RNA–Protein interactions for RNA: ENST00000461441.5

STX1A-205, Transcript of syntaxin 1A, humanhuman

TSL 4

Gene STX1A, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STX1A-205ENST00000461441 NISCHQ9Y2I1 1504 aa27.12■■□□□ 1.93
STX1A-205ENST00000461441 CCDC180Q9P1Z9 1646 aa23.88■■□□□ 1.41
STX1A-205ENST00000461441 ABCC9O60706 1549 aa22.78■■□□□ 1.24
STX1A-205ENST00000461441 ZCCHC6Q5VYS8 1495 aaKnown RBP22.7■■□□□ 1.22
STX1A-205ENST00000461441 DCAF1Q9Y4B6 1507 aa22.48■■□□□ 1.19
STX1A-205ENST00000461441 MYO15BQ96JP2 1530 aa22.38■■□□□ 1.17
STX1A-205ENST00000461441 DCAF8L2P0C7V8 631 aa22.3■■□□□ 1.16
STX1A-205ENST00000461441 NACADO15069 1562 aa22.29■■□□□ 1.16
STX1A-205ENST00000461441 RB1CC1Q8TDY2 1594 aa22.17■■□□□ 1.14
STX1A-205ENST00000461441 SCRIBQ14160 1630 aa21.78■■□□□ 1.08
STX1A-205ENST00000461441 UNC13AQ9UPW8 1703 aa21.77■■□□□ 1.08
STX1A-205ENST00000461441 SHROOM4Q9ULL8 1493 aa21.66■■□□□ 1.06
STX1A-205ENST00000461441 BICRAQ9NZM4 1560 aa21.57■■□□□ 1.04
STX1A-205ENST00000461441 PABPN1Q86U42 306 aaKnown RBP eCLIP21.38■■□□□ 1.01
STX1A-205ENST00000461441 CECR2Q9BXF3 1484 aa21.07■□□□□ 0.96
STX1A-205ENST00000461441 BAZ1AQ9NRL2 1556 aaPredicted RBP20.95■□□□□ 0.94
STX1A-205ENST00000461441 SMARCA4P51532 1647 aa20.93■□□□□ 0.94
STX1A-205ENST00000461441 MROH2BQ7Z745 1585 aa20.92■□□□□ 0.94
STX1A-205ENST00000461441 EIF4G1Q04637 1599 aaKnown RBP20.89■□□□□ 0.94
STX1A-205ENST00000461441 RSF1Q96T23 1441 aaPredicted RBP20.87■□□□□ 0.93
STX1A-205ENST00000461441 PEG3Q9GZU2 1588 aa20.75■□□□□ 0.91
STX1A-205ENST00000461441 WIZO95785 1651 aa20.72■□□□□ 0.91
STX1A-205ENST00000461441 CC2D2AQ9P2K1 1620 aa20.67■□□□□ 0.9
STX1A-205ENST00000461441 ATAD2BQ9ULI0 1458 aa20.67■□□□□ 0.9
STX1A-205ENST00000461441 SMARCA2P51531 1590 aa20.64■□□□□ 0.9
STX1A-205ENST00000461441 SUPT5HO00267 1087 aaKnown RBP20.64■□□□□ 0.89
STX1A-205ENST00000461441 NCAPD3P42695 1498 aa20.59■□□□□ 0.89
STX1A-205ENST00000461441 HMGXB3Q12766 1538 aa20.53■□□□□ 0.88
STX1A-205ENST00000461441 DNAJC5BQ9UF47 199 aa20.51■□□□□ 0.87
STX1A-205ENST00000461441 TOP2AP11388 1531 aaKnown RBP20.51■□□□□ 0.87
STX1A-205ENST00000461441 BAZ1BQ9UIG0 1483 aaKnown RBP20.48■□□□□ 0.87
STX1A-205ENST00000461441 CCDC88BA6NC98 1476 aa20.27■□□□□ 0.84
STX1A-205ENST00000461441 CFTRP13569 1480 aa20■□□□□ 0.79
STX1A-205ENST00000461441 CADPSQ9ULU8 1353 aa19.98■□□□□ 0.79
STX1A-205ENST00000461441 LAMC3Q9Y6N6 1575 aa19.93■□□□□ 0.78
STX1A-205ENST00000461441 NESP48681 1621 aa19.92■□□□□ 0.78
STX1A-205ENST00000461441 PRDM2Q13029 1718 aa19.92■□□□□ 0.78
STX1A-205ENST00000461441 FANCD2Q9BXW9 1451 aa19.74■□□□□ 0.75
STX1A-205ENST00000461441 PDS5BQ9NTI5 1447 aa19.74■□□□□ 0.75
STX1A-205ENST00000461441 KIF21AQ7Z4S6 1674 aa19.71■□□□□ 0.75
STX1A-205ENST00000461441 ABCC8Q09428 1581 aa19.69■□□□□ 0.74
STX1A-205ENST00000461441 CHIC1Q5VXU3 224 aa19.66■□□□□ 0.74
STX1A-205ENST00000461441 CEP164Q9UPV0 1460 aa19.64■□□□□ 0.73
STX1A-205ENST00000461441 WRNQ14191 1432 aaPredicted RBP eCLIP19.61■□□□□ 0.73
STX1A-205ENST00000461441 SYNJ1O43426 1573 aa19.58■□□□□ 0.73
STX1A-205ENST00000461441 CUX1P39880 1505 aa19.58■□□□□ 0.73
STX1A-205ENST00000461441 TOP2BQ02880 1626 aa19.56■□□□□ 0.72
STX1A-205ENST00000461441 BIVM-ERCC5R4GMW8 1640 aa19.56■□□□□ 0.72
STX1A-205ENST00000461441 URB2Q14146 1524 aaKnown RBP19.56■□□□□ 0.72
STX1A-205ENST00000461441 ERCC6Q03468 1493 aa19.54■□□□□ 0.72
STX1A-205ENST00000461441 DNMBPQ6XZF7 1577 aa19.53■□□□□ 0.72
STX1A-205ENST00000461441 MRC2Q9UBG0 1479 aa19.53■□□□□ 0.72
STX1A-205ENST00000461441 THOC2Q8NI27 1593 aaKnown RBP19.52■□□□□ 0.71
STX1A-205ENST00000461441 TOPBP1Q92547 1522 aa19.51■□□□□ 0.71
STX1A-205ENST00000461441 WDR62O43379 1518 aa19.48■□□□□ 0.71
STX1A-205ENST00000461441 TRIM41Q8WV44 630 aa19.47■□□□□ 0.71
STX1A-205ENST00000461441 FGD5Q6ZNL6 1462 aa19.4■□□□□ 0.7
STX1A-205ENST00000461441 POLA1P09884 1462 aaPredicted RBP19.38■□□□□ 0.69
STX1A-205ENST00000461441 CUX2O14529 1486 aa19.34■□□□□ 0.69
STX1A-205ENST00000461441 TARBP1Q13395 1621 aaKnown RBP19.3■□□□□ 0.68
STX1A-205ENST00000461441 RAD54L2Q9Y4B4 1467 aa19.28■□□□□ 0.68
STX1A-205ENST00000461441 SOGA1O94964 1423 aa19.28■□□□□ 0.68
STX1A-205ENST00000461441 WDR97A6NE52 1622 aa19.28■□□□□ 0.68
STX1A-205ENST00000461441 ABCA10Q8WWZ4 1543 aa19.25■□□□□ 0.67
STX1A-205ENST00000461441 IFT140Q96RY7 1462 aa19.23■□□□□ 0.67
STX1A-205ENST00000461441 RUSC2Q8N2Y8 1516 aa19.21■□□□□ 0.67
STX1A-205ENST00000461441 ABCA5Q8WWZ7 1642 aa19.15■□□□□ 0.66
STX1A-205ENST00000461441 EEA1Q15075 1411 aa19.14■□□□□ 0.65
STX1A-205ENST00000461441 KIF27Q86VH2 1401 aa19.14■□□□□ 0.65
STX1A-205ENST00000461441 ZNF608Q9ULD9 1512 aaPredicted RBP19.13■□□□□ 0.65
STX1A-205ENST00000461441 TDRD9Q8NDG6 1382 aaKnown RBP19.11■□□□□ 0.65
STX1A-205ENST00000461441 AQRO60306 1485 aaKnown RBP eCLIP19.08■□□□□ 0.64
STX1A-205ENST00000461441 GAPVD1Q14C86 1478 aa19.07■□□□□ 0.64
STX1A-205ENST00000461441 EIF4G3O43432 1585 aaKnown RBP19.06■□□□□ 0.64
STX1A-205ENST00000461441 IGF1RP08069 1367 aa19.06■□□□□ 0.64
STX1A-205ENST00000461441 CSRNP3Q8WYN3 585 aa19.05■□□□□ 0.64
STX1A-205ENST00000461441 FAM9AQ8IZU1 332 aaPredicted RBP19.04■□□□□ 0.64
STX1A-205ENST00000461441 PBRM1Q86U86 1689 aa19.03■□□□□ 0.64
STX1A-205ENST00000461441 ERICH3Q5RHP9 1530 aa19.02■□□□□ 0.64
STX1A-205ENST00000461441 GRIN2BQ13224 1484 aa18.99■□□□□ 0.63
STX1A-205ENST00000461441 PRXQ9BXM0 1461 aa18.97■□□□□ 0.63
STX1A-205ENST00000461441 CUL7Q14999 1698 aa18.95■□□□□ 0.62
STX1A-205ENST00000461441 KIF21BO75037 1637 aa18.95■□□□□ 0.62
STX1A-205ENST00000461441 CARMIL1Q5VZK9 1371 aa18.91■□□□□ 0.62
STX1A-205ENST00000461441 ADAMTS12P58397 1594 aa18.9■□□□□ 0.62
STX1A-205ENST00000461441 MAGI1Q96QZ7 1491 aaPredicted RBP18.9■□□□□ 0.62
STX1A-205ENST00000461441 SNAPC4Q5SXM2 1469 aa18.89■□□□□ 0.61
STX1A-205ENST00000461441 FHAD1B1AJZ9 1412 aa18.87■□□□□ 0.61
STX1A-205ENST00000461441 RAPGEF2Q9Y4G8 1499 aa18.86■□□□□ 0.61
STX1A-205ENST00000461441 LOC105371045A0A1W2PR82 267 aa18.84■□□□□ 0.61
STX1A-205ENST00000461441 GOLGA3Q08378 1498 aa18.83■□□□□ 0.6
STX1A-205ENST00000461441 SYNJ2O15056 1496 aa18.82■□□□□ 0.6
STX1A-205ENST00000461441 GRIN2AQ12879 1464 aa18.77■□□□□ 0.59
STX1A-205ENST00000461441 CHD1O14646 1710 aa18.74■□□□□ 0.59
STX1A-205ENST00000461441 TNIKQ9UKE5 1360 aa18.72■□□□□ 0.59
STX1A-205ENST00000461441 EHMT2Q96KQ7 1210 aa18.72■□□□□ 0.59
STX1A-205ENST00000461441 CHMP7Q8WUX9 453 aaPredicted RBP18.71■□□□□ 0.59
STX1A-205ENST00000461441 CTTNBP2Q8WZ74 1663 aa18.69■□□□□ 0.58
STX1A-205ENST00000461441 NUP160Q12769 1436 aa18.68■□□□□ 0.58
STX1A-205ENST00000461441 UBTFP17480 764 aaKnown RBP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms