RNA–Protein interactions for RNA: ENST00000464045.1

THUMPD3-208, Transcript of THUMP domain containing 3, humanhuman

TSL 2

Gene THUMPD3, Length 601 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-208ENST00000464045 NISCHQ9Y2I1 1504 aa18.17■□□□□ 0.5
THUMPD3-208ENST00000464045 CCDC180Q9P1Z9 1646 aa16.19■□□□□ 0.18
THUMPD3-208ENST00000464045 AEBP2Q6ZN18 517 aaPredicted RBP16.18■□□□□ 0.18
THUMPD3-208ENST00000464045 ABCC9O60706 1549 aa16.09■□□□□ 0.17
THUMPD3-208ENST00000464045 RB1CC1Q8TDY2 1594 aa15.28■□□□□ 0.04
THUMPD3-208ENST00000464045 NACADO15069 1562 aa15.26■□□□□ 0.03
THUMPD3-208ENST00000464045 DNAJC5BQ9UF47 199 aa15.22■□□□□ 0.03
THUMPD3-208ENST00000464045 MYO15BQ96JP2 1530 aa15.19■□□□□ 0.02
THUMPD3-208ENST00000464045 DCAF8L2P0C7V8 631 aa15.16■□□□□ 0.02
THUMPD3-208ENST00000464045 ZCCHC6Q5VYS8 1495 aaKnown RBP15.13■□□□□ 0.01
THUMPD3-208ENST00000464045 DCAF1Q9Y4B6 1507 aa15.08■□□□□ 0.01
THUMPD3-208ENST00000464045 CHIC1Q5VXU3 224 aa15.07■□□□□ 0
THUMPD3-208ENST00000464045 PABPN1Q86U42 306 aaKnown RBP eCLIP15.02■□□□□ -0
THUMPD3-208ENST00000464045 UNC13AQ9UPW8 1703 aa14.86□□□□□ -0.03
THUMPD3-208ENST00000464045 BICRAQ9NZM4 1560 aa14.77□□□□□ -0.04
THUMPD3-208ENST00000464045 SHROOM4Q9ULL8 1493 aa14.73□□□□□ -0.05
THUMPD3-208ENST00000464045 SCRIBQ14160 1630 aa14.71□□□□□ -0.05
THUMPD3-208ENST00000464045 CC2D2AQ9P2K1 1620 aa14.47□□□□□ -0.09
THUMPD3-208ENST00000464045 CECR2Q9BXF3 1484 aa14.45□□□□□ -0.1
THUMPD3-208ENST00000464045 EIF4G1Q04637 1599 aaKnown RBP14.4□□□□□ -0.1
THUMPD3-208ENST00000464045 POTEDQ86YR6 584 aa14.21□□□□□ -0.13
THUMPD3-208ENST00000464045 BAZ1AQ9NRL2 1556 aaPredicted RBP14.1□□□□□ -0.15
THUMPD3-208ENST00000464045 SMARCA4P51532 1647 aa14.09□□□□□ -0.15
THUMPD3-208ENST00000464045 NCAPD3P42695 1498 aa14.08□□□□□ -0.16
THUMPD3-208ENST00000464045 ATAD2BQ9ULI0 1458 aa14.06□□□□□ -0.16
THUMPD3-208ENST00000464045 SMARCA2P51531 1590 aa14.05□□□□□ -0.16
THUMPD3-208ENST00000464045 PEG3Q9GZU2 1588 aa14□□□□□ -0.17
THUMPD3-208ENST00000464045 HMGXB3Q12766 1538 aa14□□□□□ -0.17
THUMPD3-208ENST00000464045 MROH2BQ7Z745 1585 aa13.97□□□□□ -0.17
THUMPD3-208ENST00000464045 DNAJC5Q9H3Z4 198 aa13.97□□□□□ -0.17
THUMPD3-208ENST00000464045 SENP3Q9H4L4 574 aaPredicted RBP13.94□□□□□ -0.18
THUMPD3-208ENST00000464045 BAZ1BQ9UIG0 1483 aaKnown RBP13.93□□□□□ -0.18
THUMPD3-208ENST00000464045 ERCC6Q03468 1493 aa13.88□□□□□ -0.19
THUMPD3-208ENST00000464045 RSF1Q96T23 1441 aaPredicted RBP13.81□□□□□ -0.2
THUMPD3-208ENST00000464045 NESP48681 1621 aa13.79□□□□□ -0.2
THUMPD3-208ENST00000464045 WIZO95785 1651 aa13.79□□□□□ -0.2
THUMPD3-208ENST00000464045 CUX2O14529 1486 aa13.78□□□□□ -0.2
THUMPD3-208ENST00000464045 LAMC3Q9Y6N6 1575 aa13.71□□□□□ -0.22
THUMPD3-208ENST00000464045 TOP2AP11388 1531 aaKnown RBP13.69□□□□□ -0.22
THUMPD3-208ENST00000464045 CADPSQ9ULU8 1353 aa13.66□□□□□ -0.22
THUMPD3-208ENST00000464045 PDS5BQ9NTI5 1447 aa13.64□□□□□ -0.23
THUMPD3-208ENST00000464045 PHF23Q9BUL5 403 aaPredicted RBP13.63□□□□□ -0.23
THUMPD3-208ENST00000464045 THOC2Q8NI27 1593 aaKnown RBP13.58□□□□□ -0.23
THUMPD3-208ENST00000464045 KIF21AQ7Z4S6 1674 aa13.57□□□□□ -0.24
THUMPD3-208ENST00000464045 CFTRP13569 1480 aa13.56□□□□□ -0.24
THUMPD3-208ENST00000464045 CCDC88BA6NC98 1476 aa13.52□□□□□ -0.25
THUMPD3-208ENST00000464045 FANCD2Q9BXW9 1451 aa13.48□□□□□ -0.25
THUMPD3-208ENST00000464045 MRC2Q9UBG0 1479 aa13.48□□□□□ -0.25
THUMPD3-208ENST00000464045 CEP164Q9UPV0 1460 aa13.48□□□□□ -0.25
THUMPD3-208ENST00000464045 TRIM41Q8WV44 630 aa13.47□□□□□ -0.25
THUMPD3-208ENST00000464045 WDR62O43379 1518 aa13.44□□□□□ -0.26
THUMPD3-208ENST00000464045 PRDM2Q13029 1718 aa13.4□□□□□ -0.26
THUMPD3-208ENST00000464045 SUPT5HO00267 1087 aaKnown RBP13.35□□□□□ -0.27
THUMPD3-208ENST00000464045 URB2Q14146 1524 aaKnown RBP13.34□□□□□ -0.27
THUMPD3-208ENST00000464045 ABCC8Q09428 1581 aa13.3□□□□□ -0.28
THUMPD3-208ENST00000464045 TOPBP1Q92547 1522 aa13.25□□□□□ -0.29
THUMPD3-208ENST00000464045 DNMBPQ6XZF7 1577 aa13.24□□□□□ -0.29
THUMPD3-208ENST00000464045 IFT140Q96RY7 1462 aa13.22□□□□□ -0.29
THUMPD3-208ENST00000464045 OSCARQ8IYS5 282 aa13.21□□□□□ -0.29
THUMPD3-208ENST00000464045 FOXD1Q16676 465 aa13.15□□□□□ -0.3
THUMPD3-208ENST00000464045 POLA1P09884 1462 aaPredicted RBP13.14□□□□□ -0.31
THUMPD3-208ENST00000464045 ZNF608Q9ULD9 1512 aaPredicted RBP13.13□□□□□ -0.31
THUMPD3-208ENST00000464045 CUX1P39880 1505 aa13.12□□□□□ -0.31
THUMPD3-208ENST00000464045 TARBP1Q13395 1621 aaKnown RBP13.1□□□□□ -0.31
THUMPD3-208ENST00000464045 SOGA1O94964 1423 aa13.09□□□□□ -0.31
THUMPD3-208ENST00000464045 FGD5Q6ZNL6 1462 aa13.09□□□□□ -0.31
THUMPD3-208ENST00000464045 WDR97A6NE52 1622 aa13.06□□□□□ -0.32
THUMPD3-208ENST00000464045 EIF4G3O43432 1585 aaKnown RBP13.06□□□□□ -0.32
THUMPD3-208ENST00000464045 RIMBP3CA6NJZ7 1639 aa13.06□□□□□ -0.32
THUMPD3-208ENST00000464045 RIMBP3BA6NNM3 1639 aa13.06□□□□□ -0.32
THUMPD3-208ENST00000464045 RIMBP3Q9UFD9 1639 aa13.06□□□□□ -0.32
THUMPD3-208ENST00000464045 RAD54L2Q9Y4B4 1467 aa13.05□□□□□ -0.32
THUMPD3-208ENST00000464045 FBLN2P98095 1184 aa13.03□□□□□ -0.32
THUMPD3-208ENST00000464045 WRNQ14191 1432 aaPredicted RBP eCLIP13.03□□□□□ -0.32
THUMPD3-208ENST00000464045 AQRO60306 1485 aaKnown RBP eCLIP13.03□□□□□ -0.32
THUMPD3-208ENST00000464045 TOP2BQ02880 1626 aa13.01□□□□□ -0.33
THUMPD3-208ENST00000464045 BIVM-ERCC5R4GMW8 1640 aa12.99□□□□□ -0.33
THUMPD3-208ENST00000464045 ABCA10Q8WWZ4 1543 aa12.99□□□□□ -0.33
THUMPD3-208ENST00000464045 TDRD9Q8NDG6 1382 aaKnown RBP12.99□□□□□ -0.33
THUMPD3-208ENST00000464045 CYB5RLQ6IPT4 315 aa12.99□□□□□ -0.33
THUMPD3-208ENST00000464045 ARHGEF11O15085 1522 aa12.98□□□□□ -0.33
THUMPD3-208ENST00000464045 SYNJ1O43426 1573 aa12.97□□□□□ -0.33
THUMPD3-208ENST00000464045 CHD1O14646 1710 aa12.96□□□□□ -0.33
THUMPD3-208ENST00000464045 GRIN2BQ13224 1484 aa12.96□□□□□ -0.34
THUMPD3-208ENST00000464045 MAGI1Q96QZ7 1491 aaPredicted RBP12.94□□□□□ -0.34
THUMPD3-208ENST00000464045 GAPVD1Q14C86 1478 aa12.93□□□□□ -0.34
THUMPD3-208ENST00000464045 SNAPC4Q5SXM2 1469 aa12.92□□□□□ -0.34
THUMPD3-208ENST00000464045 ABCA5Q8WWZ7 1642 aa12.92□□□□□ -0.34
THUMPD3-208ENST00000464045 TRHP20396 242 aaPredicted RBP12.92□□□□□ -0.34
THUMPD3-208ENST00000464045 SYNJ2O15056 1496 aa12.88□□□□□ -0.35
THUMPD3-208ENST00000464045 ARAP1Q96P48 1450 aa12.87□□□□□ -0.35
THUMPD3-208ENST00000464045 PBRM1Q86U86 1689 aa12.86□□□□□ -0.35
THUMPD3-208ENST00000464045 CHMP7Q8WUX9 453 aaPredicted RBP12.86□□□□□ -0.35
THUMPD3-208ENST00000464045 ERICH3Q5RHP9 1530 aa12.84□□□□□ -0.35
THUMPD3-208ENST00000464045 FHAD1B1AJZ9 1412 aa12.8□□□□□ -0.36
THUMPD3-208ENST00000464045 ADAMTS12P58397 1594 aa12.8□□□□□ -0.36
THUMPD3-208ENST00000464045 CLASP1Q7Z460 1538 aa12.79□□□□□ -0.36
THUMPD3-208ENST00000464045 KIF27Q86VH2 1401 aa12.78□□□□□ -0.36
THUMPD3-208ENST00000464045 GRIN2AQ12879 1464 aa12.78□□□□□ -0.36
THUMPD3-208ENST00000464045 NUP160Q12769 1436 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms