RNA–Protein interactions for RNA: ENST00000463133.1

POLDIP3-207, Transcript of DNA polymerase delta interacting protein 3, humanhuman

TSL 4

Gene POLDIP3, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLDIP3-207ENST00000463133 NISCHQ9Y2I1 1504 aa32.6■■■□□ 2.81
POLDIP3-207ENST00000463133 ABCC9O60706 1549 aa30.66■■■□□ 2.5
POLDIP3-207ENST00000463133 DNAJC5BQ9UF47 199 aa29.67■■■□□ 2.34
POLDIP3-207ENST00000463133 CCDC180Q9P1Z9 1646 aa29.65■■■□□ 2.34
POLDIP3-207ENST00000463133 RB1CC1Q8TDY2 1594 aa28.76■■■□□ 2.19
POLDIP3-207ENST00000463133 PABPN1Q86U42 306 aaKnown RBP eCLIP28.41■■■□□ 2.14
POLDIP3-207ENST00000463133 NACADO15069 1562 aa28.33■■■□□ 2.13
POLDIP3-207ENST00000463133 DNAJC5Q9H3Z4 198 aa28.06■■■□□ 2.08
POLDIP3-207ENST00000463133 DCAF8L2P0C7V8 631 aa28■■■□□ 2.07
POLDIP3-207ENST00000463133 UNC13AQ9UPW8 1703 aa27.98■■■□□ 2.07
POLDIP3-207ENST00000463133 BICRAQ9NZM4 1560 aa27.9■■■□□ 2.06
POLDIP3-207ENST00000463133 CECR2Q9BXF3 1484 aa27.76■■■□□ 2.03
POLDIP3-207ENST00000463133 MYO15BQ96JP2 1530 aa27.63■■■□□ 2.01
POLDIP3-207ENST00000463133 CC2D2AQ9P2K1 1620 aa27.63■■■□□ 2.01
POLDIP3-207ENST00000463133 SHROOM4Q9ULL8 1493 aa27.53■■■□□ 2
POLDIP3-207ENST00000463133 EIF4G1Q04637 1599 aaKnown RBP27.34■■□□□ 1.97
POLDIP3-207ENST00000463133 SCRIBQ14160 1630 aa26.94■■□□□ 1.9
POLDIP3-207ENST00000463133 CUX2O14529 1486 aa26.9■■□□□ 1.9
POLDIP3-207ENST00000463133 DCAF1Q9Y4B6 1507 aa26.89■■□□□ 1.89
POLDIP3-207ENST00000463133 ZCCHC6Q5VYS8 1495 aaKnown RBP26.78■■□□□ 1.88
POLDIP3-207ENST00000463133 ERCC6Q03468 1493 aa26.6■■□□□ 1.85
POLDIP3-207ENST00000463133 TRIM41Q8WV44 630 aa26.38■■□□□ 1.81
POLDIP3-207ENST00000463133 NCAPD3P42695 1498 aa26.19■■□□□ 1.78
POLDIP3-207ENST00000463133 NESP48681 1621 aa26.02■■□□□ 1.76
POLDIP3-207ENST00000463133 THOC2Q8NI27 1593 aaKnown RBP25.95■■□□□ 1.75
POLDIP3-207ENST00000463133 ATAD2BQ9ULI0 1458 aa25.94■■□□□ 1.74
POLDIP3-207ENST00000463133 HMGXB3Q12766 1538 aa25.87■■□□□ 1.73
POLDIP3-207ENST00000463133 SMARCA2P51531 1590 aa25.82■■□□□ 1.72
POLDIP3-207ENST00000463133 LAMC3Q9Y6N6 1575 aa25.73■■□□□ 1.71
POLDIP3-207ENST00000463133 PDS5BQ9NTI5 1447 aa25.68■■□□□ 1.7
POLDIP3-207ENST00000463133 BAZ1BQ9UIG0 1483 aaKnown RBP25.64■■□□□ 1.69
POLDIP3-207ENST00000463133 SMARCA4P51532 1647 aa25.61■■□□□ 1.69
POLDIP3-207ENST00000463133 KIF21AQ7Z4S6 1674 aa25.61■■□□□ 1.69
POLDIP3-207ENST00000463133 OSCARQ8IYS5 282 aa25.54■■□□□ 1.68
POLDIP3-207ENST00000463133 BAZ1AQ9NRL2 1556 aaPredicted RBP25.5■■□□□ 1.67
POLDIP3-207ENST00000463133 MRC2Q9UBG0 1479 aa25.46■■□□□ 1.67
POLDIP3-207ENST00000463133 WDR62O43379 1518 aa25.41■■□□□ 1.66
POLDIP3-207ENST00000463133 PEG3Q9GZU2 1588 aa25.4■■□□□ 1.66
POLDIP3-207ENST00000463133 CADPSQ9ULU8 1353 aa25.35■■□□□ 1.65
POLDIP3-207ENST00000463133 RIMBP3CA6NJZ7 1639 aa25.2■■□□□ 1.62
POLDIP3-207ENST00000463133 RIMBP3BA6NNM3 1639 aa25.2■■□□□ 1.62
POLDIP3-207ENST00000463133 RIMBP3Q9UFD9 1639 aa25.2■■□□□ 1.62
POLDIP3-207ENST00000463133 CEP164Q9UPV0 1460 aa25.16■■□□□ 1.62
POLDIP3-207ENST00000463133 AEBP2Q6ZN18 517 aaPredicted RBP25.1■■□□□ 1.61
POLDIP3-207ENST00000463133 MROH2BQ7Z745 1585 aa25.07■■□□□ 1.6
POLDIP3-207ENST00000463133 ARHGEF11O15085 1522 aa25.06■■□□□ 1.6
POLDIP3-207ENST00000463133 TRHP20396 242 aaPredicted RBP25.05■■□□□ 1.6
POLDIP3-207ENST00000463133 FANCD2Q9BXW9 1451 aa25.03■■□□□ 1.6
POLDIP3-207ENST00000463133 CYB5RLQ6IPT4 315 aa24.99■■□□□ 1.59
POLDIP3-207ENST00000463133 URB2Q14146 1524 aaKnown RBP24.86■■□□□ 1.57
POLDIP3-207ENST00000463133 CFTRP13569 1480 aa24.83■■□□□ 1.57
POLDIP3-207ENST00000463133 ARAP1Q96P48 1450 aa24.73■■□□□ 1.55
POLDIP3-207ENST00000463133 ZNF608Q9ULD9 1512 aaPredicted RBP24.71■■□□□ 1.55
POLDIP3-207ENST00000463133 IFT140Q96RY7 1462 aa24.7■■□□□ 1.55
POLDIP3-207ENST00000463133 WIZO95785 1651 aa24.68■■□□□ 1.54
POLDIP3-207ENST00000463133 RSF1Q96T23 1441 aaPredicted RBP24.62■■□□□ 1.53
POLDIP3-207ENST00000463133 EIF4G3O43432 1585 aaKnown RBP24.5■■□□□ 1.51
POLDIP3-207ENST00000463133 CHD1O14646 1710 aa24.48■■□□□ 1.51
POLDIP3-207ENST00000463133 FBLN2P98095 1184 aa24.48■■□□□ 1.51
POLDIP3-207ENST00000463133 TOPBP1Q92547 1522 aa24.43■■□□□ 1.5
POLDIP3-207ENST00000463133 AQRO60306 1485 aaKnown RBP eCLIP24.39■■□□□ 1.51e-7■■■■■ 33
POLDIP3-207ENST00000463133 PRDM2Q13029 1718 aa24.38■■□□□ 1.49
POLDIP3-207ENST00000463133 ABCC8Q09428 1581 aa24.37■■□□□ 1.49
POLDIP3-207ENST00000463133 TOP2AP11388 1531 aaKnown RBP24.35■■□□□ 1.49
POLDIP3-207ENST00000463133 TARBP1Q13395 1621 aaKnown RBP24.26■■□□□ 1.47
POLDIP3-207ENST00000463133 DNMBPQ6XZF7 1577 aa24.25■■□□□ 1.47
POLDIP3-207ENST00000463133 CLASP1Q7Z460 1538 aa24.23■■□□□ 1.47
POLDIP3-207ENST00000463133 SYNJ1O43426 1573 aa24.16■■□□□ 1.46
POLDIP3-207ENST00000463133 CHMP7Q8WUX9 453 aaPredicted RBP24.16■■□□□ 1.46
POLDIP3-207ENST00000463133 POLA1P09884 1462 aaPredicted RBP24.13■■□□□ 1.45
POLDIP3-207ENST00000463133 ILDR1Q86SU0 546 aaPredicted RBP24.11■■□□□ 1.45
POLDIP3-207ENST00000463133 TDRD9Q8NDG6 1382 aaKnown RBP24.1■■□□□ 1.45
POLDIP3-207ENST00000463133 CCDC88BA6NC98 1476 aa24.1■■□□□ 1.45
POLDIP3-207ENST00000463133 GAPVD1Q14C86 1478 aa24.1■■□□□ 1.45
POLDIP3-207ENST00000463133 SNAPC4Q5SXM2 1469 aa24.1■■□□□ 1.45
POLDIP3-207ENST00000463133 MAGI1Q96QZ7 1491 aaPredicted RBP24.04■■□□□ 1.44
POLDIP3-207ENST00000463133 RAD54L2Q9Y4B4 1467 aa24.03■■□□□ 1.44
POLDIP3-207ENST00000463133 SOGA1O94964 1423 aa24.02■■□□□ 1.44
POLDIP3-207ENST00000463133 WDR97A6NE52 1622 aa24■■□□□ 1.43
POLDIP3-207ENST00000463133 SYNJ2O15056 1496 aa23.97■■□□□ 1.43
POLDIP3-207ENST00000463133 GRIN2BQ13224 1484 aa23.94■■□□□ 1.42
POLDIP3-207ENST00000463133 FGD5Q6ZNL6 1462 aa23.81■■□□□ 1.4
POLDIP3-207ENST00000463133 KDM4FA0A1W2PPD8 638 aa23.78■■□□□ 1.4
POLDIP3-207ENST00000463133 KIF13AQ9H1H9 1805 aa23.75■■□□□ 1.39
POLDIP3-207ENST00000463133 ERCC6L2Q5T890 1561 aa23.74■■□□□ 1.39
POLDIP3-207ENST00000463133 PBRM1Q86U86 1689 aa23.66■■□□□ 1.38
POLDIP3-207ENST00000463133 CEP170Q5SW79 1584 aa23.65■■□□□ 1.38
POLDIP3-207ENST00000463133 FAM69CQ0P6D2 419 aa23.64■■□□□ 1.37
POLDIP3-207ENST00000463133 CUX1P39880 1505 aa23.62■■□□□ 1.37
POLDIP3-207ENST00000463133 GRIN2AQ12879 1464 aa23.6■■□□□ 1.37
POLDIP3-207ENST00000463133 ABCC10Q5T3U5 1492 aa23.59■■□□□ 1.37
POLDIP3-207ENST00000463133 NUP160Q12769 1436 aa23.58■■□□□ 1.36
POLDIP3-207ENST00000463133 KDM6BO15054 1643 aa23.53■■□□□ 1.36
POLDIP3-207ENST00000463133 SHROOM2Q13796 1616 aa23.53■■□□□ 1.36
POLDIP3-207ENST00000463133 NPM1P06748 294 aaKnown RBP eCLIP23.53■■□□□ 1.36
POLDIP3-207ENST00000463133 ABCA5Q8WWZ7 1642 aa23.51■■□□□ 1.35
POLDIP3-207ENST00000463133 ABCA10Q8WWZ4 1543 aa23.51■■□□□ 1.35
POLDIP3-207ENST00000463133 MAPKBP1O60336 1514 aa23.46■■□□□ 1.35
POLDIP3-207ENST00000463133 DIP2BQ9P265 1576 aa23.44■■□□□ 1.34
POLDIP3-207ENST00000463133 PRG4Q92954 1404 aaPredicted RBP23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms