RNA–Protein interactions for RNA: ENST00000463142.1

MKRN1-203, Transcript of makorin ring finger protein 1, humanhuman

TSL 4

Gene MKRN1, Length 460 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKRN1-203ENST00000463142 NISCHQ9Y2I1 1504 aa20.74■□□□□ 0.91
MKRN1-203ENST00000463142 ABCC9O60706 1549 aa18.9■□□□□ 0.62
MKRN1-203ENST00000463142 CCDC180Q9P1Z9 1646 aa18.78■□□□□ 0.6
MKRN1-203ENST00000463142 RB1CC1Q8TDY2 1594 aa18■□□□□ 0.47
MKRN1-203ENST00000463142 DNAJC5BQ9UF47 199 aa17.88■□□□□ 0.45
MKRN1-203ENST00000463142 NACADO15069 1562 aa17.83■□□□□ 0.44
MKRN1-203ENST00000463142 MYO15BQ96JP2 1530 aa17.56■□□□□ 0.4
MKRN1-203ENST00000463142 DCAF8L2P0C7V8 631 aa17.51■□□□□ 0.39
MKRN1-203ENST00000463142 PABPN1Q86U42 306 aaKnown RBP eCLIP17.51■□□□□ 0.39
MKRN1-203ENST00000463142 UNC13AQ9UPW8 1703 aa17.46■□□□□ 0.39
MKRN1-203ENST00000463142 BICRAQ9NZM4 1560 aa17.38■□□□□ 0.37
MKRN1-203ENST00000463142 SHROOM4Q9ULL8 1493 aa17.34■□□□□ 0.37
MKRN1-203ENST00000463142 DCAF1Q9Y4B6 1507 aa17.21■□□□□ 0.34
MKRN1-203ENST00000463142 ZCCHC6Q5VYS8 1495 aaKnown RBP17.14■□□□□ 0.33
MKRN1-203ENST00000463142 CECR2Q9BXF3 1484 aa17.11■□□□□ 0.33
MKRN1-203ENST00000463142 CC2D2AQ9P2K1 1620 aa17.09■□□□□ 0.33
MKRN1-203ENST00000463142 EIF4G1Q04637 1599 aaKnown RBP17.02■□□□□ 0.32
MKRN1-203ENST00000463142 SCRIBQ14160 1630 aa16.98■□□□□ 0.31
MKRN1-203ENST00000463142 DNAJC5Q9H3Z4 198 aa16.73■□□□□ 0.27
MKRN1-203ENST00000463142 CUX2O14529 1486 aa16.53■□□□□ 0.24
MKRN1-203ENST00000463142 NCAPD3P42695 1498 aa16.44■□□□□ 0.22
MKRN1-203ENST00000463142 ERCC6Q03468 1493 aa16.42■□□□□ 0.22
MKRN1-203ENST00000463142 SMARCA2P51531 1590 aa16.32■□□□□ 0.2
MKRN1-203ENST00000463142 HMGXB3Q12766 1538 aa16.31■□□□□ 0.2
MKRN1-203ENST00000463142 ATAD2BQ9ULI0 1458 aa16.31■□□□□ 0.2
MKRN1-203ENST00000463142 SMARCA4P51532 1647 aa16.23■□□□□ 0.19
MKRN1-203ENST00000463142 BAZ1AQ9NRL2 1556 aaPredicted RBP16.16■□□□□ 0.18
MKRN1-203ENST00000463142 BAZ1BQ9UIG0 1483 aaKnown RBP16.16■□□□□ 0.18
MKRN1-203ENST00000463142 NESP48681 1621 aa16.13■□□□□ 0.17
MKRN1-203ENST00000463142 PEG3Q9GZU2 1588 aa16.13■□□□□ 0.17
MKRN1-203ENST00000463142 LAMC3Q9Y6N6 1575 aa16.13■□□□□ 0.17
MKRN1-203ENST00000463142 THOC2Q8NI27 1593 aaKnown RBP16.09■□□□□ 0.17
MKRN1-203ENST00000463142 PDS5BQ9NTI5 1447 aa16.05■□□□□ 0.16
MKRN1-203ENST00000463142 KIF21AQ7Z4S6 1674 aa15.95■□□□□ 0.14
MKRN1-203ENST00000463142 MROH2BQ7Z745 1585 aa15.92■□□□□ 0.14
MKRN1-203ENST00000463142 CADPSQ9ULU8 1353 aa15.91■□□□□ 0.14
MKRN1-203ENST00000463142 MRC2Q9UBG0 1479 aa15.89■□□□□ 0.13
MKRN1-203ENST00000463142 WDR62O43379 1518 aa15.86■□□□□ 0.13
MKRN1-203ENST00000463142 TRIM41Q8WV44 630 aa15.82■□□□□ 0.12
MKRN1-203ENST00000463142 CEP164Q9UPV0 1460 aa15.78■□□□□ 0.12
MKRN1-203ENST00000463142 FANCD2Q9BXW9 1451 aa15.71■□□□□ 0.1
MKRN1-203ENST00000463142 OSCARQ8IYS5 282 aa15.69■□□□□ 0.1
MKRN1-203ENST00000463142 WIZO95785 1651 aa15.69■□□□□ 0.1
MKRN1-203ENST00000463142 CFTRP13569 1480 aa15.68■□□□□ 0.1
MKRN1-203ENST00000463142 RSF1Q96T23 1441 aaPredicted RBP15.61■□□□□ 0.09
MKRN1-203ENST00000463142 TOP2AP11388 1531 aaKnown RBP15.57■□□□□ 0.08
MKRN1-203ENST00000463142 URB2Q14146 1524 aaKnown RBP15.56■□□□□ 0.08
MKRN1-203ENST00000463142 PRDM2Q13029 1718 aa15.49■□□□□ 0.07
MKRN1-203ENST00000463142 IFT140Q96RY7 1462 aa15.49■□□□□ 0.07
MKRN1-203ENST00000463142 SUPT5HO00267 1087 aaKnown RBP15.49■□□□□ 0.07
MKRN1-203ENST00000463142 RIMBP3CA6NJZ7 1639 aa15.45■□□□□ 0.06
MKRN1-203ENST00000463142 RIMBP3BA6NNM3 1639 aa15.45■□□□□ 0.06
MKRN1-203ENST00000463142 RIMBP3Q9UFD9 1639 aa15.45■□□□□ 0.06
MKRN1-203ENST00000463142 ABCC8Q09428 1581 aa15.43■□□□□ 0.06
MKRN1-203ENST00000463142 ARHGEF11O15085 1522 aa15.41■□□□□ 0.06
MKRN1-203ENST00000463142 TOPBP1Q92547 1522 aa15.38■□□□□ 0.05
MKRN1-203ENST00000463142 ZNF608Q9ULD9 1512 aaPredicted RBP15.38■□□□□ 0.05
MKRN1-203ENST00000463142 CCDC88BA6NC98 1476 aa15.34■□□□□ 0.05
MKRN1-203ENST00000463142 EIF4G3O43432 1585 aaKnown RBP15.33■□□□□ 0.05
MKRN1-203ENST00000463142 DNMBPQ6XZF7 1577 aa15.32■□□□□ 0.04
MKRN1-203ENST00000463142 CYB5RLQ6IPT4 315 aa15.27■□□□□ 0.04
MKRN1-203ENST00000463142 TARBP1Q13395 1621 aaKnown RBP15.25■□□□□ 0.03
MKRN1-203ENST00000463142 CHD1O14646 1710 aa15.23■□□□□ 0.03
MKRN1-203ENST00000463142 AQRO60306 1485 aaKnown RBP eCLIP15.22■□□□□ 0.035e-7■■■■□ 23.8
MKRN1-203ENST00000463142 WDR97A6NE52 1622 aa15.21■□□□□ 0.03
MKRN1-203ENST00000463142 ARAP1Q96P48 1450 aa15.21■□□□□ 0.03
MKRN1-203ENST00000463142 TRHP20396 242 aaPredicted RBP15.2■□□□□ 0.02
MKRN1-203ENST00000463142 POLA1P09884 1462 aaPredicted RBP15.2■□□□□ 0.02
MKRN1-203ENST00000463142 FBLN2P98095 1184 aa15.18■□□□□ 0.02
MKRN1-203ENST00000463142 SOGA1O94964 1423 aa15.13■□□□□ 0.01
MKRN1-203ENST00000463142 MAGI1Q96QZ7 1491 aaPredicted RBP15.12■□□□□ 0.01
MKRN1-203ENST00000463142 SYNJ1O43426 1573 aa15.11■□□□□ 0.01
MKRN1-203ENST00000463142 CLASP1Q7Z460 1538 aa15.1■□□□□ 0.01
MKRN1-203ENST00000463142 SNAPC4Q5SXM2 1469 aa15.09■□□□□ 0.01
MKRN1-203ENST00000463142 TDRD9Q8NDG6 1382 aaKnown RBP15.09■□□□□ 0.01
MKRN1-203ENST00000463142 RAD54L2Q9Y4B4 1467 aa15.08■□□□□ 0.01
MKRN1-203ENST00000463142 CHMP7Q8WUX9 453 aaPredicted RBP15.08■□□□□ 0
MKRN1-203ENST00000463142 GRIN2BQ13224 1484 aa15.07■□□□□ 0
MKRN1-203ENST00000463142 FGD5Q6ZNL6 1462 aa15.06■□□□□ 0
MKRN1-203ENST00000463142 SYNJ2O15056 1496 aa15.05■□□□□ -0
MKRN1-203ENST00000463142 AEBP2Q6ZN18 517 aaPredicted RBP14.99□□□□□ -0.01
MKRN1-203ENST00000463142 CUX1P39880 1505 aa14.98□□□□□ -0.01
MKRN1-203ENST00000463142 GAPVD1Q14C86 1478 aa14.96□□□□□ -0.01
MKRN1-203ENST00000463142 PBRM1Q86U86 1689 aa14.93□□□□□ -0.02
MKRN1-203ENST00000463142 ABCA10Q8WWZ4 1543 aa14.92□□□□□ -0.02
MKRN1-203ENST00000463142 ABCA5Q8WWZ7 1642 aa14.89□□□□□ -0.03
MKRN1-203ENST00000463142 GRIN2AQ12879 1464 aa14.85□□□□□ -0.03
MKRN1-203ENST00000463142 NUP160Q12769 1436 aa14.83□□□□□ -0.04
MKRN1-203ENST00000463142 WRNQ14191 1432 aaPredicted RBP eCLIP14.83□□□□□ -0.04
MKRN1-203ENST00000463142 ADAMTS12P58397 1594 aa14.8□□□□□ -0.04
MKRN1-203ENST00000463142 CEP170Q5SW79 1584 aa14.79□□□□□ -0.04
MKRN1-203ENST00000463142 FHAD1B1AJZ9 1412 aa14.78□□□□□ -0.04
MKRN1-203ENST00000463142 SHROOM2Q13796 1616 aa14.77□□□□□ -0.04
MKRN1-203ENST00000463142 CHIC1Q5VXU3 224 aa14.77□□□□□ -0.05
MKRN1-203ENST00000463142 ERICH3Q5RHP9 1530 aa14.75□□□□□ -0.05
MKRN1-203ENST00000463142 ERCC6L2Q5T890 1561 aa14.74□□□□□ -0.05
MKRN1-203ENST00000463142 TOP2BQ02880 1626 aa14.73□□□□□ -0.05
MKRN1-203ENST00000463142 BIVM-ERCC5R4GMW8 1640 aa14.72□□□□□ -0.05
MKRN1-203ENST00000463142 PRG4Q92954 1404 aaPredicted RBP14.67□□□□□ -0.06
MKRN1-203ENST00000463142 KIF13AQ9H1H9 1805 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms