RNA–Protein interactions for RNA: ENST00000463461.5

VTCN1-205, Transcript of V-set domain containing T cell activation inhibitor 1, humanhuman

TSL 3

Gene VTCN1, Length 768 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTCN1-205ENST00000463461 NISCHQ9Y2I1 1504 aa17.37■□□□□ 0.37
VTCN1-205ENST00000463461 ABCC9O60706 1549 aa16.24■□□□□ 0.19
VTCN1-205ENST00000463461 CCDC180Q9P1Z9 1646 aa15.83■□□□□ 0.12
VTCN1-205ENST00000463461 DNAJC5BQ9UF47 199 aa15.63■□□□□ 0.09
VTCN1-205ENST00000463461 RB1CC1Q8TDY2 1594 aa15.28■□□□□ 0.04
VTCN1-205ENST00000463461 NACADO15069 1562 aa15.06■□□□□ 0
VTCN1-205ENST00000463461 PABPN1Q86U42 306 aaKnown RBP eCLIP15.05■□□□□ -0
VTCN1-205ENST00000463461 UNC13AQ9UPW8 1703 aa14.97□□□□□ -0.01
VTCN1-205ENST00000463461 DCAF8L2P0C7V8 631 aa14.9□□□□□ -0.02
VTCN1-205ENST00000463461 BICRAQ9NZM4 1560 aa14.82□□□□□ -0.04
VTCN1-205ENST00000463461 DNAJC5Q9H3Z4 198 aa14.73□□□□□ -0.05
VTCN1-205ENST00000463461 CECR2Q9BXF3 1484 aa14.69□□□□□ -0.06
VTCN1-205ENST00000463461 MYO15BQ96JP2 1530 aa14.68□□□□□ -0.06
VTCN1-205ENST00000463461 CC2D2AQ9P2K1 1620 aa14.66□□□□□ -0.06
VTCN1-205ENST00000463461 SHROOM4Q9ULL8 1493 aa14.59□□□□□ -0.07
VTCN1-205ENST00000463461 EIF4G1Q04637 1599 aaKnown RBP14.51□□□□□ -0.09
VTCN1-205ENST00000463461 SCRIBQ14160 1630 aa14.36□□□□□ -0.11
VTCN1-205ENST00000463461 DCAF1Q9Y4B6 1507 aa14.32□□□□□ -0.12
VTCN1-205ENST00000463461 ZCCHC6Q5VYS8 1495 aaKnown RBP14.27□□□□□ -0.12
VTCN1-205ENST00000463461 CUX2O14529 1486 aa14.21□□□□□ -0.13
VTCN1-205ENST00000463461 ERCC6Q03468 1493 aa14.09□□□□□ -0.15
VTCN1-205ENST00000463461 TRIM41Q8WV44 630 aa13.91□□□□□ -0.18
VTCN1-205ENST00000463461 NCAPD3P42695 1498 aa13.89□□□□□ -0.19
VTCN1-205ENST00000463461 NESP48681 1621 aa13.81□□□□□ -0.2
VTCN1-205ENST00000463461 THOC2Q8NI27 1593 aaKnown RBP13.78□□□□□ -0.2
VTCN1-205ENST00000463461 ATAD2BQ9ULI0 1458 aa13.77□□□□□ -0.21
VTCN1-205ENST00000463461 HMGXB3Q12766 1538 aa13.75□□□□□ -0.21
VTCN1-205ENST00000463461 SMARCA2P51531 1590 aa13.74□□□□□ -0.21
VTCN1-205ENST00000463461 LAMC3Q9Y6N6 1575 aa13.67□□□□□ -0.22
VTCN1-205ENST00000463461 KIF21AQ7Z4S6 1674 aa13.67□□□□□ -0.22
VTCN1-205ENST00000463461 SMARCA4P51532 1647 aa13.66□□□□□ -0.22
VTCN1-205ENST00000463461 BAZ1BQ9UIG0 1483 aaKnown RBP13.63□□□□□ -0.23
VTCN1-205ENST00000463461 PDS5BQ9NTI5 1447 aa13.61□□□□□ -0.23
VTCN1-205ENST00000463461 BAZ1AQ9NRL2 1556 aaPredicted RBP13.54□□□□□ -0.24
VTCN1-205ENST00000463461 PEG3Q9GZU2 1588 aa13.52□□□□□ -0.25
VTCN1-205ENST00000463461 MRC2Q9UBG0 1479 aa13.51□□□□□ -0.25
VTCN1-205ENST00000463461 OSCARQ8IYS5 282 aa13.5□□□□□ -0.25
VTCN1-205ENST00000463461 WDR62O43379 1518 aa13.48□□□□□ -0.25
VTCN1-205ENST00000463461 CADPSQ9ULU8 1353 aa13.45□□□□□ -0.26
VTCN1-205ENST00000463461 CEP164Q9UPV0 1460 aa13.36□□□□□ -0.27
VTCN1-205ENST00000463461 RIMBP3CA6NJZ7 1639 aa13.36□□□□□ -0.27
VTCN1-205ENST00000463461 RIMBP3BA6NNM3 1639 aa13.36□□□□□ -0.27
VTCN1-205ENST00000463461 RIMBP3Q9UFD9 1639 aa13.36□□□□□ -0.27
VTCN1-205ENST00000463461 MROH2BQ7Z745 1585 aa13.36□□□□□ -0.27
VTCN1-205ENST00000463461 FANCD2Q9BXW9 1451 aa13.29□□□□□ -0.28
VTCN1-205ENST00000463461 ARHGEF11O15085 1522 aa13.26□□□□□ -0.29
VTCN1-205ENST00000463461 TRHP20396 242 aaPredicted RBP13.23□□□□□ -0.29
VTCN1-205ENST00000463461 AEBP2Q6ZN18 517 aaPredicted RBP13.22□□□□□ -0.29
VTCN1-205ENST00000463461 CYB5RLQ6IPT4 315 aa13.21□□□□□ -0.29
VTCN1-205ENST00000463461 URB2Q14146 1524 aaKnown RBP13.2□□□□□ -0.3
VTCN1-205ENST00000463461 WIZO95785 1651 aa13.2□□□□□ -0.3
VTCN1-205ENST00000463461 CFTRP13569 1480 aa13.18□□□□□ -0.3
VTCN1-205ENST00000463461 IFT140Q96RY7 1462 aa13.11□□□□□ -0.31
VTCN1-205ENST00000463461 ZNF608Q9ULD9 1512 aaPredicted RBP13.11□□□□□ -0.31
VTCN1-205ENST00000463461 PRDM2Q13029 1718 aa13.1□□□□□ -0.31
VTCN1-205ENST00000463461 ARAP1Q96P48 1450 aa13.08□□□□□ -0.32
VTCN1-205ENST00000463461 CHD1O14646 1710 aa13.07□□□□□ -0.32
VTCN1-205ENST00000463461 EIF4G3O43432 1585 aaKnown RBP13.04□□□□□ -0.32
VTCN1-205ENST00000463461 RSF1Q96T23 1441 aaPredicted RBP13.03□□□□□ -0.32
VTCN1-205ENST00000463461 TOP2AP11388 1531 aaKnown RBP12.99□□□□□ -0.33
VTCN1-205ENST00000463461 TOPBP1Q92547 1522 aa12.99□□□□□ -0.33
VTCN1-205ENST00000463461 FBLN2P98095 1184 aa12.99□□□□□ -0.33
VTCN1-205ENST00000463461 ABCC8Q09428 1581 aa12.96□□□□□ -0.33
VTCN1-205ENST00000463461 AQRO60306 1485 aaKnown RBP eCLIP12.95□□□□□ -0.34
VTCN1-205ENST00000463461 TARBP1Q13395 1621 aaKnown RBP12.92□□□□□ -0.34
VTCN1-205ENST00000463461 DNMBPQ6XZF7 1577 aa12.91□□□□□ -0.34
VTCN1-205ENST00000463461 CLASP1Q7Z460 1538 aa12.86□□□□□ -0.35
VTCN1-205ENST00000463461 CCDC88BA6NC98 1476 aa12.85□□□□□ -0.35
VTCN1-205ENST00000463461 SYNJ1O43426 1573 aa12.84□□□□□ -0.35
VTCN1-205ENST00000463461 CHMP7Q8WUX9 453 aaPredicted RBP12.82□□□□□ -0.36
VTCN1-205ENST00000463461 POLA1P09884 1462 aaPredicted RBP12.82□□□□□ -0.36
VTCN1-205ENST00000463461 SNAPC4Q5SXM2 1469 aa12.79□□□□□ -0.36
VTCN1-205ENST00000463461 TDRD9Q8NDG6 1382 aaKnown RBP12.79□□□□□ -0.36
VTCN1-205ENST00000463461 GAPVD1Q14C86 1478 aa12.78□□□□□ -0.36
VTCN1-205ENST00000463461 RAD54L2Q9Y4B4 1467 aa12.78□□□□□ -0.36
VTCN1-205ENST00000463461 WDR97A6NE52 1622 aa12.77□□□□□ -0.36
VTCN1-205ENST00000463461 SOGA1O94964 1423 aa12.77□□□□□ -0.37
VTCN1-205ENST00000463461 MAGI1Q96QZ7 1491 aaPredicted RBP12.76□□□□□ -0.37
VTCN1-205ENST00000463461 SYNJ2O15056 1496 aa12.72□□□□□ -0.37
VTCN1-205ENST00000463461 GRIN2BQ13224 1484 aa12.72□□□□□ -0.37
VTCN1-205ENST00000463461 FGD5Q6ZNL6 1462 aa12.68□□□□□ -0.38
VTCN1-205ENST00000463461 ILDR1Q86SU0 546 aaPredicted RBP12.67□□□□□ -0.38
VTCN1-205ENST00000463461 KIF13AQ9H1H9 1805 aa12.67□□□□□ -0.38
VTCN1-205ENST00000463461 PBRM1Q86U86 1689 aa12.66□□□□□ -0.38
VTCN1-205ENST00000463461 ERCC6L2Q5T890 1561 aa12.61□□□□□ -0.39
VTCN1-205ENST00000463461 CUX1P39880 1505 aa12.58□□□□□ -0.4
VTCN1-205ENST00000463461 CEP170Q5SW79 1584 aa12.57□□□□□ -0.4
VTCN1-205ENST00000463461 GRIN2AQ12879 1464 aa12.54□□□□□ -0.4
VTCN1-205ENST00000463461 KDM4FA0A1W2PPD8 638 aa12.54□□□□□ -0.4
VTCN1-205ENST00000463461 ABCA5Q8WWZ7 1642 aa12.54□□□□□ -0.4
VTCN1-205ENST00000463461 SHROOM2Q13796 1616 aa12.52□□□□□ -0.4
VTCN1-205ENST00000463461 FAM69CQ0P6D2 419 aa12.51□□□□□ -0.41
VTCN1-205ENST00000463461 NUP160Q12769 1436 aa12.51□□□□□ -0.41
VTCN1-205ENST00000463461 ABCA10Q8WWZ4 1543 aa12.51□□□□□ -0.41
VTCN1-205ENST00000463461 ABCC10Q5T3U5 1492 aa12.49□□□□□ -0.41
VTCN1-205ENST00000463461 KDM6BO15054 1643 aa12.48□□□□□ -0.41
VTCN1-205ENST00000463461 ADAMTS12P58397 1594 aa12.47□□□□□ -0.41
VTCN1-205ENST00000463461 NPM1P06748 294 aaKnown RBP eCLIP12.47□□□□□ -0.41
VTCN1-205ENST00000463461 TSPOAP1O95153 1857 aa12.46□□□□□ -0.42
VTCN1-205ENST00000463461 DIP2BQ9P265 1576 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms