RNA–Protein interactions for RNA: ENST00000463934.1

APOBEC3G-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3G, humanhuman

TSL 2

Gene APOBEC3G, Length 1,081 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3G-203ENST00000463934 NISCHQ9Y2I1 1504 aa31.46■■■□□ 2.63
APOBEC3G-203ENST00000463934 CCDC180Q9P1Z9 1646 aa28.03■■■□□ 2.08
APOBEC3G-203ENST00000463934 ABCC9O60706 1549 aa27.35■■□□□ 1.97
APOBEC3G-203ENST00000463934 RB1CC1Q8TDY2 1594 aa26.38■■□□□ 1.81
APOBEC3G-203ENST00000463934 NACADO15069 1562 aa26.34■■□□□ 1.81
APOBEC3G-203ENST00000463934 DCAF8L2P0C7V8 631 aa26.25■■□□□ 1.79
APOBEC3G-203ENST00000463934 ZCCHC6Q5VYS8 1495 aaKnown RBP26.23■■□□□ 1.79
APOBEC3G-203ENST00000463934 MYO15BQ96JP2 1530 aa26.2■■□□□ 1.79
APOBEC3G-203ENST00000463934 DCAF1Q9Y4B6 1507 aa26.09■■□□□ 1.77
APOBEC3G-203ENST00000463934 UNC13AQ9UPW8 1703 aa25.68■■□□□ 1.7
APOBEC3G-203ENST00000463934 PABPN1Q86U42 306 aaKnown RBP eCLIP25.52■■□□□ 1.68
APOBEC3G-203ENST00000463934 SCRIBQ14160 1630 aa25.52■■□□□ 1.68
APOBEC3G-203ENST00000463934 BICRAQ9NZM4 1560 aa25.5■■□□□ 1.67
APOBEC3G-203ENST00000463934 SHROOM4Q9ULL8 1493 aa25.37■■□□□ 1.65
APOBEC3G-203ENST00000463934 DNAJC5BQ9UF47 199 aa25.01■■□□□ 1.59
APOBEC3G-203ENST00000463934 EIF4G1Q04637 1599 aaKnown RBP24.86■■□□□ 1.57
APOBEC3G-203ENST00000463934 CC2D2AQ9P2K1 1620 aa24.75■■□□□ 1.55
APOBEC3G-203ENST00000463934 AEBP2Q6ZN18 517 aaPredicted RBP24.72■■□□□ 1.55
APOBEC3G-203ENST00000463934 CECR2Q9BXF3 1484 aa24.6■■□□□ 1.53
APOBEC3G-203ENST00000463934 BAZ1AQ9NRL2 1556 aaPredicted RBP24.42■■□□□ 1.5
APOBEC3G-203ENST00000463934 SMARCA4P51532 1647 aa24.42■■□□□ 1.5
APOBEC3G-203ENST00000463934 SMARCA2P51531 1590 aa24.31■■□□□ 1.48
APOBEC3G-203ENST00000463934 NCAPD3P42695 1498 aa24.28■■□□□ 1.48
APOBEC3G-203ENST00000463934 ATAD2BQ9ULI0 1458 aa24.28■■□□□ 1.48
APOBEC3G-203ENST00000463934 MROH2BQ7Z745 1585 aa24.21■■□□□ 1.47
APOBEC3G-203ENST00000463934 PEG3Q9GZU2 1588 aa24.2■■□□□ 1.46
APOBEC3G-203ENST00000463934 HMGXB3Q12766 1538 aa24.2■■□□□ 1.46
APOBEC3G-203ENST00000463934 BAZ1BQ9UIG0 1483 aaKnown RBP24.11■■□□□ 1.45
APOBEC3G-203ENST00000463934 RSF1Q96T23 1441 aaPredicted RBP23.95■■□□□ 1.42
APOBEC3G-203ENST00000463934 WIZO95785 1651 aa23.95■■□□□ 1.42
APOBEC3G-203ENST00000463934 TOP2AP11388 1531 aaKnown RBP23.76■■□□□ 1.39
APOBEC3G-203ENST00000463934 LAMC3Q9Y6N6 1575 aa23.67■■□□□ 1.38
APOBEC3G-203ENST00000463934 ERCC6Q03468 1493 aa23.63■■□□□ 1.37
APOBEC3G-203ENST00000463934 NESP48681 1621 aa23.63■■□□□ 1.37
APOBEC3G-203ENST00000463934 CADPSQ9ULU8 1353 aa23.57■■□□□ 1.36
APOBEC3G-203ENST00000463934 PDS5BQ9NTI5 1447 aa23.52■■□□□ 1.36
APOBEC3G-203ENST00000463934 CHIC1Q5VXU3 224 aa23.51■■□□□ 1.35
APOBEC3G-203ENST00000463934 CCDC88BA6NC98 1476 aa23.43■■□□□ 1.34
APOBEC3G-203ENST00000463934 CFTRP13569 1480 aa23.43■■□□□ 1.34
APOBEC3G-203ENST00000463934 CUX2O14529 1486 aa23.4■■□□□ 1.34
APOBEC3G-203ENST00000463934 KIF21AQ7Z4S6 1674 aa23.38■■□□□ 1.33
APOBEC3G-203ENST00000463934 THOC2Q8NI27 1593 aaKnown RBP23.33■■□□□ 1.33
APOBEC3G-203ENST00000463934 SUPT5HO00267 1087 aaKnown RBP23.32■■□□□ 1.32
APOBEC3G-203ENST00000463934 FANCD2Q9BXW9 1451 aa23.3■■□□□ 1.32
APOBEC3G-203ENST00000463934 CEP164Q9UPV0 1460 aa23.3■■□□□ 1.32
APOBEC3G-203ENST00000463934 PRDM2Q13029 1718 aa23.28■■□□□ 1.32
APOBEC3G-203ENST00000463934 MRC2Q9UBG0 1479 aa23.26■■□□□ 1.31
APOBEC3G-203ENST00000463934 WDR62O43379 1518 aa23.18■■□□□ 1.3
APOBEC3G-203ENST00000463934 URB2Q14146 1524 aaKnown RBP23.04■■□□□ 1.28
APOBEC3G-203ENST00000463934 ABCC8Q09428 1581 aa22.98■■□□□ 1.27
APOBEC3G-203ENST00000463934 DNMBPQ6XZF7 1577 aa22.93■■□□□ 1.26
APOBEC3G-203ENST00000463934 TOPBP1Q92547 1522 aa22.92■■□□□ 1.26
APOBEC3G-203ENST00000463934 IFT140Q96RY7 1462 aa22.82■■□□□ 1.24
APOBEC3G-203ENST00000463934 CUX1P39880 1505 aa22.73■■□□□ 1.23
APOBEC3G-203ENST00000463934 POLA1P09884 1462 aaPredicted RBP22.73■■□□□ 1.23
APOBEC3G-203ENST00000463934 FGD5Q6ZNL6 1462 aa22.67■■□□□ 1.22
APOBEC3G-203ENST00000463934 TARBP1Q13395 1621 aaKnown RBP22.66■■□□□ 1.22
APOBEC3G-203ENST00000463934 SOGA1O94964 1423 aa22.64■■□□□ 1.21
APOBEC3G-203ENST00000463934 ZNF608Q9ULD9 1512 aaPredicted RBP22.63■■□□□ 1.21
APOBEC3G-203ENST00000463934 WRNQ14191 1432 aaPredicted RBP eCLIP22.62■■□□□ 1.21
APOBEC3G-203ENST00000463934 DNAJC5Q9H3Z4 198 aa22.61■■□□□ 1.21
APOBEC3G-203ENST00000463934 EIF4G3O43432 1585 aaKnown RBP22.59■■□□□ 1.21
APOBEC3G-203ENST00000463934 RAD54L2Q9Y4B4 1467 aa22.59■■□□□ 1.21
APOBEC3G-203ENST00000463934 WDR97A6NE52 1622 aa22.57■■□□□ 1.2
APOBEC3G-203ENST00000463934 TOP2BQ02880 1626 aa22.57■■□□□ 1.2
APOBEC3G-203ENST00000463934 BIVM-ERCC5R4GMW8 1640 aa22.57■■□□□ 1.2
APOBEC3G-203ENST00000463934 SYNJ1O43426 1573 aa22.52■■□□□ 1.2
APOBEC3G-203ENST00000463934 AQRO60306 1485 aaKnown RBP eCLIP22.52■■□□□ 1.2
APOBEC3G-203ENST00000463934 TDRD9Q8NDG6 1382 aaKnown RBP22.48■■□□□ 1.19
APOBEC3G-203ENST00000463934 ABCA10Q8WWZ4 1543 aa22.47■■□□□ 1.19
APOBEC3G-203ENST00000463934 GRIN2BQ13224 1484 aa22.41■■□□□ 1.18
APOBEC3G-203ENST00000463934 OSCARQ8IYS5 282 aa22.39■■□□□ 1.17
APOBEC3G-203ENST00000463934 GAPVD1Q14C86 1478 aa22.38■■□□□ 1.17
APOBEC3G-203ENST00000463934 ABCA5Q8WWZ7 1642 aa22.37■■□□□ 1.17
APOBEC3G-203ENST00000463934 MAGI1Q96QZ7 1491 aaPredicted RBP22.35■■□□□ 1.17
APOBEC3G-203ENST00000463934 SNAPC4Q5SXM2 1469 aa22.34■■□□□ 1.17
APOBEC3G-203ENST00000463934 PBRM1Q86U86 1689 aa22.33■■□□□ 1.17
APOBEC3G-203ENST00000463934 CHD1O14646 1710 aa22.28■■□□□ 1.16
APOBEC3G-203ENST00000463934 FBLN2P98095 1184 aa22.27■■□□□ 1.16
APOBEC3G-203ENST00000463934 SYNJ2O15056 1496 aa22.26■■□□□ 1.15
APOBEC3G-203ENST00000463934 CHMP7Q8WUX9 453 aaPredicted RBP22.23■■□□□ 1.15
APOBEC3G-203ENST00000463934 ERICH3Q5RHP9 1530 aa22.22■■□□□ 1.15
APOBEC3G-203ENST00000463934 ADAMTS12P58397 1594 aa22.17■■□□□ 1.14
APOBEC3G-203ENST00000463934 KIF27Q86VH2 1401 aa22.16■■□□□ 1.14
APOBEC3G-203ENST00000463934 FHAD1B1AJZ9 1412 aa22.14■■□□□ 1.14
APOBEC3G-203ENST00000463934 GRIN2AQ12879 1464 aa22.1■■□□□ 1.13
APOBEC3G-203ENST00000463934 CLASP1Q7Z460 1538 aa22.07■■□□□ 1.12
APOBEC3G-203ENST00000463934 TRIM41Q8WV44 630 aa22.07■■□□□ 1.12
APOBEC3G-203ENST00000463934 CUL7Q14999 1698 aa22.04■■□□□ 1.12
APOBEC3G-203ENST00000463934 ARHGEF11O15085 1522 aa22.02■■□□□ 1.12
APOBEC3G-203ENST00000463934 RIMBP3CA6NJZ7 1639 aa22.02■■□□□ 1.11
APOBEC3G-203ENST00000463934 RIMBP3BA6NNM3 1639 aa22.02■■□□□ 1.11
APOBEC3G-203ENST00000463934 RIMBP3Q9UFD9 1639 aa22.02■■□□□ 1.11
APOBEC3G-203ENST00000463934 IGF1RP08069 1367 aa22.01■■□□□ 1.11
APOBEC3G-203ENST00000463934 NUP160Q12769 1436 aa21.99■■□□□ 1.11
APOBEC3G-203ENST00000463934 CEP170Q5SW79 1584 aa21.96■■□□□ 1.11
APOBEC3G-203ENST00000463934 CARMIL1Q5VZK9 1371 aa21.91■■□□□ 1.1
APOBEC3G-203ENST00000463934 RUSC2Q8N2Y8 1516 aa21.85■■□□□ 1.09
APOBEC3G-203ENST00000463934 ARAP1Q96P48 1450 aa21.83■■□□□ 1.09
APOBEC3G-203ENST00000463934 SHROOM2Q13796 1616 aa21.83■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms