63■■□□□ 1.21
PLS1-205ENST00000464320 FGD5Q6ZNL6 1462 aa22.62■■□□□ 1.21
PLS1-205ENST00000464320 AQRO60306 1485 aaKnown RBP eCLIP22.57■■□□□ 1.2
PLS1-205ENST00000464320 RAD54L2Q9Y4B4 1467 aa22.56■■□□□ 1.2
PLS1-205ENST00000464320 TDRD9Q8NDG6 1382 aaKnown RBP22.49■■□□□ 1.19
PLS1-205ENST00000464320 ABCA10Q8WWZ4 1543 aa22.47■■□□□ 1.19
PLS1-205ENST00000464320 WRNQ14191 1432 aaPredicted RBP eCLIP22.46■■□□□ 1.19
PLS1-205ENST00000464320 GRIN2BQ13224 1484 aa22.46■■□□□ 1.19
PLS1-205ENST00000464320 MAGI1Q96QZ7 1491 aaPredicted RBP22.46■■□□□ 1.19
PLS1-205ENST00000464320 TOP2BQ02880 1626 aa22.45■■□□□ 1.18
PLS1-205ENST00000464320 BIVM-ERCC5R4GMW8 1640 aa22.45■■□□□ 1.18
PLS1-205ENST00000464320 CHD1O14646 1710 aa22.41■■□□□ 1.18
PLS1-205ENST00000464320 GAPVD1Q14C86 1478 aa22.4■■□□□ 1.18
PLS1-205ENST00000464320 SNAPC4Q5SXM2 1469 aa22.38■■□□□ 1.17
PLS1-205ENST00000464320 ABCA5Q8WWZ7 1642 aa22.35■■□□□ 1.17
PLS1-205ENST00000464320 FBLN2P98095 1184 aa22.35■■□□□ 1.17
PLS1-205ENST00000464320 SYNJ2O15056 1496 aa22.34■■□□□ 1.17
PLS1-205ENST00000464320 CHMP7Q8WUX9 453 aaPredicted RBP22.34■■□□□ 1.17
PLS1-205ENST00000464320 PBRM1Q86U86 1689 aa22.33■■□□□ 1.17
PLS1-205ENST00000464320 SYNJ1O43426 1573 aa22.33■■□□□ 1.16
PLS1-205ENST00000464320 RIMBP3CA6NJZ7 1639 aa22.29■■□□□ 1.16
PLS1-205ENST00000464320 RIMBP3BA6NNM3 1639 aa22.29■■□□□ 1.16
PLS1-205ENST00000464320 RIMBP3Q9UFD9 1639 aa22.29■■□□□ 1.16
PLS1-205ENST00000464320 ARHGEF11O15085 1522 aa22.29■■□□□ 1.16
PLS1-205ENST00000464320 TRIM41Q8WV44 630 aa22.28■■□□□ 1.16
PLS1-205ENST00000464320 ERICH3Q5RHP9 1530 aa22.21■■□□□ 1.15
PLS1-205ENST00000464320 CLASP1Q7Z460 1538 aa22.21■■□□□ 1.15
PLS1-205ENST00000464320 FHAD1B1AJZ9 1412 aa22.16■■□□□ 1.14
PLS1-205ENST00000464320 ADAMTS12P58397 1594 aa22.16■■□□□ 1.14
PLS1-205ENST00000464320 GRIN2AQ12879 1464 aa22.14■■□□□ 1.13
PLS1-205ENST00000464320 NUP160Q12769 1436 aa22.07■■□□□ 1.12
PLS1-205ENST00000464320 CYB5RLQ6IPT4 315 aa22.06■■□□□ 1.12
PLS1-205ENST00000464320 ARAP1Q96P48 1450 aa22.06■■□□□ 1.12
PLS1-205ENST00000464320 KIF27Q86VH2 1401 aa22.06■■□□□ 1.12
PLS1-205ENST00000464320 CEP170Q5SW79 1584 aa21.98■■□□□ 1.11
PLS1-205ENST00000464320 CUL7Q14999 1698 aa21.96■■□□□ 1.11
PLS1-205ENST00000464320 IGF1RP08069 1367 aa21.94■■□□□ 1.1
PLS1-205ENST00000464320 SHROOM2Q13796 1616 aa21.93■■□□□ 1.1
PLS1-205ENST00000464320 JPH4Q96JJ6 628 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms