RNA–Protein interactions for RNA: ENST00000462264.3

RN7SL39P-201, Transcript of RNA, 7SL, cytoplasmic 39, pseudogene, humanhuman

BASIC

Gene RN7SL39P, Length 297 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL39P-201ENST00000462264 NISCHQ9Y2I1 1504 aa16.01■□□□□ 0.15
RN7SL39P-201ENST00000462264 CCDC180Q9P1Z9 1646 aa14.41□□□□□ -0.1
RN7SL39P-201ENST00000462264 ABCC9O60706 1549 aa14.18□□□□□ -0.14
RN7SL39P-201ENST00000462264 RB1CC1Q8TDY2 1594 aa13.58□□□□□ -0.24
RN7SL39P-201ENST00000462264 NACADO15069 1562 aa13.48□□□□□ -0.25
RN7SL39P-201ENST00000462264 UNC13AQ9UPW8 1703 aa13.44□□□□□ -0.26
RN7SL39P-201ENST00000462264 DCAF8L2P0C7V8 631 aa13.44□□□□□ -0.26
RN7SL39P-201ENST00000462264 ZCCHC6Q5VYS8 1495 aaKnown RBP13.32□□□□□ -0.28
RN7SL39P-201ENST00000462264 MYO15BQ96JP2 1530 aa13.29□□□□□ -0.28
RN7SL39P-201ENST00000462264 DCAF1Q9Y4B6 1507 aa13.19□□□□□ -0.3
RN7SL39P-201ENST00000462264 BICRAQ9NZM4 1560 aa13.17□□□□□ -0.3
RN7SL39P-201ENST00000462264 SCRIBQ14160 1630 aa13.17□□□□□ -0.3
RN7SL39P-201ENST00000462264 PABPN1Q86U42 306 aaKnown RBP eCLIP13.16□□□□□ -0.3
RN7SL39P-201ENST00000462264 DNAJC5BQ9UF47 199 aa13.03□□□□□ -0.32
RN7SL39P-201ENST00000462264 SHROOM4Q9ULL8 1493 aa12.93□□□□□ -0.34
RN7SL39P-201ENST00000462264 CC2D2AQ9P2K1 1620 aa12.85□□□□□ -0.35
RN7SL39P-201ENST00000462264 EIF4G1Q04637 1599 aaKnown RBP12.85□□□□□ -0.35
RN7SL39P-201ENST00000462264 CECR2Q9BXF3 1484 aa12.72□□□□□ -0.37
RN7SL39P-201ENST00000462264 SMARCA4P51532 1647 aa12.53□□□□□ -0.4
RN7SL39P-201ENST00000462264 BAZ1AQ9NRL2 1556 aaPredicted RBP12.45□□□□□ -0.42
RN7SL39P-201ENST00000462264 SMARCA2P51531 1590 aa12.42□□□□□ -0.42
RN7SL39P-201ENST00000462264 ATAD2BQ9ULI0 1458 aa12.4□□□□□ -0.43
RN7SL39P-201ENST00000462264 HMGXB3Q12766 1538 aa12.38□□□□□ -0.43
RN7SL39P-201ENST00000462264 NCAPD3P42695 1498 aa12.37□□□□□ -0.43
RN7SL39P-201ENST00000462264 MROH2BQ7Z745 1585 aa12.36□□□□□ -0.43
RN7SL39P-201ENST00000462264 BAZ1BQ9UIG0 1483 aaKnown RBP12.34□□□□□ -0.43
RN7SL39P-201ENST00000462264 PEG3Q9GZU2 1588 aa12.34□□□□□ -0.43
RN7SL39P-201ENST00000462264 WIZO95785 1651 aa12.31□□□□□ -0.44
RN7SL39P-201ENST00000462264 NESP48681 1621 aa12.23□□□□□ -0.45
RN7SL39P-201ENST00000462264 ERCC6Q03468 1493 aa12.23□□□□□ -0.45
RN7SL39P-201ENST00000462264 KIF21AQ7Z4S6 1674 aa12.21□□□□□ -0.45
RN7SL39P-201ENST00000462264 LAMC3Q9Y6N6 1575 aa12.18□□□□□ -0.46
RN7SL39P-201ENST00000462264 THOC2Q8NI27 1593 aaKnown RBP12.13□□□□□ -0.47
RN7SL39P-201ENST00000462264 RSF1Q96T23 1441 aaPredicted RBP12.11□□□□□ -0.47
RN7SL39P-201ENST00000462264 CUX2O14529 1486 aa12.1□□□□□ -0.47
RN7SL39P-201ENST00000462264 TOP2AP11388 1531 aaKnown RBP12.1□□□□□ -0.47
RN7SL39P-201ENST00000462264 PRDM2Q13029 1718 aa12.07□□□□□ -0.48
RN7SL39P-201ENST00000462264 PDS5BQ9NTI5 1447 aa12.03□□□□□ -0.48
RN7SL39P-201ENST00000462264 CADPSQ9ULU8 1353 aa12.01□□□□□ -0.49
RN7SL39P-201ENST00000462264 CEP164Q9UPV0 1460 aa11.96□□□□□ -0.49
RN7SL39P-201ENST00000462264 MRC2Q9UBG0 1479 aa11.95□□□□□ -0.5
RN7SL39P-201ENST00000462264 WDR62O43379 1518 aa11.95□□□□□ -0.5
RN7SL39P-201ENST00000462264 FANCD2Q9BXW9 1451 aa11.94□□□□□ -0.5
RN7SL39P-201ENST00000462264 CFTRP13569 1480 aa11.93□□□□□ -0.5
RN7SL39P-201ENST00000462264 CCDC88BA6NC98 1476 aa11.91□□□□□ -0.5
RN7SL39P-201ENST00000462264 URB2Q14146 1524 aaKnown RBP11.84□□□□□ -0.51
RN7SL39P-201ENST00000462264 DNAJC5Q9H3Z4 198 aa11.81□□□□□ -0.52
RN7SL39P-201ENST00000462264 DNMBPQ6XZF7 1577 aa11.75□□□□□ -0.53
RN7SL39P-201ENST00000462264 TOPBP1Q92547 1522 aa11.74□□□□□ -0.53
RN7SL39P-201ENST00000462264 SUPT5HO00267 1087 aaKnown RBP11.73□□□□□ -0.53
RN7SL39P-201ENST00000462264 EIF4G3O43432 1585 aaKnown RBP11.71□□□□□ -0.54
RN7SL39P-201ENST00000462264 ABCC8Q09428 1581 aa11.68□□□□□ -0.54
RN7SL39P-201ENST00000462264 ZNF608Q9ULD9 1512 aaPredicted RBP11.67□□□□□ -0.54
RN7SL39P-201ENST00000462264 IFT140Q96RY7 1462 aa11.67□□□□□ -0.54
RN7SL39P-201ENST00000462264 TARBP1Q13395 1621 aaKnown RBP11.67□□□□□ -0.54
RN7SL39P-201ENST00000462264 CHD1O14646 1710 aa11.65□□□□□ -0.54
RN7SL39P-201ENST00000462264 POLA1P09884 1462 aaPredicted RBP11.63□□□□□ -0.55
RN7SL39P-201ENST00000462264 CUX1P39880 1505 aa11.61□□□□□ -0.55
RN7SL39P-201ENST00000462264 WDR97A6NE52 1622 aa11.61□□□□□ -0.55
RN7SL39P-201ENST00000462264 FGD5Q6ZNL6 1462 aa11.6□□□□□ -0.55
RN7SL39P-201ENST00000462264 PBRM1Q86U86 1689 aa11.59□□□□□ -0.55
RN7SL39P-201ENST00000462264 RAD54L2Q9Y4B4 1467 aa11.59□□□□□ -0.55
RN7SL39P-201ENST00000462264 AQRO60306 1485 aaKnown RBP eCLIP11.56□□□□□ -0.56
RN7SL39P-201ENST00000462264 SOGA1O94964 1423 aa11.54□□□□□ -0.56
RN7SL39P-201ENST00000462264 BIVM-ERCC5R4GMW8 1640 aa11.54□□□□□ -0.56
RN7SL39P-201ENST00000462264 SYNJ1O43426 1573 aa11.51□□□□□ -0.57
RN7SL39P-201ENST00000462264 RIMBP3CA6NJZ7 1639 aa11.51□□□□□ -0.57
RN7SL39P-201ENST00000462264 RIMBP3BA6NNM3 1639 aa11.51□□□□□ -0.57
RN7SL39P-201ENST00000462264 RIMBP3Q9UFD9 1639 aa11.51□□□□□ -0.57
RN7SL39P-201ENST00000462264 OSCARQ8IYS5 282 aa11.51□□□□□ -0.57
RN7SL39P-201ENST00000462264 TDRD9Q8NDG6 1382 aaKnown RBP11.5□□□□□ -0.57
RN7SL39P-201ENST00000462264 SNAPC4Q5SXM2 1469 aa11.5□□□□□ -0.57
RN7SL39P-201ENST00000462264 TOP2BQ02880 1626 aa11.49□□□□□ -0.57
RN7SL39P-201ENST00000462264 ABCA5Q8WWZ7 1642 aa11.49□□□□□ -0.57
RN7SL39P-201ENST00000462264 TRIM41Q8WV44 630 aa11.48□□□□□ -0.57
RN7SL39P-201ENST00000462264 FBLN2P98095 1184 aa11.46□□□□□ -0.57
RN7SL39P-201ENST00000462264 WRNQ14191 1432 aaPredicted RBP eCLIP11.45□□□□□ -0.58
RN7SL39P-201ENST00000462264 ABCA10Q8WWZ4 1543 aa11.44□□□□□ -0.58
RN7SL39P-201ENST00000462264 GRIN2BQ13224 1484 aa11.44□□□□□ -0.58
RN7SL39P-201ENST00000462264 GAPVD1Q14C86 1478 aa11.44□□□□□ -0.58
RN7SL39P-201ENST00000462264 MAGI1Q96QZ7 1491 aaPredicted RBP11.44□□□□□ -0.58
RN7SL39P-201ENST00000462264 ARHGEF11O15085 1522 aa11.43□□□□□ -0.58
RN7SL39P-201ENST00000462264 ADAMTS12P58397 1594 aa11.4□□□□□ -0.58
RN7SL39P-201ENST00000462264 CLASP1Q7Z460 1538 aa11.39□□□□□ -0.59
RN7SL39P-201ENST00000462264 SYNJ2O15056 1496 aa11.38□□□□□ -0.59
RN7SL39P-201ENST00000462264 CHMP7Q8WUX9 453 aaPredicted RBP11.36□□□□□ -0.59
RN7SL39P-201ENST00000462264 CEP170Q5SW79 1584 aa11.33□□□□□ -0.6
RN7SL39P-201ENST00000462264 ARAP1Q96P48 1450 aa11.32□□□□□ -0.6
RN7SL39P-201ENST00000462264 GRIN2AQ12879 1464 aa11.32□□□□□ -0.6
RN7SL39P-201ENST00000462264 ERICH3Q5RHP9 1530 aa11.31□□□□□ -0.6
RN7SL39P-201ENST00000462264 CYB5RLQ6IPT4 315 aa11.27□□□□□ -0.61
RN7SL39P-201ENST00000462264 CUL7Q14999 1698 aa11.27□□□□□ -0.61
RN7SL39P-201ENST00000462264 FHAD1B1AJZ9 1412 aa11.26□□□□□ -0.61
RN7SL39P-201ENST00000462264 ERCC6L2Q5T890 1561 aa11.26□□□□□ -0.61
RN7SL39P-201ENST00000462264 RUSC2Q8N2Y8 1516 aa11.25□□□□□ -0.61
RN7SL39P-201ENST00000462264 SHROOM2Q13796 1616 aa11.24□□□□□ -0.61
RN7SL39P-201ENST00000462264 NUP160Q12769 1436 aa11.23□□□□□ -0.61
RN7SL39P-201ENST00000462264 KIF27Q86VH2 1401 aa11.21□□□□□ -0.61
RN7SL39P-201ENST00000462264 TRHP20396 242 aaPredicted RBP11.14□□□□□ -0.63
RN7SL39P-201ENST00000462264 CTTNBP2Q8WZ74 1663 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms