RNA–Protein interactions for RNA: ENST00000461934.5

UBA3-205, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 1,224 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-205ENST00000461934 NISCHQ9Y2I1 1504 aa32.86■■■□□ 2.85
UBA3-205ENST00000461934 CCDC180Q9P1Z9 1646 aa29.6■■■□□ 2.33
UBA3-205ENST00000461934 ABCC9O60706 1549 aa29.34■■■□□ 2.29
UBA3-205ENST00000461934 RB1CC1Q8TDY2 1594 aa28.07■■■□□ 2.08
UBA3-205ENST00000461934 NACADO15069 1562 aa27.86■■■□□ 2.05
UBA3-205ENST00000461934 DCAF8L2P0C7V8 631 aa27.75■■■□□ 2.03
UBA3-205ENST00000461934 UNC13AQ9UPW8 1703 aa27.58■■■□□ 2.01
UBA3-205ENST00000461934 MYO15BQ96JP2 1530 aa27.44■■□□□ 1.98
UBA3-205ENST00000461934 PABPN1Q86U42 306 aaKnown RBP eCLIP27.27■■□□□ 1.96
UBA3-205ENST00000461934 ZCCHC6Q5VYS8 1495 aaKnown RBP27.25■■□□□ 1.95
UBA3-205ENST00000461934 DNAJC5BQ9UF47 199 aa27.23■■□□□ 1.95
UBA3-205ENST00000461934 DCAF1Q9Y4B6 1507 aa27.15■■□□□ 1.94
UBA3-205ENST00000461934 BICRAQ9NZM4 1560 aa27.14■■□□□ 1.93
UBA3-205ENST00000461934 SCRIBQ14160 1630 aa26.94■■□□□ 1.9
UBA3-205ENST00000461934 SHROOM4Q9ULL8 1493 aa26.81■■□□□ 1.88
UBA3-205ENST00000461934 AEBP2Q6ZN18 517 aaPredicted RBP26.68■■□□□ 1.86
UBA3-205ENST00000461934 CC2D2AQ9P2K1 1620 aa26.57■■□□□ 1.84
UBA3-205ENST00000461934 EIF4G1Q04637 1599 aaKnown RBP26.51■■□□□ 1.83
UBA3-205ENST00000461934 CECR2Q9BXF3 1484 aa26.41■■□□□ 1.82
UBA3-205ENST00000461934 SMARCA4P51532 1647 aa25.69■■□□□ 1.7
UBA3-205ENST00000461934 SMARCA2P51531 1590 aa25.61■■□□□ 1.69
UBA3-205ENST00000461934 NCAPD3P42695 1498 aa25.61■■□□□ 1.69
UBA3-205ENST00000461934 BAZ1AQ9NRL2 1556 aaPredicted RBP25.57■■□□□ 1.68
UBA3-205ENST00000461934 ATAD2BQ9ULI0 1458 aa25.57■■□□□ 1.68
UBA3-205ENST00000461934 HMGXB3Q12766 1538 aa25.53■■□□□ 1.68
UBA3-205ENST00000461934 BAZ1BQ9UIG0 1483 aaKnown RBP25.41■■□□□ 1.66
UBA3-205ENST00000461934 ERCC6Q03468 1493 aa25.4■■□□□ 1.66
UBA3-205ENST00000461934 PEG3Q9GZU2 1588 aa25.37■■□□□ 1.65
UBA3-205ENST00000461934 MROH2BQ7Z745 1585 aa25.31■■□□□ 1.64
UBA3-205ENST00000461934 CUX2O14529 1486 aa25.26■■□□□ 1.63
UBA3-205ENST00000461934 NESP48681 1621 aa25.21■■□□□ 1.63
UBA3-205ENST00000461934 LAMC3Q9Y6N6 1575 aa25.16■■□□□ 1.62
UBA3-205ENST00000461934 WIZO95785 1651 aa25.13■■□□□ 1.61
UBA3-205ENST00000461934 KIF21AQ7Z4S6 1674 aa25.08■■□□□ 1.61
UBA3-205ENST00000461934 THOC2Q8NI27 1593 aaKnown RBP25.01■■□□□ 1.59
UBA3-205ENST00000461934 DNAJC5Q9H3Z4 198 aa24.99■■□□□ 1.59
UBA3-205ENST00000461934 PDS5BQ9NTI5 1447 aa24.95■■□□□ 1.58
UBA3-205ENST00000461934 CHIC1Q5VXU3 224 aa24.94■■□□□ 1.58
UBA3-205ENST00000461934 CADPSQ9ULU8 1353 aa24.85■■□□□ 1.57
UBA3-205ENST00000461934 RSF1Q96T23 1441 aaPredicted RBP24.78■■□□□ 1.56
UBA3-205ENST00000461934 TOP2AP11388 1531 aaKnown RBP24.76■■□□□ 1.55
UBA3-205ENST00000461934 MRC2Q9UBG0 1479 aa24.72■■□□□ 1.55
UBA3-205ENST00000461934 PRDM2Q13029 1718 aa24.7■■□□□ 1.54
UBA3-205ENST00000461934 CEP164Q9UPV0 1460 aa24.69■■□□□ 1.54
UBA3-205ENST00000461934 WDR62O43379 1518 aa24.66■■□□□ 1.54
UBA3-205ENST00000461934 FANCD2Q9BXW9 1451 aa24.63■■□□□ 1.53
UBA3-205ENST00000461934 CFTRP13569 1480 aa24.59■■□□□ 1.53
UBA3-205ENST00000461934 CCDC88BA6NC98 1476 aa24.41■■□□□ 1.5
UBA3-205ENST00000461934 URB2Q14146 1524 aaKnown RBP24.38■■□□□ 1.49
UBA3-205ENST00000461934 ABCC8Q09428 1581 aa24.19■■□□□ 1.46
UBA3-205ENST00000461934 TOPBP1Q92547 1522 aa24.17■■□□□ 1.46
UBA3-205ENST00000461934 IFT140Q96RY7 1462 aa24.15■■□□□ 1.46
UBA3-205ENST00000461934 DNMBPQ6XZF7 1577 aa24.15■■□□□ 1.46
UBA3-205ENST00000461934 OSCARQ8IYS5 282 aa24.09■■□□□ 1.45
UBA3-205ENST00000461934 TRIM41Q8WV44 630 aa24.06■■□□□ 1.44
UBA3-205ENST00000461934 EIF4G3O43432 1585 aaKnown RBP24.05■■□□□ 1.44
UBA3-205ENST00000461934 ZNF608Q9ULD9 1512 aaPredicted RBP24.05■■□□□ 1.44
UBA3-205ENST00000461934 TARBP1Q13395 1621 aaKnown RBP23.97■■□□□ 1.43
UBA3-205ENST00000461934 CHD1O14646 1710 aa23.96■■□□□ 1.43
UBA3-205ENST00000461934 POLA1P09884 1462 aaPredicted RBP23.91■■□□□ 1.42
UBA3-205ENST00000461934 RIMBP3CA6NJZ7 1639 aa23.87■■□□□ 1.41
UBA3-205ENST00000461934 RIMBP3BA6NNM3 1639 aa23.87■■□□□ 1.41
UBA3-205ENST00000461934 RIMBP3Q9UFD9 1639 aa23.87■■□□□ 1.41
UBA3-205ENST00000461934 SUPT5HO00267 1087 aaKnown RBP23.86■■□□□ 1.41
UBA3-205ENST00000461934 AQRO60306 1485 aaKnown RBP eCLIP23.85■■□□□ 1.411e-9■■■■■ 37.7
UBA3-205ENST00000461934 FGD5Q6ZNL6 1462 aa23.81■■□□□ 1.4
UBA3-205ENST00000461934 WDR97A6NE52 1622 aa23.81■■□□□ 1.4
UBA3-205ENST00000461934 SOGA1O94964 1423 aa23.81■■□□□ 1.4
UBA3-205ENST00000461934 RAD54L2Q9Y4B4 1467 aa23.81■■□□□ 1.4
UBA3-205ENST00000461934 CUX1P39880 1505 aa23.79■■□□□ 1.4
UBA3-205ENST00000461934 FBLN2P98095 1184 aa23.75■■□□□ 1.39
UBA3-205ENST00000461934 ARHGEF11O15085 1522 aa23.73■■□□□ 1.39
UBA3-205ENST00000461934 PBRM1Q86U86 1689 aa23.73■■□□□ 1.39
UBA3-205ENST00000461934 TDRD9Q8NDG6 1382 aaKnown RBP23.71■■□□□ 1.39
UBA3-205ENST00000461934 SNAPC4Q5SXM2 1469 aa23.67■■□□□ 1.38
UBA3-205ENST00000461934 MAGI1Q96QZ7 1491 aaPredicted RBP23.62■■□□□ 1.37
UBA3-205ENST00000461934 GRIN2BQ13224 1484 aa23.62■■□□□ 1.37
UBA3-205ENST00000461934 SYNJ1O43426 1573 aa23.61■■□□□ 1.37
UBA3-205ENST00000461934 CHMP7Q8WUX9 453 aaPredicted RBP23.57■■□□□ 1.36
UBA3-205ENST00000461934 GAPVD1Q14C86 1478 aa23.56■■□□□ 1.36
UBA3-205ENST00000461934 BIVM-ERCC5R4GMW8 1640 aa23.55■■□□□ 1.36
UBA3-205ENST00000461934 ABCA5Q8WWZ7 1642 aa23.55■■□□□ 1.36
UBA3-205ENST00000461934 ABCA10Q8WWZ4 1543 aa23.53■■□□□ 1.36
UBA3-205ENST00000461934 SYNJ2O15056 1496 aa23.52■■□□□ 1.36
UBA3-205ENST00000461934 CYB5RLQ6IPT4 315 aa23.52■■□□□ 1.36
UBA3-205ENST00000461934 TOP2BQ02880 1626 aa23.51■■□□□ 1.35
UBA3-205ENST00000461934 CLASP1Q7Z460 1538 aa23.5■■□□□ 1.35
UBA3-205ENST00000461934 WRNQ14191 1432 aaPredicted RBP eCLIP23.46■■□□□ 1.35
UBA3-205ENST00000461934 ARAP1Q96P48 1450 aa23.46■■□□□ 1.35
UBA3-205ENST00000461934 ADAMTS12P58397 1594 aa23.36■■□□□ 1.33
UBA3-205ENST00000461934 GRIN2AQ12879 1464 aa23.31■■□□□ 1.32
UBA3-205ENST00000461934 TRHP20396 242 aaPredicted RBP23.3■■□□□ 1.32
UBA3-205ENST00000461934 ERICH3Q5RHP9 1530 aa23.28■■□□□ 1.32
UBA3-205ENST00000461934 CEP170Q5SW79 1584 aa23.24■■□□□ 1.31
UBA3-205ENST00000461934 FHAD1B1AJZ9 1412 aa23.24■■□□□ 1.31
UBA3-205ENST00000461934 NUP160Q12769 1436 aa23.16■■□□□ 1.3
UBA3-205ENST00000461934 SHROOM2Q13796 1616 aa23.15■■□□□ 1.3
UBA3-205ENST00000461934 ERCC6L2Q5T890 1561 aa23.12■■□□□ 1.29
UBA3-205ENST00000461934 CUL7Q14999 1698 aa23.07■■□□□ 1.28
UBA3-205ENST00000461934 RUSC2Q8N2Y8 1516 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms