RNA–Protein interactions for RNA: ENST00000461041.1

SNAPC3-204, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 2

Gene SNAPC3, Length 403 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-204ENST00000461041 NISCHQ9Y2I1 1504 aa48.64■■■■■ 5.38
SNAPC3-204ENST00000461041 CCDC180Q9P1Z9 1646 aa43.22■■■■■ 4.51
SNAPC3-204ENST00000461041 ABCC9O60706 1549 aa42.24■■■■■ 4.35
SNAPC3-204ENST00000461041 RB1CC1Q8TDY2 1594 aa40.65■■■■■ 4.1
SNAPC3-204ENST00000461041 NACADO15069 1562 aa40.61■■■■■ 4.09
SNAPC3-204ENST00000461041 DCAF8L2P0C7V8 631 aa40.61■■■■■ 4.09
SNAPC3-204ENST00000461041 ZCCHC6Q5VYS8 1495 aaKnown RBP40.53■■■■■ 4.08
SNAPC3-204ENST00000461041 MYO15BQ96JP2 1530 aa40.38■■■■■ 4.06
SNAPC3-204ENST00000461041 DCAF1Q9Y4B6 1507 aa40.24■■■■■ 4.03
SNAPC3-204ENST00000461041 UNC13AQ9UPW8 1703 aa39.74■■■■□ 3.95
SNAPC3-204ENST00000461041 PABPN1Q86U42 306 aaKnown RBP eCLIP39.48■■■■□ 3.91
SNAPC3-204ENST00000461041 SCRIBQ14160 1630 aa39.45■■■■□ 3.91
SNAPC3-204ENST00000461041 BICRAQ9NZM4 1560 aa39.43■■■■□ 3.9
SNAPC3-204ENST00000461041 SHROOM4Q9ULL8 1493 aa38.99■■■■□ 3.83
SNAPC3-204ENST00000461041 DNAJC5BQ9UF47 199 aa38.71■■■■□ 3.79
SNAPC3-204ENST00000461041 EIF4G1Q04637 1599 aaKnown RBP38.37■■■■□ 3.73
SNAPC3-204ENST00000461041 CC2D2AQ9P2K1 1620 aa38.21■■■■□ 3.71
SNAPC3-204ENST00000461041 CECR2Q9BXF3 1484 aa37.94■■■■□ 3.66
SNAPC3-204ENST00000461041 SMARCA4P51532 1647 aa37.74■■■■□ 3.63
SNAPC3-204ENST00000461041 BAZ1AQ9NRL2 1556 aaPredicted RBP37.69■■■■□ 3.62
SNAPC3-204ENST00000461041 ATAD2BQ9ULI0 1458 aa37.51■■■■□ 3.59
SNAPC3-204ENST00000461041 MROH2BQ7Z745 1585 aa37.5■■■■□ 3.59
SNAPC3-204ENST00000461041 NCAPD3P42695 1498 aa37.47■■■■□ 3.59
SNAPC3-204ENST00000461041 SMARCA2P51531 1590 aa37.46■■■■□ 3.59
SNAPC3-204ENST00000461041 PEG3Q9GZU2 1588 aa37.36■■■■□ 3.57
SNAPC3-204ENST00000461041 HMGXB3Q12766 1538 aa37.3■■■■□ 3.56
SNAPC3-204ENST00000461041 BAZ1BQ9UIG0 1483 aaKnown RBP37.2■■■■□ 3.55
SNAPC3-204ENST00000461041 WIZO95785 1651 aa37.1■■■■□ 3.53
SNAPC3-204ENST00000461041 RSF1Q96T23 1441 aaPredicted RBP37.08■■■■□ 3.53
SNAPC3-204ENST00000461041 TOP2AP11388 1531 aaKnown RBP36.69■■■■□ 3.46
SNAPC3-204ENST00000461041 NESP48681 1621 aa36.57■■■■□ 3.44
SNAPC3-204ENST00000461041 LAMC3Q9Y6N6 1575 aa36.48■■■■□ 3.43
SNAPC3-204ENST00000461041 ERCC6Q03468 1493 aa36.39■■■■□ 3.42
SNAPC3-204ENST00000461041 CADPSQ9ULU8 1353 aa36.39■■■■□ 3.42
SNAPC3-204ENST00000461041 CCDC88BA6NC98 1476 aa36.27■■■■□ 3.4
SNAPC3-204ENST00000461041 PDS5BQ9NTI5 1447 aa36.22■■■■□ 3.39
SNAPC3-204ENST00000461041 SUPT5HO00267 1087 aaKnown RBP36.19■■■■□ 3.38
SNAPC3-204ENST00000461041 CFTRP13569 1480 aa36.18■■■■□ 3.38
SNAPC3-204ENST00000461041 KIF21AQ7Z4S6 1674 aa36.14■■■■□ 3.38
SNAPC3-204ENST00000461041 THOC2Q8NI27 1593 aaKnown RBP36.01■■■■□ 3.35
SNAPC3-204ENST00000461041 CUX2O14529 1486 aa35.99■■■■□ 3.35
SNAPC3-204ENST00000461041 FANCD2Q9BXW9 1451 aa35.98■■■■□ 3.35
SNAPC3-204ENST00000461041 CEP164Q9UPV0 1460 aa35.92■■■■□ 3.34
SNAPC3-204ENST00000461041 PRDM2Q13029 1718 aa35.92■■■■□ 3.34
SNAPC3-204ENST00000461041 MRC2Q9UBG0 1479 aa35.86■■■■□ 3.33
SNAPC3-204ENST00000461041 WDR62O43379 1518 aa35.74■■■■□ 3.31
SNAPC3-204ENST00000461041 URB2Q14146 1524 aaKnown RBP35.62■■■■□ 3.29
SNAPC3-204ENST00000461041 TOPBP1Q92547 1522 aa35.42■■■■□ 3.26
SNAPC3-204ENST00000461041 ABCC8Q09428 1581 aa35.39■■■■□ 3.26
SNAPC3-204ENST00000461041 DNMBPQ6XZF7 1577 aa35.38■■■■□ 3.25
SNAPC3-204ENST00000461041 CUX1P39880 1505 aa35.17■■■■□ 3.22
SNAPC3-204ENST00000461041 IFT140Q96RY7 1462 aa35.16■■■■□ 3.22
SNAPC3-204ENST00000461041 POLA1P09884 1462 aaPredicted RBP35.11■■■■□ 3.21
SNAPC3-204ENST00000461041 FGD5Q6ZNL6 1462 aa35.04■■■■□ 3.2
SNAPC3-204ENST00000461041 TARBP1Q13395 1621 aaKnown RBP35.03■■■■□ 3.2
SNAPC3-204ENST00000461041 ZNF608Q9ULD9 1512 aaPredicted RBP35.01■■■■□ 3.2
SNAPC3-204ENST00000461041 SOGA1O94964 1423 aa34.97■■■■□ 3.19
SNAPC3-204ENST00000461041 RAD54L2Q9Y4B4 1467 aa34.97■■■■□ 3.19
SNAPC3-204ENST00000461041 WRNQ14191 1432 aaPredicted RBP eCLIP34.96■■■■□ 3.19
SNAPC3-204ENST00000461041 TOP2BQ02880 1626 aa34.88■■■■□ 3.17
SNAPC3-204ENST00000461041 BIVM-ERCC5R4GMW8 1640 aa34.88■■■■□ 3.17
SNAPC3-204ENST00000461041 SYNJ1O43426 1573 aa34.88■■■■□ 3.17
SNAPC3-204ENST00000461041 EIF4G3O43432 1585 aaKnown RBP34.87■■■■□ 3.17
SNAPC3-204ENST00000461041 AQRO60306 1485 aaKnown RBP eCLIP34.82■■■■□ 3.161e-7■■□□□ 13.1
SNAPC3-204ENST00000461041 DNAJC5Q9H3Z4 198 aa34.8■■■■□ 3.16
SNAPC3-204ENST00000461041 TDRD9Q8NDG6 1382 aaKnown RBP34.76■■■■□ 3.16
SNAPC3-204ENST00000461041 WDR97A6NE52 1622 aa34.76■■■■□ 3.15
SNAPC3-204ENST00000461041 ABCA10Q8WWZ4 1543 aa34.7■■■■□ 3.14
SNAPC3-204ENST00000461041 GAPVD1Q14C86 1478 aa34.57■■■■□ 3.12
SNAPC3-204ENST00000461041 ABCA5Q8WWZ7 1642 aa34.56■■■■□ 3.12
SNAPC3-204ENST00000461041 GRIN2BQ13224 1484 aa34.55■■■■□ 3.12
SNAPC3-204ENST00000461041 OSCARQ8IYS5 282 aa34.5■■■■□ 3.11
SNAPC3-204ENST00000461041 SNAPC4Q5SXM2 1469 aa34.5■■■■□ 3.11
SNAPC3-204ENST00000461041 PBRM1Q86U86 1689 aa34.5■■■■□ 3.11
SNAPC3-204ENST00000461041 MAGI1Q96QZ7 1491 aaPredicted RBP34.45■■■■□ 3.1
SNAPC3-204ENST00000461041 CHD1O14646 1710 aa34.43■■■■□ 3.1
SNAPC3-204ENST00000461041 FBLN2P98095 1184 aa34.39■■■■□ 3.1
SNAPC3-204ENST00000461041 SYNJ2O15056 1496 aa34.32■■■■□ 3.08
SNAPC3-204ENST00000461041 CHMP7Q8WUX9 453 aaPredicted RBP34.3■■■■□ 3.08
SNAPC3-204ENST00000461041 ERICH3Q5RHP9 1530 aa34.29■■■■□ 3.08
SNAPC3-204ENST00000461041 ADAMTS12P58397 1594 aa34.23■■■■□ 3.07
SNAPC3-204ENST00000461041 KIF27Q86VH2 1401 aa34.21■■■■□ 3.07
SNAPC3-204ENST00000461041 TRIM41Q8WV44 630 aa34.17■■■■□ 3.06
SNAPC3-204ENST00000461041 FHAD1B1AJZ9 1412 aa34.16■■■■□ 3.06
SNAPC3-204ENST00000461041 GRIN2AQ12879 1464 aa34.11■■■■□ 3.05
SNAPC3-204ENST00000461041 IGF1RP08069 1367 aa34.08■■■■□ 3.05
SNAPC3-204ENST00000461041 CLASP1Q7Z460 1538 aa34.06■■■■□ 3.04
SNAPC3-204ENST00000461041 CUL7Q14999 1698 aa33.99■■■■□ 3.03
SNAPC3-204ENST00000461041 RIMBP3CA6NJZ7 1639 aa33.96■■■■□ 3.03
SNAPC3-204ENST00000461041 RIMBP3BA6NNM3 1639 aa33.96■■■■□ 3.03
SNAPC3-204ENST00000461041 RIMBP3Q9UFD9 1639 aa33.96■■■■□ 3.03
SNAPC3-204ENST00000461041 NUP160Q12769 1436 aa33.96■■■■□ 3.03
SNAPC3-204ENST00000461041 ARHGEF11O15085 1522 aa33.95■■■■□ 3.03
SNAPC3-204ENST00000461041 RUSC2Q8N2Y8 1516 aa33.95■■■■□ 3.03
SNAPC3-204ENST00000461041 CEP170Q5SW79 1584 aa33.94■■■■□ 3.02
SNAPC3-204ENST00000461041 CARMIL1Q5VZK9 1371 aa33.87■■■■□ 3.01
SNAPC3-204ENST00000461041 CHIC1Q5VXU3 224 aa33.81■■■■□ 3
SNAPC3-204ENST00000461041 SHROOM2Q13796 1616 aa33.7■■■□□ 2.99
SNAPC3-204ENST00000461041 ARAP1Q96P48 1450 aa33.69■■■□□ 2.98
SNAPC3-204ENST00000461041 RAPGEF2Q9Y4G8 1499 aa33.69■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms