RNA–Protein interactions for RNA: ENST00000462283.5

NEK2-203, Transcript of NIMA related kinase 2, humanhuman

TSL 2

Gene NEK2, Length 801 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2-203ENST00000462283 NISCHQ9Y2I1 1504 aa21.65■■□□□ 1.06
NEK2-203ENST00000462283 CCDC180Q9P1Z9 1646 aa19.29■□□□□ 0.68
NEK2-203ENST00000462283 ABCC9O60706 1549 aa19.1■□□□□ 0.65
NEK2-203ENST00000462283 RB1CC1Q8TDY2 1594 aa18.26■□□□□ 0.51
NEK2-203ENST00000462283 DCAF8L2P0C7V8 631 aa18.25■□□□□ 0.51
NEK2-203ENST00000462283 NACADO15069 1562 aa18.2■□□□□ 0.5
NEK2-203ENST00000462283 MYO15BQ96JP2 1530 aa18.03■□□□□ 0.48
NEK2-203ENST00000462283 ZCCHC6Q5VYS8 1495 aaKnown RBP17.97■□□□□ 0.47
NEK2-203ENST00000462283 DCAF1Q9Y4B6 1507 aa17.88■□□□□ 0.45
NEK2-203ENST00000462283 PABPN1Q86U42 306 aaKnown RBP eCLIP17.85■□□□□ 0.45
NEK2-203ENST00000462283 UNC13AQ9UPW8 1703 aa17.84■□□□□ 0.45
NEK2-203ENST00000462283 DNAJC5BQ9UF47 199 aa17.75■□□□□ 0.43
NEK2-203ENST00000462283 BICRAQ9NZM4 1560 aa17.72■□□□□ 0.43
NEK2-203ENST00000462283 SCRIBQ14160 1630 aa17.6■□□□□ 0.41
NEK2-203ENST00000462283 SHROOM4Q9ULL8 1493 aa17.48■□□□□ 0.39
NEK2-203ENST00000462283 EIF4G1Q04637 1599 aaKnown RBP17.26■□□□□ 0.35
NEK2-203ENST00000462283 CC2D2AQ9P2K1 1620 aa17.25■□□□□ 0.35
NEK2-203ENST00000462283 CECR2Q9BXF3 1484 aa17.17■□□□□ 0.34
NEK2-203ENST00000462283 SMARCA4P51532 1647 aa16.81■□□□□ 0.28
NEK2-203ENST00000462283 NCAPD3P42695 1498 aa16.81■□□□□ 0.28
NEK2-203ENST00000462283 ATAD2BQ9ULI0 1458 aa16.8■□□□□ 0.28
NEK2-203ENST00000462283 BAZ1AQ9NRL2 1556 aaPredicted RBP16.77■□□□□ 0.28
NEK2-203ENST00000462283 SMARCA2P51531 1590 aa16.75■□□□□ 0.27
NEK2-203ENST00000462283 MROH2BQ7Z745 1585 aa16.68■□□□□ 0.26
NEK2-203ENST00000462283 HMGXB3Q12766 1538 aa16.68■□□□□ 0.26
NEK2-203ENST00000462283 PEG3Q9GZU2 1588 aa16.64■□□□□ 0.25
NEK2-203ENST00000462283 BAZ1BQ9UIG0 1483 aaKnown RBP16.63■□□□□ 0.25
NEK2-203ENST00000462283 WIZO95785 1651 aa16.5■□□□□ 0.23
NEK2-203ENST00000462283 NESP48681 1621 aa16.47■□□□□ 0.23
NEK2-203ENST00000462283 ERCC6Q03468 1493 aa16.46■□□□□ 0.23
NEK2-203ENST00000462283 RSF1Q96T23 1441 aaPredicted RBP16.44■□□□□ 0.22
NEK2-203ENST00000462283 LAMC3Q9Y6N6 1575 aa16.38■□□□□ 0.21
NEK2-203ENST00000462283 CUX2O14529 1486 aa16.35■□□□□ 0.21
NEK2-203ENST00000462283 CADPSQ9ULU8 1353 aa16.33■□□□□ 0.2
NEK2-203ENST00000462283 PDS5BQ9NTI5 1447 aa16.3■□□□□ 0.2
NEK2-203ENST00000462283 TOP2AP11388 1531 aaKnown RBP16.29■□□□□ 0.2
NEK2-203ENST00000462283 KIF21AQ7Z4S6 1674 aa16.24■□□□□ 0.19
NEK2-203ENST00000462283 THOC2Q8NI27 1593 aaKnown RBP16.21■□□□□ 0.19
NEK2-203ENST00000462283 CFTRP13569 1480 aa16.17■□□□□ 0.18
NEK2-203ENST00000462283 CCDC88BA6NC98 1476 aa16.14■□□□□ 0.17
NEK2-203ENST00000462283 FANCD2Q9BXW9 1451 aa16.12■□□□□ 0.17
NEK2-203ENST00000462283 MRC2Q9UBG0 1479 aa16.12■□□□□ 0.17
NEK2-203ENST00000462283 DNAJC5Q9H3Z4 198 aa16.12■□□□□ 0.17
NEK2-203ENST00000462283 CEP164Q9UPV0 1460 aa16.1■□□□□ 0.17
NEK2-203ENST00000462283 WDR62O43379 1518 aa16.06■□□□□ 0.16
NEK2-203ENST00000462283 PRDM2Q13029 1718 aa16■□□□□ 0.15
NEK2-203ENST00000462283 URB2Q14146 1524 aaKnown RBP15.97■□□□□ 0.15
NEK2-203ENST00000462283 SUPT5HO00267 1087 aaKnown RBP15.94■□□□□ 0.14
NEK2-203ENST00000462283 TOPBP1Q92547 1522 aa15.84■□□□□ 0.13
NEK2-203ENST00000462283 ABCC8Q09428 1581 aa15.83■□□□□ 0.13
NEK2-203ENST00000462283 DNMBPQ6XZF7 1577 aa15.79■□□□□ 0.12
NEK2-203ENST00000462283 IFT140Q96RY7 1462 aa15.78■□□□□ 0.12
NEK2-203ENST00000462283 ZNF608Q9ULD9 1512 aaPredicted RBP15.73■□□□□ 0.11
NEK2-203ENST00000462283 OSCARQ8IYS5 282 aa15.7■□□□□ 0.1
NEK2-203ENST00000462283 POLA1P09884 1462 aaPredicted RBP15.69■□□□□ 0.1
NEK2-203ENST00000462283 TARBP1Q13395 1621 aaKnown RBP15.67■□□□□ 0.1
NEK2-203ENST00000462283 SOGA1O94964 1423 aa15.67■□□□□ 0.1
NEK2-203ENST00000462283 CUX1P39880 1505 aa15.65■□□□□ 0.1
NEK2-203ENST00000462283 AQRO60306 1485 aaKnown RBP eCLIP15.65■□□□□ 0.12e-6■■■□□ 15.4
NEK2-203ENST00000462283 RAD54L2Q9Y4B4 1467 aa15.65■□□□□ 0.1
NEK2-203ENST00000462283 EIF4G3O43432 1585 aaKnown RBP15.63■□□□□ 0.09
NEK2-203ENST00000462283 FGD5Q6ZNL6 1462 aa15.63■□□□□ 0.09
NEK2-203ENST00000462283 TDRD9Q8NDG6 1382 aaKnown RBP15.6■□□□□ 0.09
NEK2-203ENST00000462283 FBLN2P98095 1184 aa15.52■□□□□ 0.08
NEK2-203ENST00000462283 WDR97A6NE52 1622 aa15.51■□□□□ 0.07
NEK2-203ENST00000462283 TRIM41Q8WV44 630 aa15.51■□□□□ 0.07
NEK2-203ENST00000462283 WRNQ14191 1432 aaPredicted RBP eCLIP15.5■□□□□ 0.07
NEK2-203ENST00000462283 CHD1O14646 1710 aa15.49■□□□□ 0.07
NEK2-203ENST00000462283 GRIN2BQ13224 1484 aa15.47■□□□□ 0.07
NEK2-203ENST00000462283 ABCA10Q8WWZ4 1543 aa15.47■□□□□ 0.07
NEK2-203ENST00000462283 TOP2BQ02880 1626 aa15.46■□□□□ 0.07
NEK2-203ENST00000462283 SNAPC4Q5SXM2 1469 aa15.46■□□□□ 0.07
NEK2-203ENST00000462283 AEBP2Q6ZN18 517 aaPredicted RBP15.46■□□□□ 0.07
NEK2-203ENST00000462283 BIVM-ERCC5R4GMW8 1640 aa15.46■□□□□ 0.06
NEK2-203ENST00000462283 GAPVD1Q14C86 1478 aa15.46■□□□□ 0.06
NEK2-203ENST00000462283 CHMP7Q8WUX9 453 aaPredicted RBP15.45■□□□□ 0.06
NEK2-203ENST00000462283 SYNJ1O43426 1573 aa15.45■□□□□ 0.06
NEK2-203ENST00000462283 CHIC1Q5VXU3 224 aa15.44■□□□□ 0.06
NEK2-203ENST00000462283 MAGI1Q96QZ7 1491 aaPredicted RBP15.44■□□□□ 0.06
NEK2-203ENST00000462283 RIMBP3CA6NJZ7 1639 aa15.41■□□□□ 0.06
NEK2-203ENST00000462283 RIMBP3BA6NNM3 1639 aa15.41■□□□□ 0.06
NEK2-203ENST00000462283 RIMBP3Q9UFD9 1639 aa15.41■□□□□ 0.06
NEK2-203ENST00000462283 PBRM1Q86U86 1689 aa15.4■□□□□ 0.06
NEK2-203ENST00000462283 ABCA5Q8WWZ7 1642 aa15.39■□□□□ 0.05
NEK2-203ENST00000462283 SYNJ2O15056 1496 aa15.39■□□□□ 0.05
NEK2-203ENST00000462283 ARHGEF11O15085 1522 aa15.38■□□□□ 0.05
NEK2-203ENST00000462283 CYB5RLQ6IPT4 315 aa15.32■□□□□ 0.04
NEK2-203ENST00000462283 CLASP1Q7Z460 1538 aa15.31■□□□□ 0.04
NEK2-203ENST00000462283 ERICH3Q5RHP9 1530 aa15.27■□□□□ 0.04
NEK2-203ENST00000462283 FHAD1B1AJZ9 1412 aa15.27■□□□□ 0.04
NEK2-203ENST00000462283 ADAMTS12P58397 1594 aa15.26■□□□□ 0.03
NEK2-203ENST00000462283 GRIN2AQ12879 1464 aa15.26■□□□□ 0.03
NEK2-203ENST00000462283 ARAP1Q96P48 1450 aa15.25■□□□□ 0.03
NEK2-203ENST00000462283 NUP160Q12769 1436 aa15.2■□□□□ 0.02
NEK2-203ENST00000462283 CEP170Q5SW79 1584 aa15.19■□□□□ 0.02
NEK2-203ENST00000462283 KIF27Q86VH2 1401 aa15.18■□□□□ 0.02
NEK2-203ENST00000462283 IGF1RP08069 1367 aa15.18■□□□□ 0.02
NEK2-203ENST00000462283 JPH4Q96JJ6 628 aa15.12■□□□□ 0.01
NEK2-203ENST00000462283 ERCC6L2Q5T890 1561 aa15.11■□□□□ 0.01
NEK2-203ENST00000462283 SHROOM2Q13796 1616 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 150.1 ms