RNA–Protein interactions for RNA: ENST00000463109.2

TDRD3-205, Transcript of tudor domain containing 3, humanhuman

TSL 5

Gene TDRD3, Length 723 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDRD3-205ENST00000463109 AEBP2Q6ZN18 517 aaPredicted RBP27.98■■■□□ 2.07
TDRD3-205ENST00000463109 NISCHQ9Y2I1 1504 aa27.67■■■□□ 2.02
TDRD3-205ENST00000463109 CHIC1Q5VXU3 224 aa26.74■■□□□ 1.87
TDRD3-205ENST00000463109 CCDC180Q9P1Z9 1646 aa24.67■■□□□ 1.54
TDRD3-205ENST00000463109 ABCC9O60706 1549 aa24.62■■□□□ 1.53
TDRD3-205ENST00000463109 PHF23Q9BUL5 403 aaPredicted RBP23.61■■□□□ 1.37
TDRD3-205ENST00000463109 SENP3Q9H4L4 574 aaPredicted RBP23.59■■□□□ 1.37
TDRD3-205ENST00000463109 RB1CC1Q8TDY2 1594 aa23.44■■□□□ 1.34
TDRD3-205ENST00000463109 DCAF8L2P0C7V8 631 aa23.4■■□□□ 1.34
TDRD3-205ENST00000463109 NACADO15069 1562 aa23.32■■□□□ 1.32
TDRD3-205ENST00000463109 MYO15BQ96JP2 1530 aa23.03■■□□□ 1.28
TDRD3-205ENST00000463109 PABPN1Q86U42 306 aaKnown RBP eCLIP23.01■■□□□ 1.27
TDRD3-205ENST00000463109 DNAJC5BQ9UF47 199 aa23.01■■□□□ 1.27
TDRD3-205ENST00000463109 ZCCHC6Q5VYS8 1495 aaKnown RBP22.94■■□□□ 1.26
TDRD3-205ENST00000463109 UNC13AQ9UPW8 1703 aa22.88■■□□□ 1.25
TDRD3-205ENST00000463109 DCAF1Q9Y4B6 1507 aa22.82■■□□□ 1.24
TDRD3-205ENST00000463109 BICRAQ9NZM4 1560 aa22.78■■□□□ 1.24
TDRD3-205ENST00000463109 SCRIBQ14160 1630 aa22.56■■□□□ 1.2
TDRD3-205ENST00000463109 SHROOM4Q9ULL8 1493 aa22.41■■□□□ 1.18
TDRD3-205ENST00000463109 CC2D2AQ9P2K1 1620 aa22.2■■□□□ 1.15
TDRD3-205ENST00000463109 EIF4G1Q04637 1599 aaKnown RBP22.2■■□□□ 1.14
TDRD3-205ENST00000463109 CECR2Q9BXF3 1484 aa22.14■■□□□ 1.13
TDRD3-205ENST00000463109 FOXD1Q16676 465 aa22.13■■□□□ 1.13
TDRD3-205ENST00000463109 NCAPD3P42695 1498 aa21.57■■□□□ 1.04
TDRD3-205ENST00000463109 ATAD2BQ9ULI0 1458 aa21.53■■□□□ 1.04
TDRD3-205ENST00000463109 SMARCA4P51532 1647 aa21.51■■□□□ 1.03
TDRD3-205ENST00000463109 SMARCA2P51531 1590 aa21.44■■□□□ 1.02
TDRD3-205ENST00000463109 BAZ1AQ9NRL2 1556 aaPredicted RBP21.44■■□□□ 1.02
TDRD3-205ENST00000463109 PLPPR3Q6T4P5 718 aa21.43■■□□□ 1.02
TDRD3-205ENST00000463109 HMGXB3Q12766 1538 aa21.37■■□□□ 1.01
TDRD3-205ENST00000463109 MROH2BQ7Z745 1585 aa21.34■■□□□ 1.01
TDRD3-205ENST00000463109 BAZ1BQ9UIG0 1483 aaKnown RBP21.32■■□□□ 1
TDRD3-205ENST00000463109 PEG3Q9GZU2 1588 aa21.28■■□□□ 1
TDRD3-205ENST00000463109 ERCC6Q03468 1493 aa21.21■□□□□ 0.99
TDRD3-205ENST00000463109 NESP48681 1621 aa21.2■□□□□ 0.98
TDRD3-205ENST00000463109 CUX2O14529 1486 aa21.08■□□□□ 0.97
TDRD3-205ENST00000463109 WIZO95785 1651 aa21.07■□□□□ 0.96
TDRD3-205ENST00000463109 PPP6R1Q9UPN7 881 aa21.03■□□□□ 0.96
TDRD3-205ENST00000463109 LAMC3Q9Y6N6 1575 aa21.01■□□□□ 0.95
TDRD3-205ENST00000463109 ADRA2BP18089 450 aa20.98■□□□□ 0.95
TDRD3-205ENST00000463109 RSF1Q96T23 1441 aaPredicted RBP20.97■□□□□ 0.95
TDRD3-205ENST00000463109 DNAJC5Q9H3Z4 198 aa20.96■□□□□ 0.95
TDRD3-205ENST00000463109 CADPSQ9ULU8 1353 aa20.94■□□□□ 0.94
TDRD3-205ENST00000463109 PDS5BQ9NTI5 1447 aa20.93■□□□□ 0.94
TDRD3-205ENST00000463109 THOC2Q8NI27 1593 aaKnown RBP20.89■□□□□ 0.93
TDRD3-205ENST00000463109 KIF21AQ7Z4S6 1674 aa20.86■□□□□ 0.93
TDRD3-205ENST00000463109 TOP2AP11388 1531 aaKnown RBP20.79■□□□□ 0.92
TDRD3-205ENST00000463109 CFTRP13569 1480 aa20.72■□□□□ 0.91
TDRD3-205ENST00000463109 MRC2Q9UBG0 1479 aa20.72■□□□□ 0.91
TDRD3-205ENST00000463109 PIAS4Q8N2W9 510 aaPredicted RBP20.7■□□□□ 0.9
TDRD3-205ENST00000463109 FANCD2Q9BXW9 1451 aa20.69■□□□□ 0.9
TDRD3-205ENST00000463109 CEP164Q9UPV0 1460 aa20.68■□□□□ 0.9
TDRD3-205ENST00000463109 WDR62O43379 1518 aa20.64■□□□□ 0.9
TDRD3-205ENST00000463109 CCDC88BA6NC98 1476 aa20.62■□□□□ 0.89
TDRD3-205ENST00000463109 URB2Q14146 1524 aaKnown RBP20.51■□□□□ 0.87
TDRD3-205ENST00000463109 PRDM2Q13029 1718 aa20.42■□□□□ 0.86
TDRD3-205ENST00000463109 MSH5O43196 834 aa20.37■□□□□ 0.85
TDRD3-205ENST00000463109 TOPBP1Q92547 1522 aa20.31■□□□□ 0.84
TDRD3-205ENST00000463109 IFT140Q96RY7 1462 aa20.25■□□□□ 0.83
TDRD3-205ENST00000463109 SUPT5HO00267 1087 aaKnown RBP20.25■□□□□ 0.83
TDRD3-205ENST00000463109 ABCC8Q09428 1581 aa20.25■□□□□ 0.83
TDRD3-205ENST00000463109 ZNF608Q9ULD9 1512 aaPredicted RBP20.24■□□□□ 0.83
TDRD3-205ENST00000463109 OSCARQ8IYS5 282 aa20.23■□□□□ 0.83
TDRD3-205ENST00000463109 DNMBPQ6XZF7 1577 aa20.22■□□□□ 0.83
TDRD3-205ENST00000463109 TRIM41Q8WV44 630 aa20.15■□□□□ 0.82
TDRD3-205ENST00000463109 POLA1P09884 1462 aaPredicted RBP20.11■□□□□ 0.81
TDRD3-205ENST00000463109 AQRO60306 1485 aaKnown RBP eCLIP20.11■□□□□ 0.81
TDRD3-205ENST00000463109 TARBP1Q13395 1621 aaKnown RBP20.09■□□□□ 0.81
TDRD3-205ENST00000463109 RAD54L2Q9Y4B4 1467 aa20.08■□□□□ 0.81
TDRD3-205ENST00000463109 EIF4G3O43432 1585 aaKnown RBP20.08■□□□□ 0.8
TDRD3-205ENST00000463109 SOGA1O94964 1423 aa20.06■□□□□ 0.8
TDRD3-205ENST00000463109 CUX1P39880 1505 aa20.03■□□□□ 0.8
TDRD3-205ENST00000463109 FGD5Q6ZNL6 1462 aa20.02■□□□□ 0.8
TDRD3-205ENST00000463109 TDRD9Q8NDG6 1382 aaKnown RBP20.01■□□□□ 0.79
TDRD3-205ENST00000463109 FBLN2P98095 1184 aa19.97■□□□□ 0.79
TDRD3-205ENST00000463109 CHD1O14646 1710 aa19.89■□□□□ 0.77
TDRD3-205ENST00000463109 RIMBP3CA6NJZ7 1639 aa19.88■□□□□ 0.77
TDRD3-205ENST00000463109 RIMBP3BA6NNM3 1639 aa19.88■□□□□ 0.77
TDRD3-205ENST00000463109 RIMBP3Q9UFD9 1639 aa19.88■□□□□ 0.77
TDRD3-205ENST00000463109 SNAPC4Q5SXM2 1469 aa19.86■□□□□ 0.77
TDRD3-205ENST00000463109 ARHGEF11O15085 1522 aa19.85■□□□□ 0.77
TDRD3-205ENST00000463109 WDR97A6NE52 1622 aa19.84■□□□□ 0.77
TDRD3-205ENST00000463109 CHMP7Q8WUX9 453 aaPredicted RBP19.83■□□□□ 0.77
TDRD3-205ENST00000463109 GRIN2BQ13224 1484 aa19.83■□□□□ 0.76
TDRD3-205ENST00000463109 GAPVD1Q14C86 1478 aa19.79■□□□□ 0.76
TDRD3-205ENST00000463109 ABCA10Q8WWZ4 1543 aa19.79■□□□□ 0.76
TDRD3-205ENST00000463109 MAGI1Q96QZ7 1491 aaPredicted RBP19.79■□□□□ 0.76
TDRD3-205ENST00000463109 CYB5RLQ6IPT4 315 aa19.78■□□□□ 0.76
TDRD3-205ENST00000463109 WRNQ14191 1432 aaPredicted RBP eCLIP19.76■□□□□ 0.75
TDRD3-205ENST00000463109 SYNJ2O15056 1496 aa19.73■□□□□ 0.75
TDRD3-205ENST00000463109 SYNJ1O43426 1573 aa19.73■□□□□ 0.75
TDRD3-205ENST00000463109 TOP2BQ02880 1626 aa19.72■□□□□ 0.75
TDRD3-205ENST00000463109 ABCA5Q8WWZ7 1642 aa19.71■□□□□ 0.75
TDRD3-205ENST00000463109 PBRM1Q86U86 1689 aa19.71■□□□□ 0.75
TDRD3-205ENST00000463109 BIVM-ERCC5R4GMW8 1640 aa19.7■□□□□ 0.74
TDRD3-205ENST00000463109 CLASP1Q7Z460 1538 aa19.69■□□□□ 0.74
TDRD3-205ENST00000463109 ARAP1Q96P48 1450 aa19.68■□□□□ 0.74
TDRD3-205ENST00000463109 GRIN2AQ12879 1464 aa19.57■□□□□ 0.72
TDRD3-205ENST00000463109 ADAMTS12P58397 1594 aa19.56■□□□□ 0.72
TDRD3-205ENST00000463109 FHAD1B1AJZ9 1412 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms