RNA–Protein interactions for RNA: ENST00000463009.1

ARPC1A-203, Transcript of actin related protein 2/3 complex subunit 1A, humanhuman

TSL 3

Gene ARPC1A, Length 719 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1A-203ENST00000463009 NISCHQ9Y2I1 1504 aa26.06■■□□□ 1.76
ARPC1A-203ENST00000463009 CCDC180Q9P1Z9 1646 aa23.1■■□□□ 1.29
ARPC1A-203ENST00000463009 AEBP2Q6ZN18 517 aaPredicted RBP22.97■■□□□ 1.27
ARPC1A-203ENST00000463009 ABCC9O60706 1549 aa22.87■■□□□ 1.25
ARPC1A-203ENST00000463009 CHIC1Q5VXU3 224 aa22.87■■□□□ 1.25
ARPC1A-203ENST00000463009 DNAJC5BQ9UF47 199 aa21.95■■□□□ 1.1
ARPC1A-203ENST00000463009 ZCCHC6Q5VYS8 1495 aaKnown RBP21.79■■□□□ 1.08
ARPC1A-203ENST00000463009 DCAF8L2P0C7V8 631 aa21.76■■□□□ 1.07
ARPC1A-203ENST00000463009 NACADO15069 1562 aa21.65■■□□□ 1.06
ARPC1A-203ENST00000463009 RB1CC1Q8TDY2 1594 aa21.65■■□□□ 1.06
ARPC1A-203ENST00000463009 DCAF1Q9Y4B6 1507 aa21.55■■□□□ 1.04
ARPC1A-203ENST00000463009 MYO15BQ96JP2 1530 aa21.55■■□□□ 1.04
ARPC1A-203ENST00000463009 PABPN1Q86U42 306 aaKnown RBP eCLIP21.19■□□□□ 0.98
ARPC1A-203ENST00000463009 SCRIBQ14160 1630 aa21.16■□□□□ 0.98
ARPC1A-203ENST00000463009 UNC13AQ9UPW8 1703 aa21.12■□□□□ 0.97
ARPC1A-203ENST00000463009 BICRAQ9NZM4 1560 aa20.93■□□□□ 0.94
ARPC1A-203ENST00000463009 SHROOM4Q9ULL8 1493 aa20.81■□□□□ 0.92
ARPC1A-203ENST00000463009 CECR2Q9BXF3 1484 aa20.69■□□□□ 0.9
ARPC1A-203ENST00000463009 DNAJC5Q9H3Z4 198 aa20.66■□□□□ 0.9
ARPC1A-203ENST00000463009 CC2D2AQ9P2K1 1620 aa20.64■□□□□ 0.89
ARPC1A-203ENST00000463009 EIF4G1Q04637 1599 aaKnown RBP20.45■□□□□ 0.86
ARPC1A-203ENST00000463009 BAZ1AQ9NRL2 1556 aaPredicted RBP20.22■□□□□ 0.83
ARPC1A-203ENST00000463009 SMARCA4P51532 1647 aa20.21■□□□□ 0.83
ARPC1A-203ENST00000463009 PHF23Q9BUL5 403 aaPredicted RBP20.11■□□□□ 0.81
ARPC1A-203ENST00000463009 MROH2BQ7Z745 1585 aa20.1■□□□□ 0.81
ARPC1A-203ENST00000463009 SMARCA2P51531 1590 aa20.04■□□□□ 0.8
ARPC1A-203ENST00000463009 ATAD2BQ9ULI0 1458 aa20.02■□□□□ 0.8
ARPC1A-203ENST00000463009 CUX2O14529 1486 aa20.01■□□□□ 0.79
ARPC1A-203ENST00000463009 PEG3Q9GZU2 1588 aa19.96■□□□□ 0.79
ARPC1A-203ENST00000463009 NCAPD3P42695 1498 aa19.94■□□□□ 0.78
ARPC1A-203ENST00000463009 RSF1Q96T23 1441 aaPredicted RBP19.93■□□□□ 0.78
ARPC1A-203ENST00000463009 BAZ1BQ9UIG0 1483 aaKnown RBP19.92■□□□□ 0.78
ARPC1A-203ENST00000463009 HMGXB3Q12766 1538 aa19.92■□□□□ 0.78
ARPC1A-203ENST00000463009 WIZO95785 1651 aa19.91■□□□□ 0.78
ARPC1A-203ENST00000463009 ERCC6Q03468 1493 aa19.85■□□□□ 0.77
ARPC1A-203ENST00000463009 TOP2AP11388 1531 aaKnown RBP19.73■□□□□ 0.75
ARPC1A-203ENST00000463009 SUPT5HO00267 1087 aaKnown RBP19.67■□□□□ 0.74
ARPC1A-203ENST00000463009 SENP3Q9H4L4 574 aaPredicted RBP19.52■□□□□ 0.72
ARPC1A-203ENST00000463009 TRIM41Q8WV44 630 aa19.51■□□□□ 0.71
ARPC1A-203ENST00000463009 NESP48681 1621 aa19.46■□□□□ 0.71
ARPC1A-203ENST00000463009 CCDC88BA6NC98 1476 aa19.46■□□□□ 0.71
ARPC1A-203ENST00000463009 LAMC3Q9Y6N6 1575 aa19.43■□□□□ 0.7
ARPC1A-203ENST00000463009 THOC2Q8NI27 1593 aaKnown RBP19.4■□□□□ 0.7
ARPC1A-203ENST00000463009 CADPSQ9ULU8 1353 aa19.4■□□□□ 0.7
ARPC1A-203ENST00000463009 CFTRP13569 1480 aa19.33■□□□□ 0.68
ARPC1A-203ENST00000463009 PDS5BQ9NTI5 1447 aa19.3■□□□□ 0.68
ARPC1A-203ENST00000463009 KIF21AQ7Z4S6 1674 aa19.24■□□□□ 0.67
ARPC1A-203ENST00000463009 PRDM2Q13029 1718 aa19.24■□□□□ 0.67
ARPC1A-203ENST00000463009 FANCD2Q9BXW9 1451 aa19.22■□□□□ 0.67
ARPC1A-203ENST00000463009 CEP164Q9UPV0 1460 aa19.19■□□□□ 0.66
ARPC1A-203ENST00000463009 MRC2Q9UBG0 1479 aa19.1■□□□□ 0.65
ARPC1A-203ENST00000463009 WDR62O43379 1518 aa19.02■□□□□ 0.64
ARPC1A-203ENST00000463009 OSCARQ8IYS5 282 aa18.99■□□□□ 0.63
ARPC1A-203ENST00000463009 URB2Q14146 1524 aaKnown RBP18.99■□□□□ 0.63
ARPC1A-203ENST00000463009 DNMBPQ6XZF7 1577 aa18.93■□□□□ 0.62
ARPC1A-203ENST00000463009 TOPBP1Q92547 1522 aa18.92■□□□□ 0.62
ARPC1A-203ENST00000463009 ABCC8Q09428 1581 aa18.92■□□□□ 0.62
ARPC1A-203ENST00000463009 CUX1P39880 1505 aa18.85■□□□□ 0.61
ARPC1A-203ENST00000463009 WRNQ14191 1432 aaPredicted RBP eCLIP18.83■□□□□ 0.61
ARPC1A-203ENST00000463009 FGD5Q6ZNL6 1462 aa18.78■□□□□ 0.6
ARPC1A-203ENST00000463009 SYNJ1O43426 1573 aa18.78■□□□□ 0.6
ARPC1A-203ENST00000463009 RIMBP3CA6NJZ7 1639 aa18.78■□□□□ 0.6
ARPC1A-203ENST00000463009 RIMBP3BA6NNM3 1639 aa18.78■□□□□ 0.6
ARPC1A-203ENST00000463009 RIMBP3Q9UFD9 1639 aa18.78■□□□□ 0.6
ARPC1A-203ENST00000463009 POLA1P09884 1462 aaPredicted RBP18.77■□□□□ 0.6
ARPC1A-203ENST00000463009 PLPPR3Q6T4P5 718 aa18.77■□□□□ 0.6
ARPC1A-203ENST00000463009 IFT140Q96RY7 1462 aa18.76■□□□□ 0.59
ARPC1A-203ENST00000463009 TOP2BQ02880 1626 aa18.75■□□□□ 0.59
ARPC1A-203ENST00000463009 BIVM-ERCC5R4GMW8 1640 aa18.75■□□□□ 0.59
ARPC1A-203ENST00000463009 RAD54L2Q9Y4B4 1467 aa18.7■□□□□ 0.58
ARPC1A-203ENST00000463009 SOGA1O94964 1423 aa18.69■□□□□ 0.58
ARPC1A-203ENST00000463009 ARHGEF11O15085 1522 aa18.67■□□□□ 0.58
ARPC1A-203ENST00000463009 TARBP1Q13395 1621 aaKnown RBP18.67■□□□□ 0.58
ARPC1A-203ENST00000463009 ZNF608Q9ULD9 1512 aaPredicted RBP18.64■□□□□ 0.57
ARPC1A-203ENST00000463009 EIF4G3O43432 1585 aaKnown RBP18.62■□□□□ 0.57
ARPC1A-203ENST00000463009 WDR97A6NE52 1622 aa18.6■□□□□ 0.57
ARPC1A-203ENST00000463009 TRHP20396 242 aaPredicted RBP18.58■□□□□ 0.56
ARPC1A-203ENST00000463009 ABCA10Q8WWZ4 1543 aa18.58■□□□□ 0.56
ARPC1A-203ENST00000463009 CYB5RLQ6IPT4 315 aa18.57■□□□□ 0.56
ARPC1A-203ENST00000463009 TDRD9Q8NDG6 1382 aaKnown RBP18.56■□□□□ 0.56
ARPC1A-203ENST00000463009 AQRO60306 1485 aaKnown RBP eCLIP18.56■□□□□ 0.567e-6■□□□□ 9.3
ARPC1A-203ENST00000463009 ABCA5Q8WWZ7 1642 aa18.5■□□□□ 0.55
ARPC1A-203ENST00000463009 GAPVD1Q14C86 1478 aa18.5■□□□□ 0.55
ARPC1A-203ENST00000463009 PBRM1Q86U86 1689 aa18.47■□□□□ 0.55
ARPC1A-203ENST00000463009 GRIN2BQ13224 1484 aa18.46■□□□□ 0.55
ARPC1A-203ENST00000463009 SNAPC4Q5SXM2 1469 aa18.44■□□□□ 0.54
ARPC1A-203ENST00000463009 ARAP1Q96P48 1450 aa18.44■□□□□ 0.54
ARPC1A-203ENST00000463009 KIF27Q86VH2 1401 aa18.43■□□□□ 0.54
ARPC1A-203ENST00000463009 MAGI1Q96QZ7 1491 aaPredicted RBP18.39■□□□□ 0.54
ARPC1A-203ENST00000463009 ERICH3Q5RHP9 1530 aa18.37■□□□□ 0.53
ARPC1A-203ENST00000463009 CHD1O14646 1710 aa18.35■□□□□ 0.53
ARPC1A-203ENST00000463009 FBLN2P98095 1184 aa18.35■□□□□ 0.53
ARPC1A-203ENST00000463009 ADAMTS12P58397 1594 aa18.34■□□□□ 0.53
ARPC1A-203ENST00000463009 SYNJ2O15056 1496 aa18.32■□□□□ 0.52
ARPC1A-203ENST00000463009 CHMP7Q8WUX9 453 aaPredicted RBP18.31■□□□□ 0.52
ARPC1A-203ENST00000463009 FHAD1B1AJZ9 1412 aa18.29■□□□□ 0.52
ARPC1A-203ENST00000463009 RUSC2Q8N2Y8 1516 aa18.28■□□□□ 0.52
ARPC1A-203ENST00000463009 CUL7Q14999 1698 aa18.28■□□□□ 0.52
ARPC1A-203ENST00000463009 IGF1RP08069 1367 aa18.26■□□□□ 0.51
ARPC1A-203ENST00000463009 GRIN2AQ12879 1464 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms