RNA–Protein interactions for RNA: ENST00000464317.3

RN7SL541P-201, Transcript of RNA, 7SL, cytoplasmic 541, pseudogene, humanhuman

BASIC

Gene RN7SL541P, Length 283 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL541P-201ENST00000464317 NISCHQ9Y2I1 1504 aa22.87■■□□□ 1.25
RN7SL541P-201ENST00000464317 ABCC9O60706 1549 aa20.76■□□□□ 0.91
RN7SL541P-201ENST00000464317 CCDC180Q9P1Z9 1646 aa20.56■□□□□ 0.88
RN7SL541P-201ENST00000464317 RB1CC1Q8TDY2 1594 aa19.68■□□□□ 0.74
RN7SL541P-201ENST00000464317 DNAJC5BQ9UF47 199 aa19.59■□□□□ 0.73
RN7SL541P-201ENST00000464317 NACADO15069 1562 aa19.5■□□□□ 0.71
RN7SL541P-201ENST00000464317 DCAF8L2P0C7V8 631 aa19.46■□□□□ 0.71
RN7SL541P-201ENST00000464317 PABPN1Q86U42 306 aaKnown RBP eCLIP19.33■□□□□ 0.68
RN7SL541P-201ENST00000464317 UNC13AQ9UPW8 1703 aa19.17■□□□□ 0.66
RN7SL541P-201ENST00000464317 MYO15BQ96JP2 1530 aa19.16■□□□□ 0.66
RN7SL541P-201ENST00000464317 BICRAQ9NZM4 1560 aa19.07■□□□□ 0.64
RN7SL541P-201ENST00000464317 ZCCHC6Q5VYS8 1495 aaKnown RBP18.91■□□□□ 0.62
RN7SL541P-201ENST00000464317 DCAF1Q9Y4B6 1507 aa18.86■□□□□ 0.61
RN7SL541P-201ENST00000464317 SHROOM4Q9ULL8 1493 aa18.83■□□□□ 0.6
RN7SL541P-201ENST00000464317 SCRIBQ14160 1630 aa18.76■□□□□ 0.59
RN7SL541P-201ENST00000464317 CECR2Q9BXF3 1484 aa18.72■□□□□ 0.59
RN7SL541P-201ENST00000464317 CC2D2AQ9P2K1 1620 aa18.72■□□□□ 0.59
RN7SL541P-201ENST00000464317 EIF4G1Q04637 1599 aaKnown RBP18.64■□□□□ 0.58
RN7SL541P-201ENST00000464317 DNAJC5Q9H3Z4 198 aa18.12■□□□□ 0.49
RN7SL541P-201ENST00000464317 NCAPD3P42695 1498 aa18.01■□□□□ 0.47
RN7SL541P-201ENST00000464317 ERCC6Q03468 1493 aa17.96■□□□□ 0.47
RN7SL541P-201ENST00000464317 CUX2O14529 1486 aa17.95■□□□□ 0.46
RN7SL541P-201ENST00000464317 ATAD2BQ9ULI0 1458 aa17.94■□□□□ 0.46
RN7SL541P-201ENST00000464317 SMARCA2P51531 1590 aa17.87■□□□□ 0.45
RN7SL541P-201ENST00000464317 SMARCA4P51532 1647 aa17.87■□□□□ 0.45
RN7SL541P-201ENST00000464317 HMGXB3Q12766 1538 aa17.85■□□□□ 0.45
RN7SL541P-201ENST00000464317 NESP48681 1621 aa17.78■□□□□ 0.44
RN7SL541P-201ENST00000464317 BAZ1BQ9UIG0 1483 aaKnown RBP17.77■□□□□ 0.44
RN7SL541P-201ENST00000464317 BAZ1AQ9NRL2 1556 aaPredicted RBP17.77■□□□□ 0.44
RN7SL541P-201ENST00000464317 PEG3Q9GZU2 1588 aa17.67■□□□□ 0.42
RN7SL541P-201ENST00000464317 MROH2BQ7Z745 1585 aa17.62■□□□□ 0.41
RN7SL541P-201ENST00000464317 LAMC3Q9Y6N6 1575 aa17.62■□□□□ 0.41
RN7SL541P-201ENST00000464317 THOC2Q8NI27 1593 aaKnown RBP17.6■□□□□ 0.41
RN7SL541P-201ENST00000464317 PDS5BQ9NTI5 1447 aa17.56■□□□□ 0.4
RN7SL541P-201ENST00000464317 KIF21AQ7Z4S6 1674 aa17.51■□□□□ 0.39
RN7SL541P-201ENST00000464317 CADPSQ9ULU8 1353 aa17.48■□□□□ 0.39
RN7SL541P-201ENST00000464317 MRC2Q9UBG0 1479 aa17.4■□□□□ 0.38
RN7SL541P-201ENST00000464317 WIZO95785 1651 aa17.39■□□□□ 0.37
RN7SL541P-201ENST00000464317 WDR62O43379 1518 aa17.34■□□□□ 0.37
RN7SL541P-201ENST00000464317 TRIM41Q8WV44 630 aa17.31■□□□□ 0.36
RN7SL541P-201ENST00000464317 CEP164Q9UPV0 1460 aa17.31■□□□□ 0.36
RN7SL541P-201ENST00000464317 FANCD2Q9BXW9 1451 aa17.27■□□□□ 0.36
RN7SL541P-201ENST00000464317 CFTRP13569 1480 aa17.23■□□□□ 0.35
RN7SL541P-201ENST00000464317 RSF1Q96T23 1441 aaPredicted RBP17.21■□□□□ 0.35
RN7SL541P-201ENST00000464317 TOP2AP11388 1531 aaKnown RBP17.17■□□□□ 0.34
RN7SL541P-201ENST00000464317 OSCARQ8IYS5 282 aa17.14■□□□□ 0.33
RN7SL541P-201ENST00000464317 URB2Q14146 1524 aaKnown RBP17.12■□□□□ 0.33
RN7SL541P-201ENST00000464317 CCDC88BA6NC98 1476 aa16.99■□□□□ 0.31
RN7SL541P-201ENST00000464317 PRDM2Q13029 1718 aa16.99■□□□□ 0.31
RN7SL541P-201ENST00000464317 IFT140Q96RY7 1462 aa16.97■□□□□ 0.31
RN7SL541P-201ENST00000464317 ZNF608Q9ULD9 1512 aaPredicted RBP16.95■□□□□ 0.3
RN7SL541P-201ENST00000464317 TOPBP1Q92547 1522 aa16.91■□□□□ 0.3
RN7SL541P-201ENST00000464317 ABCC8Q09428 1581 aa16.88■□□□□ 0.29
RN7SL541P-201ENST00000464317 RIMBP3CA6NJZ7 1639 aa16.88■□□□□ 0.29
RN7SL541P-201ENST00000464317 RIMBP3BA6NNM3 1639 aa16.88■□□□□ 0.29
RN7SL541P-201ENST00000464317 RIMBP3Q9UFD9 1639 aa16.88■□□□□ 0.29
RN7SL541P-201ENST00000464317 DNMBPQ6XZF7 1577 aa16.84■□□□□ 0.29
RN7SL541P-201ENST00000464317 EIF4G3O43432 1585 aaKnown RBP16.82■□□□□ 0.28
RN7SL541P-201ENST00000464317 ARHGEF11O15085 1522 aa16.82■□□□□ 0.28
RN7SL541P-201ENST00000464317 AQRO60306 1485 aaKnown RBP eCLIP16.79■□□□□ 0.28
RN7SL541P-201ENST00000464317 FBLN2P98095 1184 aa16.76■□□□□ 0.27
RN7SL541P-201ENST00000464317 CYB5RLQ6IPT4 315 aa16.76■□□□□ 0.27
RN7SL541P-201ENST00000464317 TARBP1Q13395 1621 aaKnown RBP16.75■□□□□ 0.27
RN7SL541P-201ENST00000464317 POLA1P09884 1462 aaPredicted RBP16.73■□□□□ 0.27
RN7SL541P-201ENST00000464317 CHD1O14646 1710 aa16.71■□□□□ 0.27
RN7SL541P-201ENST00000464317 RAD54L2Q9Y4B4 1467 aa16.69■□□□□ 0.26
RN7SL541P-201ENST00000464317 SOGA1O94964 1423 aa16.68■□□□□ 0.26
RN7SL541P-201ENST00000464317 TDRD9Q8NDG6 1382 aaKnown RBP16.67■□□□□ 0.26
RN7SL541P-201ENST00000464317 ARAP1Q96P48 1450 aa16.65■□□□□ 0.26
RN7SL541P-201ENST00000464317 TRHP20396 242 aaPredicted RBP16.64■□□□□ 0.25
RN7SL541P-201ENST00000464317 SNAPC4Q5SXM2 1469 aa16.61■□□□□ 0.25
RN7SL541P-201ENST00000464317 FGD5Q6ZNL6 1462 aa16.61■□□□□ 0.25
RN7SL541P-201ENST00000464317 CHMP7Q8WUX9 453 aaPredicted RBP16.6■□□□□ 0.25
RN7SL541P-201ENST00000464317 WDR97A6NE52 1622 aa16.58■□□□□ 0.24
RN7SL541P-201ENST00000464317 CUX1P39880 1505 aa16.56■□□□□ 0.24
RN7SL541P-201ENST00000464317 MAGI1Q96QZ7 1491 aaPredicted RBP16.55■□□□□ 0.24
RN7SL541P-201ENST00000464317 GRIN2BQ13224 1484 aa16.54■□□□□ 0.24
RN7SL541P-201ENST00000464317 SYNJ1O43426 1573 aa16.54■□□□□ 0.24
RN7SL541P-201ENST00000464317 CLASP1Q7Z460 1538 aa16.53■□□□□ 0.24
RN7SL541P-201ENST00000464317 SYNJ2O15056 1496 aa16.5■□□□□ 0.23
RN7SL541P-201ENST00000464317 GAPVD1Q14C86 1478 aa16.47■□□□□ 0.23
RN7SL541P-201ENST00000464317 PBRM1Q86U86 1689 aa16.43■□□□□ 0.22
RN7SL541P-201ENST00000464317 ABCA10Q8WWZ4 1543 aa16.41■□□□□ 0.22
RN7SL541P-201ENST00000464317 SUPT5HO00267 1087 aaKnown RBP16.4■□□□□ 0.22
RN7SL541P-201ENST00000464317 ABCA5Q8WWZ7 1642 aa16.38■□□□□ 0.21
RN7SL541P-201ENST00000464317 WRNQ14191 1432 aaPredicted RBP eCLIP16.34■□□□□ 0.21
RN7SL541P-201ENST00000464317 GRIN2AQ12879 1464 aa16.32■□□□□ 0.2
RN7SL541P-201ENST00000464317 AEBP2Q6ZN18 517 aaPredicted RBP16.28■□□□□ 0.2
RN7SL541P-201ENST00000464317 ADAMTS12P58397 1594 aa16.28■□□□□ 0.2
RN7SL541P-201ENST00000464317 ERCC6L2Q5T890 1561 aa16.27■□□□□ 0.2
RN7SL541P-201ENST00000464317 NUP160Q12769 1436 aa16.27■□□□□ 0.19
RN7SL541P-201ENST00000464317 FHAD1B1AJZ9 1412 aa16.26■□□□□ 0.19
RN7SL541P-201ENST00000464317 CEP170Q5SW79 1584 aa16.26■□□□□ 0.19
RN7SL541P-201ENST00000464317 TOP2BQ02880 1626 aa16.25■□□□□ 0.19
RN7SL541P-201ENST00000464317 BIVM-ERCC5R4GMW8 1640 aa16.24■□□□□ 0.19
RN7SL541P-201ENST00000464317 ERICH3Q5RHP9 1530 aa16.2■□□□□ 0.18
RN7SL541P-201ENST00000464317 SHROOM2Q13796 1616 aa16.18■□□□□ 0.18
RN7SL541P-201ENST00000464317 PRG4Q92954 1404 aaPredicted RBP16.15■□□□□ 0.18
RN7SL541P-201ENST00000464317 JPH4Q96JJ6 628 aa16.13■□□□□ 0.17
RN7SL541P-201ENST00000464317 NPM1P06748 294 aaKnown RBP eCLIP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms