RNA–Protein interactions for RNA: ENST00000463531.1

GRIN2A-204, Transcript of glutamate ionotropic receptor NMDA type subunit 2A, humanhuman

TSL 3

Gene GRIN2A, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN2A-204ENST00000463531 NISCHQ9Y2I1 1504 aa21.13■□□□□ 0.97
GRIN2A-204ENST00000463531 ABCC9O60706 1549 aa19.48■□□□□ 0.71
GRIN2A-204ENST00000463531 CCDC180Q9P1Z9 1646 aa19.15■□□□□ 0.66
GRIN2A-204ENST00000463531 DNAJC5BQ9UF47 199 aa18.59■□□□□ 0.57
GRIN2A-204ENST00000463531 RB1CC1Q8TDY2 1594 aa18.38■□□□□ 0.53
GRIN2A-204ENST00000463531 NACADO15069 1562 aa18.16■□□□□ 0.5
GRIN2A-204ENST00000463531 PABPN1Q86U42 306 aaKnown RBP eCLIP18.06■□□□□ 0.48
GRIN2A-204ENST00000463531 UNC13AQ9UPW8 1703 aa18.05■□□□□ 0.48
GRIN2A-204ENST00000463531 DCAF8L2P0C7V8 631 aa17.96■□□□□ 0.47
GRIN2A-204ENST00000463531 BICRAQ9NZM4 1560 aa17.88■□□□□ 0.45
GRIN2A-204ENST00000463531 MYO15BQ96JP2 1530 aa17.77■□□□□ 0.44
GRIN2A-204ENST00000463531 CC2D2AQ9P2K1 1620 aa17.61■□□□□ 0.41
GRIN2A-204ENST00000463531 CECR2Q9BXF3 1484 aa17.58■□□□□ 0.41
GRIN2A-204ENST00000463531 SHROOM4Q9ULL8 1493 aa17.56■□□□□ 0.4
GRIN2A-204ENST00000463531 EIF4G1Q04637 1599 aaKnown RBP17.47■□□□□ 0.39
GRIN2A-204ENST00000463531 ZCCHC6Q5VYS8 1495 aaKnown RBP17.44■□□□□ 0.38
GRIN2A-204ENST00000463531 SCRIBQ14160 1630 aa17.43■□□□□ 0.38
GRIN2A-204ENST00000463531 DCAF1Q9Y4B6 1507 aa17.42■□□□□ 0.38
GRIN2A-204ENST00000463531 DNAJC5Q9H3Z4 198 aa17.32■□□□□ 0.36
GRIN2A-204ENST00000463531 CUX2O14529 1486 aa16.93■□□□□ 0.3
GRIN2A-204ENST00000463531 AEBP2Q6ZN18 517 aaPredicted RBP16.88■□□□□ 0.29
GRIN2A-204ENST00000463531 ERCC6Q03468 1493 aa16.84■□□□□ 0.29
GRIN2A-204ENST00000463531 NCAPD3P42695 1498 aa16.75■□□□□ 0.27
GRIN2A-204ENST00000463531 ATAD2BQ9ULI0 1458 aa16.67■□□□□ 0.26
GRIN2A-204ENST00000463531 NESP48681 1621 aa16.64■□□□□ 0.25
GRIN2A-204ENST00000463531 HMGXB3Q12766 1538 aa16.62■□□□□ 0.25
GRIN2A-204ENST00000463531 SMARCA2P51531 1590 aa16.6■□□□□ 0.25
GRIN2A-204ENST00000463531 SMARCA4P51532 1647 aa16.58■□□□□ 0.24
GRIN2A-204ENST00000463531 THOC2Q8NI27 1593 aaKnown RBP16.57■□□□□ 0.24
GRIN2A-204ENST00000463531 BAZ1BQ9UIG0 1483 aaKnown RBP16.48■□□□□ 0.23
GRIN2A-204ENST00000463531 KIF21AQ7Z4S6 1674 aa16.46■□□□□ 0.23
GRIN2A-204ENST00000463531 LAMC3Q9Y6N6 1575 aa16.46■□□□□ 0.23
GRIN2A-204ENST00000463531 BAZ1AQ9NRL2 1556 aaPredicted RBP16.43■□□□□ 0.22
GRIN2A-204ENST00000463531 TRIM41Q8WV44 630 aa16.42■□□□□ 0.22
GRIN2A-204ENST00000463531 PEG3Q9GZU2 1588 aa16.41■□□□□ 0.22
GRIN2A-204ENST00000463531 PDS5BQ9NTI5 1447 aa16.35■□□□□ 0.21
GRIN2A-204ENST00000463531 CHIC1Q5VXU3 224 aa16.28■□□□□ 0.2
GRIN2A-204ENST00000463531 MROH2BQ7Z745 1585 aa16.28■□□□□ 0.2
GRIN2A-204ENST00000463531 MRC2Q9UBG0 1479 aa16.25■□□□□ 0.19
GRIN2A-204ENST00000463531 WDR62O43379 1518 aa16.24■□□□□ 0.19
GRIN2A-204ENST00000463531 CADPSQ9ULU8 1353 aa16.22■□□□□ 0.19
GRIN2A-204ENST00000463531 CEP164Q9UPV0 1460 aa16.11■□□□□ 0.17
GRIN2A-204ENST00000463531 WIZO95785 1651 aa16.1■□□□□ 0.17
GRIN2A-204ENST00000463531 OSCARQ8IYS5 282 aa16.07■□□□□ 0.16
GRIN2A-204ENST00000463531 FANCD2Q9BXW9 1451 aa16.06■□□□□ 0.16
GRIN2A-204ENST00000463531 CFTRP13569 1480 aa15.97■□□□□ 0.15
GRIN2A-204ENST00000463531 RIMBP3CA6NJZ7 1639 aa15.97■□□□□ 0.15
GRIN2A-204ENST00000463531 RIMBP3BA6NNM3 1639 aa15.97■□□□□ 0.15
GRIN2A-204ENST00000463531 RIMBP3Q9UFD9 1639 aa15.97■□□□□ 0.15
GRIN2A-204ENST00000463531 URB2Q14146 1524 aaKnown RBP15.96■□□□□ 0.15
GRIN2A-204ENST00000463531 PRDM2Q13029 1718 aa15.87■□□□□ 0.13
GRIN2A-204ENST00000463531 ARHGEF11O15085 1522 aa15.85■□□□□ 0.13
GRIN2A-204ENST00000463531 TOP2AP11388 1531 aaKnown RBP15.84■□□□□ 0.13
GRIN2A-204ENST00000463531 ZNF608Q9ULD9 1512 aaPredicted RBP15.83■□□□□ 0.12
GRIN2A-204ENST00000463531 IFT140Q96RY7 1462 aa15.79■□□□□ 0.12
GRIN2A-204ENST00000463531 RSF1Q96T23 1441 aaPredicted RBP15.79■□□□□ 0.12
GRIN2A-204ENST00000463531 EIF4G3O43432 1585 aaKnown RBP15.75■□□□□ 0.11
GRIN2A-204ENST00000463531 CYB5RLQ6IPT4 315 aa15.73■□□□□ 0.11
GRIN2A-204ENST00000463531 CHD1O14646 1710 aa15.73■□□□□ 0.11
GRIN2A-204ENST00000463531 TOPBP1Q92547 1522 aa15.72■□□□□ 0.11
GRIN2A-204ENST00000463531 ARAP1Q96P48 1450 aa15.68■□□□□ 0.1
GRIN2A-204ENST00000463531 TRHP20396 242 aaPredicted RBP15.67■□□□□ 0.1
GRIN2A-204ENST00000463531 CCDC88BA6NC98 1476 aa15.65■□□□□ 0.1
GRIN2A-204ENST00000463531 DNMBPQ6XZF7 1577 aa15.64■□□□□ 0.09
GRIN2A-204ENST00000463531 ABCC8Q09428 1581 aa15.63■□□□□ 0.09
GRIN2A-204ENST00000463531 TARBP1Q13395 1621 aaKnown RBP15.63■□□□□ 0.09
GRIN2A-204ENST00000463531 AQRO60306 1485 aaKnown RBP eCLIP15.63■□□□□ 0.09
GRIN2A-204ENST00000463531 FBLN2P98095 1184 aa15.57■□□□□ 0.08
GRIN2A-204ENST00000463531 POLA1P09884 1462 aaPredicted RBP15.53■□□□□ 0.08
GRIN2A-204ENST00000463531 CLASP1Q7Z460 1538 aa15.49■□□□□ 0.07
GRIN2A-204ENST00000463531 RAD54L2Q9Y4B4 1467 aa15.48■□□□□ 0.07
GRIN2A-204ENST00000463531 SNAPC4Q5SXM2 1469 aa15.46■□□□□ 0.07
GRIN2A-204ENST00000463531 TDRD9Q8NDG6 1382 aaKnown RBP15.46■□□□□ 0.07
GRIN2A-204ENST00000463531 SYNJ1O43426 1573 aa15.44■□□□□ 0.06
GRIN2A-204ENST00000463531 SOGA1O94964 1423 aa15.43■□□□□ 0.06
GRIN2A-204ENST00000463531 WDR97A6NE52 1622 aa15.43■□□□□ 0.06
GRIN2A-204ENST00000463531 MAGI1Q96QZ7 1491 aaPredicted RBP15.4■□□□□ 0.06
GRIN2A-204ENST00000463531 CHMP7Q8WUX9 453 aaPredicted RBP15.39■□□□□ 0.05
GRIN2A-204ENST00000463531 FGD5Q6ZNL6 1462 aa15.39■□□□□ 0.05
GRIN2A-204ENST00000463531 SYNJ2O15056 1496 aa15.35■□□□□ 0.05
GRIN2A-204ENST00000463531 GRIN2BQ13224 1484 aa15.35■□□□□ 0.05
GRIN2A-204ENST00000463531 GAPVD1Q14C86 1478 aa15.33■□□□□ 0.05
GRIN2A-204ENST00000463531 PBRM1Q86U86 1689 aa15.33■□□□□ 0.04
GRIN2A-204ENST00000463531 CUX1P39880 1505 aa15.33■□□□□ 0.04
GRIN2A-204ENST00000463531 ERCC6L2Q5T890 1561 aa15.24■□□□□ 0.03
GRIN2A-204ENST00000463531 ABCA5Q8WWZ7 1642 aa15.23■□□□□ 0.03
GRIN2A-204ENST00000463531 ABCA10Q8WWZ4 1543 aa15.18■□□□□ 0.02
GRIN2A-204ENST00000463531 KIF13AQ9H1H9 1805 aa15.17■□□□□ 0.02
GRIN2A-204ENST00000463531 CEP170Q5SW79 1584 aa15.17■□□□□ 0.02
GRIN2A-204ENST00000463531 GRIN2AQ12879 1464 aa15.16■□□□□ 0.02
GRIN2A-204ENST00000463531 ADAMTS12P58397 1594 aa15.14■□□□□ 0.01
GRIN2A-204ENST00000463531 SHROOM2Q13796 1616 aa15.13■□□□□ 0.01
GRIN2A-204ENST00000463531 NUP160Q12769 1436 aa15.12■□□□□ 0.01
GRIN2A-204ENST00000463531 FHAD1B1AJZ9 1412 aa15.03■□□□□ -0
GRIN2A-204ENST00000463531 WRNQ14191 1432 aaPredicted RBP eCLIP15.03■□□□□ -0
GRIN2A-204ENST00000463531 BIVM-ERCC5R4GMW8 1640 aa15□□□□□ -0.01
GRIN2A-204ENST00000463531 PRG4Q92954 1404 aaPredicted RBP15□□□□□ -0.01
GRIN2A-204ENST00000463531 ERICH3Q5RHP9 1530 aa14.99□□□□□ -0.01
GRIN2A-204ENST00000463531 ABCC10Q5T3U5 1492 aa14.98□□□□□ -0.01
GRIN2A-204ENST00000463531 TOP2BQ02880 1626 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 124.2 ms