RNA–Protein interactions for RNA: ENST00000461891.5

CYTH3-203, Transcript of cytohesin 3, humanhuman

TSL 4

Gene CYTH3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-203ENST00000461891 NISCHQ9Y2I1 1504 aa27.51■■■□□ 2
CYTH3-203ENST00000461891 ABCC9O60706 1549 aa24.98■■□□□ 1.59
CYTH3-203ENST00000461891 CCDC180Q9P1Z9 1646 aa24.67■■□□□ 1.54
CYTH3-203ENST00000461891 DNAJC5BQ9UF47 199 aa23.75■■□□□ 1.39
CYTH3-203ENST00000461891 RB1CC1Q8TDY2 1594 aa23.65■■□□□ 1.38
CYTH3-203ENST00000461891 NACADO15069 1562 aa23.46■■□□□ 1.35
CYTH3-203ENST00000461891 DCAF8L2P0C7V8 631 aa23.39■■□□□ 1.33
CYTH3-203ENST00000461891 PABPN1Q86U42 306 aaKnown RBP eCLIP23.3■■□□□ 1.32
CYTH3-203ENST00000461891 MYO15BQ96JP2 1530 aa23.1■■□□□ 1.29
CYTH3-203ENST00000461891 BICRAQ9NZM4 1560 aa22.98■■□□□ 1.27
CYTH3-203ENST00000461891 UNC13AQ9UPW8 1703 aa22.98■■□□□ 1.27
CYTH3-203ENST00000461891 ZCCHC6Q5VYS8 1495 aaKnown RBP22.96■■□□□ 1.27
CYTH3-203ENST00000461891 DCAF1Q9Y4B6 1507 aa22.71■■□□□ 1.23
CYTH3-203ENST00000461891 SHROOM4Q9ULL8 1493 aa22.66■■□□□ 1.22
CYTH3-203ENST00000461891 CECR2Q9BXF3 1484 aa22.54■■□□□ 1.2
CYTH3-203ENST00000461891 CC2D2AQ9P2K1 1620 aa22.52■■□□□ 1.2
CYTH3-203ENST00000461891 SCRIBQ14160 1630 aa22.49■■□□□ 1.19
CYTH3-203ENST00000461891 EIF4G1Q04637 1599 aaKnown RBP22.42■■□□□ 1.18
CYTH3-203ENST00000461891 DNAJC5Q9H3Z4 198 aa21.97■■□□□ 1.11
CYTH3-203ENST00000461891 NCAPD3P42695 1498 aa21.73■■□□□ 1.07
CYTH3-203ENST00000461891 CUX2O14529 1486 aa21.62■■□□□ 1.05
CYTH3-203ENST00000461891 ATAD2BQ9ULI0 1458 aa21.6■■□□□ 1.05
CYTH3-203ENST00000461891 ERCC6Q03468 1493 aa21.58■■□□□ 1.04
CYTH3-203ENST00000461891 SMARCA2P51531 1590 aa21.48■■□□□ 1.03
CYTH3-203ENST00000461891 HMGXB3Q12766 1538 aa21.46■■□□□ 1.03
CYTH3-203ENST00000461891 SMARCA4P51532 1647 aa21.44■■□□□ 1.02
CYTH3-203ENST00000461891 NESP48681 1621 aa21.4■■□□□ 1.02
CYTH3-203ENST00000461891 BAZ1BQ9UIG0 1483 aaKnown RBP21.34■■□□□ 1.01
CYTH3-203ENST00000461891 BAZ1AQ9NRL2 1556 aaPredicted RBP21.34■■□□□ 1.01
CYTH3-203ENST00000461891 PEG3Q9GZU2 1588 aa21.27■■□□□ 1
CYTH3-203ENST00000461891 MROH2BQ7Z745 1585 aa21.24■□□□□ 0.99
CYTH3-203ENST00000461891 LAMC3Q9Y6N6 1575 aa21.18■□□□□ 0.98
CYTH3-203ENST00000461891 THOC2Q8NI27 1593 aaKnown RBP21.15■□□□□ 0.98
CYTH3-203ENST00000461891 PDS5BQ9NTI5 1447 aa21.14■□□□□ 0.98
CYTH3-203ENST00000461891 RSF1Q96T23 1441 aaPredicted RBP21.13■□□□□ 0.97
CYTH3-203ENST00000461891 CADPSQ9ULU8 1353 aa21.07■□□□□ 0.96
CYTH3-203ENST00000461891 WIZO95785 1651 aa21.05■□□□□ 0.96
CYTH3-203ENST00000461891 SUPT5HO00267 1087 aaKnown RBP21.01■□□□□ 0.95
CYTH3-203ENST00000461891 KIF21AQ7Z4S6 1674 aa21■□□□□ 0.95
CYTH3-203ENST00000461891 MRC2Q9UBG0 1479 aa20.93■□□□□ 0.94
CYTH3-203ENST00000461891 TRIM41Q8WV44 630 aa20.86■□□□□ 0.93
CYTH3-203ENST00000461891 WDR62O43379 1518 aa20.86■□□□□ 0.93
CYTH3-203ENST00000461891 CEP164Q9UPV0 1460 aa20.79■□□□□ 0.92
CYTH3-203ENST00000461891 FANCD2Q9BXW9 1451 aa20.77■□□□□ 0.92
CYTH3-203ENST00000461891 TOP2AP11388 1531 aaKnown RBP20.76■□□□□ 0.91
CYTH3-203ENST00000461891 CFTRP13569 1480 aa20.75■□□□□ 0.91
CYTH3-203ENST00000461891 OSCARQ8IYS5 282 aa20.7■□□□□ 0.9
CYTH3-203ENST00000461891 URB2Q14146 1524 aaKnown RBP20.62■□□□□ 0.89
CYTH3-203ENST00000461891 CCDC88BA6NC98 1476 aa20.58■□□□□ 0.89
CYTH3-203ENST00000461891 IFT140Q96RY7 1462 aa20.41■□□□□ 0.86
CYTH3-203ENST00000461891 ZNF608Q9ULD9 1512 aaPredicted RBP20.4■□□□□ 0.86
CYTH3-203ENST00000461891 TOPBP1Q92547 1522 aa20.35■□□□□ 0.85
CYTH3-203ENST00000461891 ABCC8Q09428 1581 aa20.31■□□□□ 0.84
CYTH3-203ENST00000461891 PRDM2Q13029 1718 aa20.3■□□□□ 0.84
CYTH3-203ENST00000461891 RIMBP3CA6NJZ7 1639 aa20.3■□□□□ 0.84
CYTH3-203ENST00000461891 RIMBP3BA6NNM3 1639 aa20.3■□□□□ 0.84
CYTH3-203ENST00000461891 RIMBP3Q9UFD9 1639 aa20.3■□□□□ 0.84
CYTH3-203ENST00000461891 ARHGEF11O15085 1522 aa20.26■□□□□ 0.83
CYTH3-203ENST00000461891 CYB5RLQ6IPT4 315 aa20.22■□□□□ 0.83
CYTH3-203ENST00000461891 AQRO60306 1485 aaKnown RBP eCLIP20.22■□□□□ 0.83
CYTH3-203ENST00000461891 DNMBPQ6XZF7 1577 aa20.21■□□□□ 0.83
CYTH3-203ENST00000461891 EIF4G3O43432 1585 aaKnown RBP20.19■□□□□ 0.82
CYTH3-203ENST00000461891 FBLN2P98095 1184 aa20.15■□□□□ 0.82
CYTH3-203ENST00000461891 TARBP1Q13395 1621 aaKnown RBP20.15■□□□□ 0.82
CYTH3-203ENST00000461891 POLA1P09884 1462 aaPredicted RBP20.13■□□□□ 0.81
CYTH3-203ENST00000461891 SOGA1O94964 1423 aa20.09■□□□□ 0.81
CYTH3-203ENST00000461891 TDRD9Q8NDG6 1382 aaKnown RBP20.08■□□□□ 0.81
CYTH3-203ENST00000461891 RAD54L2Q9Y4B4 1467 aa20.08■□□□□ 0.81
CYTH3-203ENST00000461891 ARAP1Q96P48 1450 aa20.05■□□□□ 0.8
CYTH3-203ENST00000461891 TRHP20396 242 aaPredicted RBP20.04■□□□□ 0.8
CYTH3-203ENST00000461891 CHD1O14646 1710 aa20.03■□□□□ 0.8
CYTH3-203ENST00000461891 CHMP7Q8WUX9 453 aaPredicted RBP19.98■□□□□ 0.79
CYTH3-203ENST00000461891 FGD5Q6ZNL6 1462 aa19.96■□□□□ 0.79
CYTH3-203ENST00000461891 SNAPC4Q5SXM2 1469 aa19.95■□□□□ 0.78
CYTH3-203ENST00000461891 CUX1P39880 1505 aa19.92■□□□□ 0.78
CYTH3-203ENST00000461891 WDR97A6NE52 1622 aa19.91■□□□□ 0.78
CYTH3-203ENST00000461891 GRIN2BQ13224 1484 aa19.9■□□□□ 0.78
CYTH3-203ENST00000461891 MAGI1Q96QZ7 1491 aaPredicted RBP19.9■□□□□ 0.78
CYTH3-203ENST00000461891 CLASP1Q7Z460 1538 aa19.89■□□□□ 0.77
CYTH3-203ENST00000461891 WRNQ14191 1432 aaPredicted RBP eCLIP19.87■□□□□ 0.77
CYTH3-203ENST00000461891 SYNJ1O43426 1573 aa19.86■□□□□ 0.77
CYTH3-203ENST00000461891 CHIC1Q5VXU3 224 aa19.85■□□□□ 0.77
CYTH3-203ENST00000461891 SYNJ2O15056 1496 aa19.85■□□□□ 0.77
CYTH3-203ENST00000461891 GAPVD1Q14C86 1478 aa19.8■□□□□ 0.76
CYTH3-203ENST00000461891 TOP2BQ02880 1626 aa19.78■□□□□ 0.76
CYTH3-203ENST00000461891 BIVM-ERCC5R4GMW8 1640 aa19.77■□□□□ 0.76
CYTH3-203ENST00000461891 ABCA10Q8WWZ4 1543 aa19.74■□□□□ 0.75
CYTH3-203ENST00000461891 ABCA5Q8WWZ7 1642 aa19.66■□□□□ 0.74
CYTH3-203ENST00000461891 PBRM1Q86U86 1689 aa19.65■□□□□ 0.74
CYTH3-203ENST00000461891 GRIN2AQ12879 1464 aa19.62■□□□□ 0.73
CYTH3-203ENST00000461891 AEBP2Q6ZN18 517 aaPredicted RBP19.6■□□□□ 0.73
CYTH3-203ENST00000461891 NUP160Q12769 1436 aa19.59■□□□□ 0.73
CYTH3-203ENST00000461891 ERCC6L2Q5T890 1561 aa19.57■□□□□ 0.72
CYTH3-203ENST00000461891 FHAD1B1AJZ9 1412 aa19.56■□□□□ 0.72
CYTH3-203ENST00000461891 ADAMTS12P58397 1594 aa19.53■□□□□ 0.72
CYTH3-203ENST00000461891 CEP170Q5SW79 1584 aa19.53■□□□□ 0.72
CYTH3-203ENST00000461891 RUSC2Q8N2Y8 1516 aa19.51■□□□□ 0.71
CYTH3-203ENST00000461891 ERICH3Q5RHP9 1530 aa19.47■□□□□ 0.71
CYTH3-203ENST00000461891 JPH4Q96JJ6 628 aa19.47■□□□□ 0.71
CYTH3-203ENST00000461891 SHROOM2Q13796 1616 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms