RNA–Protein interactions for RNA: ENST00000462212.5

ITSN1-222, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 1,102 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-222ENST00000462212 NISCHQ9Y2I1 1504 aa20.53■□□□□ 0.88
ITSN1-222ENST00000462212 CCDC180Q9P1Z9 1646 aa18.28■□□□□ 0.52
ITSN1-222ENST00000462212 ABCC9O60706 1549 aa17.91■□□□□ 0.46
ITSN1-222ENST00000462212 RB1CC1Q8TDY2 1594 aa17.22■□□□□ 0.35
ITSN1-222ENST00000462212 NACADO15069 1562 aa17.2■□□□□ 0.34
ITSN1-222ENST00000462212 MYO15BQ96JP2 1530 aa17.12■□□□□ 0.33
ITSN1-222ENST00000462212 ZCCHC6Q5VYS8 1495 aaKnown RBP17.09■□□□□ 0.33
ITSN1-222ENST00000462212 DCAF8L2P0C7V8 631 aa17.07■□□□□ 0.32
ITSN1-222ENST00000462212 DCAF1Q9Y4B6 1507 aa17.01■□□□□ 0.31
ITSN1-222ENST00000462212 UNC13AQ9UPW8 1703 aa16.84■□□□□ 0.29
ITSN1-222ENST00000462212 BICRAQ9NZM4 1560 aa16.73■□□□□ 0.27
ITSN1-222ENST00000462212 PABPN1Q86U42 306 aaKnown RBP eCLIP16.71■□□□□ 0.27
ITSN1-222ENST00000462212 SCRIBQ14160 1630 aa16.63■□□□□ 0.25
ITSN1-222ENST00000462212 SHROOM4Q9ULL8 1493 aa16.57■□□□□ 0.24
ITSN1-222ENST00000462212 DNAJC5BQ9UF47 199 aa16.53■□□□□ 0.24
ITSN1-222ENST00000462212 EIF4G1Q04637 1599 aaKnown RBP16.28■□□□□ 0.2
ITSN1-222ENST00000462212 CC2D2AQ9P2K1 1620 aa16.22■□□□□ 0.19
ITSN1-222ENST00000462212 CECR2Q9BXF3 1484 aa16.12■□□□□ 0.17
ITSN1-222ENST00000462212 SMARCA4P51532 1647 aa15.94■□□□□ 0.14
ITSN1-222ENST00000462212 AEBP2Q6ZN18 517 aaPredicted RBP15.93■□□□□ 0.14
ITSN1-222ENST00000462212 BAZ1AQ9NRL2 1556 aaPredicted RBP15.9■□□□□ 0.14
ITSN1-222ENST00000462212 NCAPD3P42695 1498 aa15.89■□□□□ 0.13
ITSN1-222ENST00000462212 ATAD2BQ9ULI0 1458 aa15.87■□□□□ 0.13
ITSN1-222ENST00000462212 SMARCA2P51531 1590 aa15.84■□□□□ 0.13
ITSN1-222ENST00000462212 PEG3Q9GZU2 1588 aa15.81■□□□□ 0.12
ITSN1-222ENST00000462212 MROH2BQ7Z745 1585 aa15.8■□□□□ 0.12
ITSN1-222ENST00000462212 HMGXB3Q12766 1538 aa15.8■□□□□ 0.12
ITSN1-222ENST00000462212 BAZ1BQ9UIG0 1483 aaKnown RBP15.71■□□□□ 0.11
ITSN1-222ENST00000462212 WIZO95785 1651 aa15.61■□□□□ 0.09
ITSN1-222ENST00000462212 RSF1Q96T23 1441 aaPredicted RBP15.6■□□□□ 0.09
ITSN1-222ENST00000462212 NESP48681 1621 aa15.49■□□□□ 0.07
ITSN1-222ENST00000462212 TOP2AP11388 1531 aaKnown RBP15.47■□□□□ 0.07
ITSN1-222ENST00000462212 LAMC3Q9Y6N6 1575 aa15.46■□□□□ 0.07
ITSN1-222ENST00000462212 ERCC6Q03468 1493 aa15.43■□□□□ 0.06
ITSN1-222ENST00000462212 CADPSQ9ULU8 1353 aa15.4■□□□□ 0.06
ITSN1-222ENST00000462212 PDS5BQ9NTI5 1447 aa15.34■□□□□ 0.05
ITSN1-222ENST00000462212 CUX2O14529 1486 aa15.34■□□□□ 0.05
ITSN1-222ENST00000462212 CFTRP13569 1480 aa15.31■□□□□ 0.04
ITSN1-222ENST00000462212 KIF21AQ7Z4S6 1674 aa15.3■□□□□ 0.04
ITSN1-222ENST00000462212 THOC2Q8NI27 1593 aaKnown RBP15.29■□□□□ 0.04
ITSN1-222ENST00000462212 CCDC88BA6NC98 1476 aa15.27■□□□□ 0.04
ITSN1-222ENST00000462212 DNAJC5Q9H3Z4 198 aa15.24■□□□□ 0.03
ITSN1-222ENST00000462212 FANCD2Q9BXW9 1451 aa15.21■□□□□ 0.03
ITSN1-222ENST00000462212 MRC2Q9UBG0 1479 aa15.2■□□□□ 0.02
ITSN1-222ENST00000462212 CEP164Q9UPV0 1460 aa15.2■□□□□ 0.02
ITSN1-222ENST00000462212 WDR62O43379 1518 aa15.17■□□□□ 0.02
ITSN1-222ENST00000462212 PRDM2Q13029 1718 aa15.17■□□□□ 0.02
ITSN1-222ENST00000462212 URB2Q14146 1524 aaKnown RBP15.07■□□□□ 0
ITSN1-222ENST00000462212 SUPT5HO00267 1087 aaKnown RBP15.07■□□□□ 0
ITSN1-222ENST00000462212 CHIC1Q5VXU3 224 aa15.06■□□□□ 0
ITSN1-222ENST00000462212 TOPBP1Q92547 1522 aa14.97□□□□□ -0.01
ITSN1-222ENST00000462212 ABCC8Q09428 1581 aa14.96□□□□□ -0.01
ITSN1-222ENST00000462212 DNMBPQ6XZF7 1577 aa14.94□□□□□ -0.02
ITSN1-222ENST00000462212 IFT140Q96RY7 1462 aa14.89□□□□□ -0.03
ITSN1-222ENST00000462212 POLA1P09884 1462 aaPredicted RBP14.84□□□□□ -0.03
ITSN1-222ENST00000462212 CUX1P39880 1505 aa14.83□□□□□ -0.04
ITSN1-222ENST00000462212 ZNF608Q9ULD9 1512 aaPredicted RBP14.82□□□□□ -0.04
ITSN1-222ENST00000462212 TARBP1Q13395 1621 aaKnown RBP14.82□□□□□ -0.04
ITSN1-222ENST00000462212 FGD5Q6ZNL6 1462 aa14.78□□□□□ -0.04
ITSN1-222ENST00000462212 EIF4G3O43432 1585 aaKnown RBP14.76□□□□□ -0.05
ITSN1-222ENST00000462212 RAD54L2Q9Y4B4 1467 aa14.76□□□□□ -0.05
ITSN1-222ENST00000462212 SOGA1O94964 1423 aa14.75□□□□□ -0.05
ITSN1-222ENST00000462212 AQRO60306 1485 aaKnown RBP eCLIP14.72□□□□□ -0.05
ITSN1-222ENST00000462212 WDR97A6NE52 1622 aa14.72□□□□□ -0.05
ITSN1-222ENST00000462212 WRNQ14191 1432 aaPredicted RBP eCLIP14.7□□□□□ -0.06
ITSN1-222ENST00000462212 TOP2BQ02880 1626 aa14.69□□□□□ -0.06
ITSN1-222ENST00000462212 BIVM-ERCC5R4GMW8 1640 aa14.69□□□□□ -0.06
ITSN1-222ENST00000462212 TDRD9Q8NDG6 1382 aaKnown RBP14.68□□□□□ -0.06
ITSN1-222ENST00000462212 SYNJ1O43426 1573 aa14.67□□□□□ -0.06
ITSN1-222ENST00000462212 OSCARQ8IYS5 282 aa14.66□□□□□ -0.06
ITSN1-222ENST00000462212 ABCA10Q8WWZ4 1543 aa14.66□□□□□ -0.06
ITSN1-222ENST00000462212 GRIN2BQ13224 1484 aa14.61□□□□□ -0.07
ITSN1-222ENST00000462212 ABCA5Q8WWZ7 1642 aa14.6□□□□□ -0.07
ITSN1-222ENST00000462212 GAPVD1Q14C86 1478 aa14.59□□□□□ -0.07
ITSN1-222ENST00000462212 SNAPC4Q5SXM2 1469 aa14.59□□□□□ -0.07
ITSN1-222ENST00000462212 MAGI1Q96QZ7 1491 aaPredicted RBP14.58□□□□□ -0.08
ITSN1-222ENST00000462212 CHD1O14646 1710 aa14.58□□□□□ -0.08
ITSN1-222ENST00000462212 PBRM1Q86U86 1689 aa14.56□□□□□ -0.08
ITSN1-222ENST00000462212 SYNJ2O15056 1496 aa14.52□□□□□ -0.08
ITSN1-222ENST00000462212 FBLN2P98095 1184 aa14.5□□□□□ -0.09
ITSN1-222ENST00000462212 CHMP7Q8WUX9 453 aaPredicted RBP14.48□□□□□ -0.09
ITSN1-222ENST00000462212 ERICH3Q5RHP9 1530 aa14.47□□□□□ -0.09
ITSN1-222ENST00000462212 ADAMTS12P58397 1594 aa14.46□□□□□ -0.09
ITSN1-222ENST00000462212 ARHGEF11O15085 1522 aa14.45□□□□□ -0.1
ITSN1-222ENST00000462212 CLASP1Q7Z460 1538 aa14.45□□□□□ -0.1
ITSN1-222ENST00000462212 RIMBP3CA6NJZ7 1639 aa14.44□□□□□ -0.1
ITSN1-222ENST00000462212 RIMBP3BA6NNM3 1639 aa14.44□□□□□ -0.1
ITSN1-222ENST00000462212 RIMBP3Q9UFD9 1639 aa14.44□□□□□ -0.1
ITSN1-222ENST00000462212 FHAD1B1AJZ9 1412 aa14.43□□□□□ -0.1
ITSN1-222ENST00000462212 GRIN2AQ12879 1464 aa14.42□□□□□ -0.1
ITSN1-222ENST00000462212 KIF27Q86VH2 1401 aa14.4□□□□□ -0.1
ITSN1-222ENST00000462212 NUP160Q12769 1436 aa14.39□□□□□ -0.11
ITSN1-222ENST00000462212 IGF1RP08069 1367 aa14.36□□□□□ -0.11
ITSN1-222ENST00000462212 CEP170Q5SW79 1584 aa14.35□□□□□ -0.11
ITSN1-222ENST00000462212 TRIM41Q8WV44 630 aa14.35□□□□□ -0.11
ITSN1-222ENST00000462212 ARAP1Q96P48 1450 aa14.33□□□□□ -0.12
ITSN1-222ENST00000462212 CUL7Q14999 1698 aa14.32□□□□□ -0.12
ITSN1-222ENST00000462212 SHROOM2Q13796 1616 aa14.28□□□□□ -0.12
ITSN1-222ENST00000462212 CYB5RLQ6IPT4 315 aa14.27□□□□□ -0.13
ITSN1-222ENST00000462212 CARMIL1Q5VZK9 1371 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms