RNA–Protein interactions for RNA: ENST00000461665.5

MDH2-206, Transcript of malate dehydrogenase 2, humanhuman

TSL 2

Gene MDH2, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH2-206ENST00000461665 NISCHQ9Y2I1 1504 aa16.19■□□□□ 0.18
MDH2-206ENST00000461665 ABCC9O60706 1549 aa15.27■□□□□ 0.04
MDH2-206ENST00000461665 DNAJC5BQ9UF47 199 aa14.95□□□□□ -0.02
MDH2-206ENST00000461665 CCDC180Q9P1Z9 1646 aa14.67□□□□□ -0.06
MDH2-206ENST00000461665 RB1CC1Q8TDY2 1594 aa14.26□□□□□ -0.13
MDH2-206ENST00000461665 PABPN1Q86U42 306 aaKnown RBP eCLIP14.18□□□□□ -0.14
MDH2-206ENST00000461665 DNAJC5Q9H3Z4 198 aa14.12□□□□□ -0.15
MDH2-206ENST00000461665 NACADO15069 1562 aa14.06□□□□□ -0.16
MDH2-206ENST00000461665 BICRAQ9NZM4 1560 aa13.92□□□□□ -0.18
MDH2-206ENST00000461665 UNC13AQ9UPW8 1703 aa13.88□□□□□ -0.19
MDH2-206ENST00000461665 DCAF8L2P0C7V8 631 aa13.88□□□□□ -0.19
MDH2-206ENST00000461665 CECR2Q9BXF3 1484 aa13.83□□□□□ -0.2
MDH2-206ENST00000461665 CC2D2AQ9P2K1 1620 aa13.75□□□□□ -0.21
MDH2-206ENST00000461665 MYO15BQ96JP2 1530 aa13.74□□□□□ -0.21
MDH2-206ENST00000461665 SHROOM4Q9ULL8 1493 aa13.67□□□□□ -0.22
MDH2-206ENST00000461665 EIF4G1Q04637 1599 aaKnown RBP13.59□□□□□ -0.23
MDH2-206ENST00000461665 CUX2O14529 1486 aa13.41□□□□□ -0.26
MDH2-206ENST00000461665 DCAF1Q9Y4B6 1507 aa13.35□□□□□ -0.27
MDH2-206ENST00000461665 SCRIBQ14160 1630 aa13.34□□□□□ -0.27
MDH2-206ENST00000461665 ZCCHC6Q5VYS8 1495 aaKnown RBP13.28□□□□□ -0.28
MDH2-206ENST00000461665 ERCC6Q03468 1493 aa13.19□□□□□ -0.3
MDH2-206ENST00000461665 TRIM41Q8WV44 630 aa13.17□□□□□ -0.3
MDH2-206ENST00000461665 NCAPD3P42695 1498 aa13.05□□□□□ -0.32
MDH2-206ENST00000461665 NESP48681 1621 aa12.98□□□□□ -0.33
MDH2-206ENST00000461665 ATAD2BQ9ULI0 1458 aa12.91□□□□□ -0.34
MDH2-206ENST00000461665 THOC2Q8NI27 1593 aaKnown RBP12.91□□□□□ -0.34
MDH2-206ENST00000461665 HMGXB3Q12766 1538 aa12.83□□□□□ -0.35
MDH2-206ENST00000461665 SMARCA2P51531 1590 aa12.79□□□□□ -0.36
MDH2-206ENST00000461665 LAMC3Q9Y6N6 1575 aa12.77□□□□□ -0.37
MDH2-206ENST00000461665 PDS5BQ9NTI5 1447 aa12.75□□□□□ -0.37
MDH2-206ENST00000461665 OSCARQ8IYS5 282 aa12.74□□□□□ -0.37
MDH2-206ENST00000461665 BAZ1BQ9UIG0 1483 aaKnown RBP12.7□□□□□ -0.38
MDH2-206ENST00000461665 KIF21AQ7Z4S6 1674 aa12.7□□□□□ -0.38
MDH2-206ENST00000461665 SMARCA4P51532 1647 aa12.7□□□□□ -0.38
MDH2-206ENST00000461665 BAZ1AQ9NRL2 1556 aaPredicted RBP12.66□□□□□ -0.38
MDH2-206ENST00000461665 MRC2Q9UBG0 1479 aa12.65□□□□□ -0.38
MDH2-206ENST00000461665 WDR62O43379 1518 aa12.63□□□□□ -0.39
MDH2-206ENST00000461665 PEG3Q9GZU2 1588 aa12.62□□□□□ -0.39
MDH2-206ENST00000461665 CADPSQ9ULU8 1353 aa12.62□□□□□ -0.39
MDH2-206ENST00000461665 RIMBP3CA6NJZ7 1639 aa12.55□□□□□ -0.4
MDH2-206ENST00000461665 RIMBP3BA6NNM3 1639 aa12.55□□□□□ -0.4
MDH2-206ENST00000461665 RIMBP3Q9UFD9 1639 aa12.55□□□□□ -0.4
MDH2-206ENST00000461665 AEBP2Q6ZN18 517 aaPredicted RBP12.5□□□□□ -0.41
MDH2-206ENST00000461665 ARHGEF11O15085 1522 aa12.48□□□□□ -0.41
MDH2-206ENST00000461665 CEP164Q9UPV0 1460 aa12.47□□□□□ -0.41
MDH2-206ENST00000461665 TRHP20396 242 aaPredicted RBP12.47□□□□□ -0.41
MDH2-206ENST00000461665 CYB5RLQ6IPT4 315 aa12.47□□□□□ -0.41
MDH2-206ENST00000461665 MROH2BQ7Z745 1585 aa12.46□□□□□ -0.42
MDH2-206ENST00000461665 FANCD2Q9BXW9 1451 aa12.44□□□□□ -0.42
MDH2-206ENST00000461665 URB2Q14146 1524 aaKnown RBP12.38□□□□□ -0.43
MDH2-206ENST00000461665 CFTRP13569 1480 aa12.35□□□□□ -0.43
MDH2-206ENST00000461665 ARAP1Q96P48 1450 aa12.34□□□□□ -0.43
MDH2-206ENST00000461665 ZNF608Q9ULD9 1512 aaPredicted RBP12.32□□□□□ -0.44
MDH2-206ENST00000461665 IFT140Q96RY7 1462 aa12.27□□□□□ -0.44
MDH2-206ENST00000461665 RSF1Q96T23 1441 aaPredicted RBP12.25□□□□□ -0.45
MDH2-206ENST00000461665 WIZO95785 1651 aa12.22□□□□□ -0.45
MDH2-206ENST00000461665 EIF4G3O43432 1585 aaKnown RBP12.15□□□□□ -0.46
MDH2-206ENST00000461665 AQRO60306 1485 aaKnown RBP eCLIP12.14□□□□□ -0.471e-9■■■■□ 26.6
MDH2-206ENST00000461665 FBLN2P98095 1184 aa12.14□□□□□ -0.47
MDH2-206ENST00000461665 TOPBP1Q92547 1522 aa12.14□□□□□ -0.47
MDH2-206ENST00000461665 CHD1O14646 1710 aa12.13□□□□□ -0.47
MDH2-206ENST00000461665 ILDR1Q86SU0 546 aaPredicted RBP12.11□□□□□ -0.47
MDH2-206ENST00000461665 ABCC8Q09428 1581 aa12.08□□□□□ -0.48
MDH2-206ENST00000461665 CLASP1Q7Z460 1538 aa12.07□□□□□ -0.48
MDH2-206ENST00000461665 TARBP1Q13395 1621 aaKnown RBP12.07□□□□□ -0.48
MDH2-206ENST00000461665 TOP2AP11388 1531 aaKnown RBP12.06□□□□□ -0.48
MDH2-206ENST00000461665 DNMBPQ6XZF7 1577 aa12.01□□□□□ -0.49
MDH2-206ENST00000461665 PRDM2Q13029 1718 aa12.01□□□□□ -0.49
MDH2-206ENST00000461665 TDRD9Q8NDG6 1382 aaKnown RBP12□□□□□ -0.49
MDH2-206ENST00000461665 CHMP7Q8WUX9 453 aaPredicted RBP11.99□□□□□ -0.49
MDH2-206ENST00000461665 GAPVD1Q14C86 1478 aa11.99□□□□□ -0.49
MDH2-206ENST00000461665 CCDC88BA6NC98 1476 aa11.98□□□□□ -0.49
MDH2-206ENST00000461665 POLA1P09884 1462 aaPredicted RBP11.98□□□□□ -0.49
MDH2-206ENST00000461665 SYNJ1O43426 1573 aa11.96□□□□□ -0.49
MDH2-206ENST00000461665 SNAPC4Q5SXM2 1469 aa11.96□□□□□ -0.49
MDH2-206ENST00000461665 RAD54L2Q9Y4B4 1467 aa11.96□□□□□ -0.49
MDH2-206ENST00000461665 SOGA1O94964 1423 aa11.94□□□□□ -0.5
MDH2-206ENST00000461665 KDM4FA0A1W2PPD8 638 aa11.93□□□□□ -0.5
MDH2-206ENST00000461665 MAGI1Q96QZ7 1491 aaPredicted RBP11.92□□□□□ -0.5
MDH2-206ENST00000461665 SYNJ2O15056 1496 aa11.9□□□□□ -0.5
MDH2-206ENST00000461665 WDR97A6NE52 1622 aa11.88□□□□□ -0.51
MDH2-206ENST00000461665 GRIN2BQ13224 1484 aa11.88□□□□□ -0.51
MDH2-206ENST00000461665 ERCC6L2Q5T890 1561 aa11.84□□□□□ -0.51
MDH2-206ENST00000461665 FGD5Q6ZNL6 1462 aa11.81□□□□□ -0.52
MDH2-206ENST00000461665 KIF13AQ9H1H9 1805 aa11.8□□□□□ -0.52
MDH2-206ENST00000461665 FAM69CQ0P6D2 419 aa11.77□□□□□ -0.53
MDH2-206ENST00000461665 ABCC10Q5T3U5 1492 aa11.76□□□□□ -0.53
MDH2-206ENST00000461665 CEP170Q5SW79 1584 aa11.75□□□□□ -0.53
MDH2-206ENST00000461665 CUX1P39880 1505 aa11.73□□□□□ -0.53
MDH2-206ENST00000461665 NUP160Q12769 1436 aa11.73□□□□□ -0.53
MDH2-206ENST00000461665 GRIN2AQ12879 1464 aa11.71□□□□□ -0.53
MDH2-206ENST00000461665 SHROOM2Q13796 1616 aa11.7□□□□□ -0.54
MDH2-206ENST00000461665 PBRM1Q86U86 1689 aa11.68□□□□□ -0.54
MDH2-206ENST00000461665 ABCA10Q8WWZ4 1543 aa11.67□□□□□ -0.54
MDH2-206ENST00000461665 KDM6BO15054 1643 aa11.67□□□□□ -0.54
MDH2-206ENST00000461665 ABCA5Q8WWZ7 1642 aa11.66□□□□□ -0.54
MDH2-206ENST00000461665 DIP2BQ9P265 1576 aa11.66□□□□□ -0.54
MDH2-206ENST00000461665 MAPKBP1O60336 1514 aa11.65□□□□□ -0.54
MDH2-206ENST00000461665 NPM1P06748 294 aaKnown RBP eCLIP11.65□□□□□ -0.54
MDH2-206ENST00000461665 PRG4Q92954 1404 aaPredicted RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms