RNA–Protein interactions for RNA: ENST00000461162.5

NINJ1-202, Transcript of ninjurin 1, humanhuman

TSL 2

Gene NINJ1, Length 861 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NINJ1-202ENST00000461162 NISCHQ9Y2I1 1504 aa33.38■■■□□ 2.93
NINJ1-202ENST00000461162 CCDC180Q9P1Z9 1646 aa29.58■■■□□ 2.33
NINJ1-202ENST00000461162 ABCC9O60706 1549 aa28.88■■■□□ 2.21
NINJ1-202ENST00000461162 NACADO15069 1562 aa27.84■■■□□ 2.05
NINJ1-202ENST00000461162 ZCCHC6Q5VYS8 1495 aaKnown RBP27.81■■■□□ 2.04
NINJ1-202ENST00000461162 RB1CC1Q8TDY2 1594 aa27.81■■■□□ 2.04
NINJ1-202ENST00000461162 MYO15BQ96JP2 1530 aa27.78■■■□□ 2.04
NINJ1-202ENST00000461162 DCAF8L2P0C7V8 631 aa27.69■■■□□ 2.02
NINJ1-202ENST00000461162 DCAF1Q9Y4B6 1507 aa27.67■■■□□ 2.02
NINJ1-202ENST00000461162 UNC13AQ9UPW8 1703 aa27.16■■□□□ 1.94
NINJ1-202ENST00000461162 BICRAQ9NZM4 1560 aa27.08■■□□□ 1.93
NINJ1-202ENST00000461162 PABPN1Q86U42 306 aaKnown RBP eCLIP27.02■■□□□ 1.92
NINJ1-202ENST00000461162 SCRIBQ14160 1630 aa26.94■■□□□ 1.9
NINJ1-202ENST00000461162 DNAJC5BQ9UF47 199 aa26.79■■□□□ 1.88
NINJ1-202ENST00000461162 SHROOM4Q9ULL8 1493 aa26.76■■□□□ 1.87
NINJ1-202ENST00000461162 EIF4G1Q04637 1599 aaKnown RBP26.29■■□□□ 1.8
NINJ1-202ENST00000461162 CC2D2AQ9P2K1 1620 aa26.15■■□□□ 1.78
NINJ1-202ENST00000461162 CECR2Q9BXF3 1484 aa26.01■■□□□ 1.75
NINJ1-202ENST00000461162 SMARCA4P51532 1647 aa25.84■■□□□ 1.73
NINJ1-202ENST00000461162 BAZ1AQ9NRL2 1556 aaPredicted RBP25.81■■□□□ 1.72
NINJ1-202ENST00000461162 NCAPD3P42695 1498 aa25.76■■□□□ 1.71
NINJ1-202ENST00000461162 ATAD2BQ9ULI0 1458 aa25.74■■□□□ 1.71
NINJ1-202ENST00000461162 MROH2BQ7Z745 1585 aa25.72■■□□□ 1.71
NINJ1-202ENST00000461162 PEG3Q9GZU2 1588 aa25.67■■□□□ 1.7
NINJ1-202ENST00000461162 SMARCA2P51531 1590 aa25.65■■□□□ 1.7
NINJ1-202ENST00000461162 HMGXB3Q12766 1538 aa25.57■■□□□ 1.68
NINJ1-202ENST00000461162 RSF1Q96T23 1441 aaPredicted RBP25.47■■□□□ 1.67
NINJ1-202ENST00000461162 BAZ1BQ9UIG0 1483 aaKnown RBP25.45■■□□□ 1.66
NINJ1-202ENST00000461162 WIZO95785 1651 aa25.38■■□□□ 1.65
NINJ1-202ENST00000461162 TOP2AP11388 1531 aaKnown RBP25.13■■□□□ 1.61
NINJ1-202ENST00000461162 NESP48681 1621 aa25.05■■□□□ 1.6
NINJ1-202ENST00000461162 LAMC3Q9Y6N6 1575 aa24.97■■□□□ 1.59
NINJ1-202ENST00000461162 CADPSQ9ULU8 1353 aa24.97■■□□□ 1.59
NINJ1-202ENST00000461162 CCDC88BA6NC98 1476 aa24.89■■□□□ 1.57
NINJ1-202ENST00000461162 CFTRP13569 1480 aa24.85■■□□□ 1.57
NINJ1-202ENST00000461162 ERCC6Q03468 1493 aa24.82■■□□□ 1.56
NINJ1-202ENST00000461162 PDS5BQ9NTI5 1447 aa24.81■■□□□ 1.56
NINJ1-202ENST00000461162 SUPT5HO00267 1087 aaKnown RBP24.71■■□□□ 1.55
NINJ1-202ENST00000461162 KIF21AQ7Z4S6 1674 aa24.68■■□□□ 1.54
NINJ1-202ENST00000461162 THOC2Q8NI27 1593 aaKnown RBP24.65■■□□□ 1.54
NINJ1-202ENST00000461162 CUX2O14529 1486 aa24.64■■□□□ 1.54
NINJ1-202ENST00000461162 FANCD2Q9BXW9 1451 aa24.64■■□□□ 1.53
NINJ1-202ENST00000461162 CEP164Q9UPV0 1460 aa24.56■■□□□ 1.52
NINJ1-202ENST00000461162 MRC2Q9UBG0 1479 aa24.54■■□□□ 1.52
NINJ1-202ENST00000461162 PRDM2Q13029 1718 aa24.51■■□□□ 1.51
NINJ1-202ENST00000461162 WDR62O43379 1518 aa24.5■■□□□ 1.51
NINJ1-202ENST00000461162 URB2Q14146 1524 aaKnown RBP24.42■■□□□ 1.5
NINJ1-202ENST00000461162 DNAJC5Q9H3Z4 198 aa24.36■■□□□ 1.49
NINJ1-202ENST00000461162 TOPBP1Q92547 1522 aa24.26■■□□□ 1.47
NINJ1-202ENST00000461162 ABCC8Q09428 1581 aa24.25■■□□□ 1.47
NINJ1-202ENST00000461162 DNMBPQ6XZF7 1577 aa24.21■■□□□ 1.47
NINJ1-202ENST00000461162 CUX1P39880 1505 aa24.11■■□□□ 1.45
NINJ1-202ENST00000461162 IFT140Q96RY7 1462 aa24.08■■□□□ 1.45
NINJ1-202ENST00000461162 POLA1P09884 1462 aaPredicted RBP24.07■■□□□ 1.44
NINJ1-202ENST00000461162 TARBP1Q13395 1621 aaKnown RBP24.02■■□□□ 1.44
NINJ1-202ENST00000461162 ZNF608Q9ULD9 1512 aaPredicted RBP24■■□□□ 1.43
NINJ1-202ENST00000461162 FGD5Q6ZNL6 1462 aa23.99■■□□□ 1.43
NINJ1-202ENST00000461162 RAD54L2Q9Y4B4 1467 aa23.95■■□□□ 1.42
NINJ1-202ENST00000461162 SOGA1O94964 1423 aa23.95■■□□□ 1.42
NINJ1-202ENST00000461162 WRNQ14191 1432 aaPredicted RBP eCLIP23.94■■□□□ 1.42
NINJ1-202ENST00000461162 TOP2BQ02880 1626 aa23.9■■□□□ 1.42
NINJ1-202ENST00000461162 SYNJ1O43426 1573 aa23.89■■□□□ 1.41
NINJ1-202ENST00000461162 BIVM-ERCC5R4GMW8 1640 aa23.88■■□□□ 1.41
NINJ1-202ENST00000461162 AQRO60306 1485 aaKnown RBP eCLIP23.86■■□□□ 1.418e-7■□□□□ 9.1
NINJ1-202ENST00000461162 EIF4G3O43432 1585 aaKnown RBP23.84■■□□□ 1.41
NINJ1-202ENST00000461162 TDRD9Q8NDG6 1382 aaKnown RBP23.81■■□□□ 1.4
NINJ1-202ENST00000461162 ABCA10Q8WWZ4 1543 aa23.8■■□□□ 1.4
NINJ1-202ENST00000461162 WDR97A6NE52 1622 aa23.79■■□□□ 1.4
NINJ1-202ENST00000461162 ABCA5Q8WWZ7 1642 aa23.67■■□□□ 1.38
NINJ1-202ENST00000461162 GAPVD1Q14C86 1478 aa23.67■■□□□ 1.38
NINJ1-202ENST00000461162 GRIN2BQ13224 1484 aa23.66■■□□□ 1.38
NINJ1-202ENST00000461162 OSCARQ8IYS5 282 aa23.63■■□□□ 1.37
NINJ1-202ENST00000461162 SNAPC4Q5SXM2 1469 aa23.6■■□□□ 1.37
NINJ1-202ENST00000461162 MAGI1Q96QZ7 1491 aaPredicted RBP23.6■■□□□ 1.37
NINJ1-202ENST00000461162 PBRM1Q86U86 1689 aa23.53■■□□□ 1.36
NINJ1-202ENST00000461162 SYNJ2O15056 1496 aa23.51■■□□□ 1.35
NINJ1-202ENST00000461162 ERICH3Q5RHP9 1530 aa23.49■■□□□ 1.35
NINJ1-202ENST00000461162 CHD1O14646 1710 aa23.48■■□□□ 1.35
NINJ1-202ENST00000461162 FBLN2P98095 1184 aa23.44■■□□□ 1.34
NINJ1-202ENST00000461162 CHMP7Q8WUX9 453 aaPredicted RBP23.44■■□□□ 1.34
NINJ1-202ENST00000461162 IGF1RP08069 1367 aa23.43■■□□□ 1.34
NINJ1-202ENST00000461162 KIF27Q86VH2 1401 aa23.42■■□□□ 1.34
NINJ1-202ENST00000461162 ADAMTS12P58397 1594 aa23.41■■□□□ 1.34
NINJ1-202ENST00000461162 FHAD1B1AJZ9 1412 aa23.41■■□□□ 1.34
NINJ1-202ENST00000461162 TRIM41Q8WV44 630 aa23.36■■□□□ 1.33
NINJ1-202ENST00000461162 GRIN2AQ12879 1464 aa23.36■■□□□ 1.33
NINJ1-202ENST00000461162 CLASP1Q7Z460 1538 aa23.35■■□□□ 1.33
NINJ1-202ENST00000461162 NUP160Q12769 1436 aa23.31■■□□□ 1.32
NINJ1-202ENST00000461162 RUSC2Q8N2Y8 1516 aa23.29■■□□□ 1.32
NINJ1-202ENST00000461162 ARHGEF11O15085 1522 aa23.24■■□□□ 1.31
NINJ1-202ENST00000461162 CEP170Q5SW79 1584 aa23.24■■□□□ 1.31
NINJ1-202ENST00000461162 CUL7Q14999 1698 aa23.22■■□□□ 1.31
NINJ1-202ENST00000461162 CARMIL1Q5VZK9 1371 aa23.21■■□□□ 1.31
NINJ1-202ENST00000461162 RIMBP3CA6NJZ7 1639 aa23.21■■□□□ 1.31
NINJ1-202ENST00000461162 RIMBP3BA6NNM3 1639 aa23.21■■□□□ 1.31
NINJ1-202ENST00000461162 RIMBP3Q9UFD9 1639 aa23.21■■□□□ 1.31
NINJ1-202ENST00000461162 CHIC1Q5VXU3 224 aa23.2■■□□□ 1.3
NINJ1-202ENST00000461162 SHROOM2Q13796 1616 aa23.1■■□□□ 1.29
NINJ1-202ENST00000461162 ARAP1Q96P48 1450 aa23.08■■□□□ 1.29
NINJ1-202ENST00000461162 KIAA0586Q9BVV6 1533 aa23.08■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms