RNA–Protein interactions for RNA: ENST00000463905.1

ARHGAP4-216, Transcript of Rho GTPase activating protein 4, humanhuman

TSL 3

Gene ARHGAP4, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP4-216ENST00000463905 NISCHQ9Y2I1 1504 aa27■■□□□ 1.91
ARHGAP4-216ENST00000463905 ABCC9O60706 1549 aa25.35■■□□□ 1.65
ARHGAP4-216ENST00000463905 CCDC180Q9P1Z9 1646 aa24.52■■□□□ 1.52
ARHGAP4-216ENST00000463905 DNAJC5BQ9UF47 199 aa24.49■■□□□ 1.51
ARHGAP4-216ENST00000463905 RB1CC1Q8TDY2 1594 aa23.75■■□□□ 1.39
ARHGAP4-216ENST00000463905 PABPN1Q86U42 306 aaKnown RBP eCLIP23.49■■□□□ 1.35
ARHGAP4-216ENST00000463905 NACADO15069 1562 aa23.4■■□□□ 1.34
ARHGAP4-216ENST00000463905 DCAF8L2P0C7V8 631 aa23.15■■□□□ 1.3
ARHGAP4-216ENST00000463905 UNC13AQ9UPW8 1703 aa23.11■■□□□ 1.29
ARHGAP4-216ENST00000463905 BICRAQ9NZM4 1560 aa23.09■■□□□ 1.29
ARHGAP4-216ENST00000463905 DNAJC5Q9H3Z4 198 aa23.07■■□□□ 1.28
ARHGAP4-216ENST00000463905 CECR2Q9BXF3 1484 aa22.92■■□□□ 1.26
ARHGAP4-216ENST00000463905 MYO15BQ96JP2 1530 aa22.83■■□□□ 1.25
ARHGAP4-216ENST00000463905 CC2D2AQ9P2K1 1620 aa22.82■■□□□ 1.24
ARHGAP4-216ENST00000463905 SHROOM4Q9ULL8 1493 aa22.73■■□□□ 1.23
ARHGAP4-216ENST00000463905 EIF4G1Q04637 1599 aaKnown RBP22.6■■□□□ 1.21
ARHGAP4-216ENST00000463905 SCRIBQ14160 1630 aa22.31■■□□□ 1.16
ARHGAP4-216ENST00000463905 DCAF1Q9Y4B6 1507 aa22.25■■□□□ 1.15
ARHGAP4-216ENST00000463905 ZCCHC6Q5VYS8 1495 aaKnown RBP22.21■■□□□ 1.15
ARHGAP4-216ENST00000463905 CUX2O14529 1486 aa22.17■■□□□ 1.14
ARHGAP4-216ENST00000463905 ERCC6Q03468 1493 aa21.95■■□□□ 1.1
ARHGAP4-216ENST00000463905 TRIM41Q8WV44 630 aa21.73■■□□□ 1.07
ARHGAP4-216ENST00000463905 NCAPD3P42695 1498 aa21.64■■□□□ 1.06
ARHGAP4-216ENST00000463905 NESP48681 1621 aa21.54■■□□□ 1.04
ARHGAP4-216ENST00000463905 THOC2Q8NI27 1593 aaKnown RBP21.46■■□□□ 1.03
ARHGAP4-216ENST00000463905 ATAD2BQ9ULI0 1458 aa21.45■■□□□ 1.03
ARHGAP4-216ENST00000463905 HMGXB3Q12766 1538 aa21.39■■□□□ 1.01
ARHGAP4-216ENST00000463905 SMARCA2P51531 1590 aa21.34■■□□□ 1.01
ARHGAP4-216ENST00000463905 LAMC3Q9Y6N6 1575 aa21.25■□□□□ 0.99
ARHGAP4-216ENST00000463905 BAZ1BQ9UIG0 1483 aaKnown RBP21.2■□□□□ 0.98
ARHGAP4-216ENST00000463905 SMARCA4P51532 1647 aa21.2■□□□□ 0.98
ARHGAP4-216ENST00000463905 PDS5BQ9NTI5 1447 aa21.19■□□□□ 0.98
ARHGAP4-216ENST00000463905 KIF21AQ7Z4S6 1674 aa21.17■□□□□ 0.98
ARHGAP4-216ENST00000463905 BAZ1AQ9NRL2 1556 aaPredicted RBP21.06■□□□□ 0.96
ARHGAP4-216ENST00000463905 MRC2Q9UBG0 1479 aa21.05■□□□□ 0.96
ARHGAP4-216ENST00000463905 OSCARQ8IYS5 282 aa21.04■□□□□ 0.96
ARHGAP4-216ENST00000463905 PEG3Q9GZU2 1588 aa21.02■□□□□ 0.95
ARHGAP4-216ENST00000463905 WDR62O43379 1518 aa21.01■□□□□ 0.95
ARHGAP4-216ENST00000463905 CADPSQ9ULU8 1353 aa20.95■□□□□ 0.94
ARHGAP4-216ENST00000463905 RIMBP3CA6NJZ7 1639 aa20.8■□□□□ 0.92
ARHGAP4-216ENST00000463905 RIMBP3BA6NNM3 1639 aa20.8■□□□□ 0.92
ARHGAP4-216ENST00000463905 RIMBP3Q9UFD9 1639 aa20.8■□□□□ 0.92
ARHGAP4-216ENST00000463905 CEP164Q9UPV0 1460 aa20.8■□□□□ 0.92
ARHGAP4-216ENST00000463905 MROH2BQ7Z745 1585 aa20.79■□□□□ 0.92
ARHGAP4-216ENST00000463905 FANCD2Q9BXW9 1451 aa20.7■□□□□ 0.9
ARHGAP4-216ENST00000463905 ARHGEF11O15085 1522 aa20.69■□□□□ 0.9
ARHGAP4-216ENST00000463905 TRHP20396 242 aaPredicted RBP20.63■□□□□ 0.89
ARHGAP4-216ENST00000463905 AEBP2Q6ZN18 517 aaPredicted RBP20.61■□□□□ 0.89
ARHGAP4-216ENST00000463905 CYB5RLQ6IPT4 315 aa20.6■□□□□ 0.89
ARHGAP4-216ENST00000463905 URB2Q14146 1524 aaKnown RBP20.58■□□□□ 0.88
ARHGAP4-216ENST00000463905 CFTRP13569 1480 aa20.54■□□□□ 0.88
ARHGAP4-216ENST00000463905 WIZO95785 1651 aa20.46■□□□□ 0.87
ARHGAP4-216ENST00000463905 ZNF608Q9ULD9 1512 aaPredicted RBP20.46■□□□□ 0.87
ARHGAP4-216ENST00000463905 ARAP1Q96P48 1450 aa20.43■□□□□ 0.86
ARHGAP4-216ENST00000463905 IFT140Q96RY7 1462 aa20.42■□□□□ 0.86
ARHGAP4-216ENST00000463905 RSF1Q96T23 1441 aaPredicted RBP20.32■□□□□ 0.84
ARHGAP4-216ENST00000463905 EIF4G3O43432 1585 aaKnown RBP20.28■□□□□ 0.84
ARHGAP4-216ENST00000463905 CHD1O14646 1710 aa20.22■□□□□ 0.83
ARHGAP4-216ENST00000463905 FBLN2P98095 1184 aa20.22■□□□□ 0.83
ARHGAP4-216ENST00000463905 TOPBP1Q92547 1522 aa20.22■□□□□ 0.83
ARHGAP4-216ENST00000463905 AQRO60306 1485 aaKnown RBP eCLIP20.18■□□□□ 0.82
ARHGAP4-216ENST00000463905 TOP2AP11388 1531 aaKnown RBP20.18■□□□□ 0.82
ARHGAP4-216ENST00000463905 PRDM2Q13029 1718 aa20.13■□□□□ 0.81
ARHGAP4-216ENST00000463905 ABCC8Q09428 1581 aa20.12■□□□□ 0.81
ARHGAP4-216ENST00000463905 TARBP1Q13395 1621 aaKnown RBP20.08■□□□□ 0.8
ARHGAP4-216ENST00000463905 DNMBPQ6XZF7 1577 aa20.06■□□□□ 0.8
ARHGAP4-216ENST00000463905 CLASP1Q7Z460 1538 aa20.05■□□□□ 0.8
ARHGAP4-216ENST00000463905 CCDC88BA6NC98 1476 aa19.98■□□□□ 0.79
ARHGAP4-216ENST00000463905 POLA1P09884 1462 aaPredicted RBP19.97■□□□□ 0.79
ARHGAP4-216ENST00000463905 SYNJ1O43426 1573 aa19.95■□□□□ 0.78
ARHGAP4-216ENST00000463905 SNAPC4Q5SXM2 1469 aa19.95■□□□□ 0.78
ARHGAP4-216ENST00000463905 TDRD9Q8NDG6 1382 aaKnown RBP19.95■□□□□ 0.78
ARHGAP4-216ENST00000463905 CHMP7Q8WUX9 453 aaPredicted RBP19.94■□□□□ 0.78
ARHGAP4-216ENST00000463905 GAPVD1Q14C86 1478 aa19.92■□□□□ 0.78
ARHGAP4-216ENST00000463905 RAD54L2Q9Y4B4 1467 aa19.91■□□□□ 0.78
ARHGAP4-216ENST00000463905 SOGA1O94964 1423 aa19.87■□□□□ 0.77
ARHGAP4-216ENST00000463905 MAGI1Q96QZ7 1491 aaPredicted RBP19.86■□□□□ 0.77
ARHGAP4-216ENST00000463905 ILDR1Q86SU0 546 aaPredicted RBP19.84■□□□□ 0.77
ARHGAP4-216ENST00000463905 SYNJ2O15056 1496 aa19.81■□□□□ 0.76
ARHGAP4-216ENST00000463905 WDR97A6NE52 1622 aa19.81■□□□□ 0.76
ARHGAP4-216ENST00000463905 GRIN2BQ13224 1484 aa19.79■□□□□ 0.76
ARHGAP4-216ENST00000463905 FGD5Q6ZNL6 1462 aa19.73■□□□□ 0.75
ARHGAP4-216ENST00000463905 ERCC6L2Q5T890 1561 aa19.67■□□□□ 0.74
ARHGAP4-216ENST00000463905 KDM4FA0A1W2PPD8 638 aa19.62■□□□□ 0.73
ARHGAP4-216ENST00000463905 KIF13AQ9H1H9 1805 aa19.59■□□□□ 0.73
ARHGAP4-216ENST00000463905 CUX1P39880 1505 aa19.57■□□□□ 0.72
ARHGAP4-216ENST00000463905 PBRM1Q86U86 1689 aa19.57■□□□□ 0.72
ARHGAP4-216ENST00000463905 CEP170Q5SW79 1584 aa19.57■□□□□ 0.72
ARHGAP4-216ENST00000463905 GRIN2AQ12879 1464 aa19.53■□□□□ 0.72
ARHGAP4-216ENST00000463905 FAM69CQ0P6D2 419 aa19.51■□□□□ 0.71
ARHGAP4-216ENST00000463905 NUP160Q12769 1436 aa19.5■□□□□ 0.71
ARHGAP4-216ENST00000463905 ABCC10Q5T3U5 1492 aa19.48■□□□□ 0.71
ARHGAP4-216ENST00000463905 ABCA5Q8WWZ7 1642 aa19.47■□□□□ 0.71
ARHGAP4-216ENST00000463905 ABCA10Q8WWZ4 1543 aa19.46■□□□□ 0.71
ARHGAP4-216ENST00000463905 SHROOM2Q13796 1616 aa19.46■□□□□ 0.71
ARHGAP4-216ENST00000463905 KDM6BO15054 1643 aa19.42■□□□□ 0.7
ARHGAP4-216ENST00000463905 ADAMTS12P58397 1594 aa19.4■□□□□ 0.7
ARHGAP4-216ENST00000463905 NPM1P06748 294 aaKnown RBP eCLIP19.38■□□□□ 0.69
ARHGAP4-216ENST00000463905 PRG4Q92954 1404 aaPredicted RBP19.38■□□□□ 0.69
ARHGAP4-216ENST00000463905 DIP2BQ9P265 1576 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 165.6 ms