RNA–Protein interactions for RNA: ENST00000460992.1

PTPN18-206, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 398 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-206ENST00000460992 NISCHQ9Y2I1 1504 aa18.33■□□□□ 0.52
PTPN18-206ENST00000460992 CCDC180Q9P1Z9 1646 aa16.39■□□□□ 0.21
PTPN18-206ENST00000460992 ABCC9O60706 1549 aa15.89■□□□□ 0.13
PTPN18-206ENST00000460992 ZCCHC6Q5VYS8 1495 aaKnown RBP15.35■□□□□ 0.05
PTPN18-206ENST00000460992 RB1CC1Q8TDY2 1594 aa15.32■□□□□ 0.04
PTPN18-206ENST00000460992 NACADO15069 1562 aa15.29■□□□□ 0.04
PTPN18-206ENST00000460992 MYO15BQ96JP2 1530 aa15.19■□□□□ 0.02
PTPN18-206ENST00000460992 DCAF1Q9Y4B6 1507 aa15.17■□□□□ 0.02
PTPN18-206ENST00000460992 CHIC1Q5VXU3 224 aa15.13■□□□□ 0.01
PTPN18-206ENST00000460992 UNC13AQ9UPW8 1703 aa15.12■□□□□ 0.01
PTPN18-206ENST00000460992 DCAF8L2P0C7V8 631 aa15.1■□□□□ 0.01
PTPN18-206ENST00000460992 AEBP2Q6ZN18 517 aaPredicted RBP14.98□□□□□ -0.01
PTPN18-206ENST00000460992 SCRIBQ14160 1630 aa14.97□□□□□ -0.01
PTPN18-206ENST00000460992 BICRAQ9NZM4 1560 aa14.89□□□□□ -0.03
PTPN18-206ENST00000460992 PABPN1Q86U42 306 aaKnown RBP eCLIP14.74□□□□□ -0.05
PTPN18-206ENST00000460992 SHROOM4Q9ULL8 1493 aa14.7□□□□□ -0.06
PTPN18-206ENST00000460992 EIF4G1Q04637 1599 aaKnown RBP14.49□□□□□ -0.09
PTPN18-206ENST00000460992 CC2D2AQ9P2K1 1620 aa14.42□□□□□ -0.1
PTPN18-206ENST00000460992 DNAJC5BQ9UF47 199 aa14.39□□□□□ -0.11
PTPN18-206ENST00000460992 SMARCA4P51532 1647 aa14.29□□□□□ -0.12
PTPN18-206ENST00000460992 CECR2Q9BXF3 1484 aa14.28□□□□□ -0.12
PTPN18-206ENST00000460992 BAZ1AQ9NRL2 1556 aaPredicted RBP14.23□□□□□ -0.13
PTPN18-206ENST00000460992 MROH2BQ7Z745 1585 aa14.15□□□□□ -0.14
PTPN18-206ENST00000460992 SMARCA2P51531 1590 aa14.12□□□□□ -0.15
PTPN18-206ENST00000460992 PEG3Q9GZU2 1588 aa14.12□□□□□ -0.15
PTPN18-206ENST00000460992 ATAD2BQ9ULI0 1458 aa14.11□□□□□ -0.15
PTPN18-206ENST00000460992 HMGXB3Q12766 1538 aa14.1□□□□□ -0.15
PTPN18-206ENST00000460992 WIZO95785 1651 aa14.05□□□□□ -0.16
PTPN18-206ENST00000460992 NCAPD3P42695 1498 aa14.04□□□□□ -0.16
PTPN18-206ENST00000460992 BAZ1BQ9UIG0 1483 aaKnown RBP14.03□□□□□ -0.16
PTPN18-206ENST00000460992 RSF1Q96T23 1441 aaPredicted RBP13.94□□□□□ -0.18
PTPN18-206ENST00000460992 TOP2AP11388 1531 aaKnown RBP13.9□□□□□ -0.19
PTPN18-206ENST00000460992 NESP48681 1621 aa13.78□□□□□ -0.2
PTPN18-206ENST00000460992 LAMC3Q9Y6N6 1575 aa13.75□□□□□ -0.21
PTPN18-206ENST00000460992 KIF21AQ7Z4S6 1674 aa13.72□□□□□ -0.21
PTPN18-206ENST00000460992 PRDM2Q13029 1718 aa13.71□□□□□ -0.21
PTPN18-206ENST00000460992 ERCC6Q03468 1493 aa13.68□□□□□ -0.22
PTPN18-206ENST00000460992 THOC2Q8NI27 1593 aaKnown RBP13.66□□□□□ -0.22
PTPN18-206ENST00000460992 CCDC88BA6NC98 1476 aa13.64□□□□□ -0.23
PTPN18-206ENST00000460992 CADPSQ9ULU8 1353 aa13.61□□□□□ -0.23
PTPN18-206ENST00000460992 CFTRP13569 1480 aa13.6□□□□□ -0.23
PTPN18-206ENST00000460992 PDS5BQ9NTI5 1447 aa13.56□□□□□ -0.24
PTPN18-206ENST00000460992 SUPT5HO00267 1087 aaKnown RBP13.55□□□□□ -0.24
PTPN18-206ENST00000460992 CEP164Q9UPV0 1460 aa13.55□□□□□ -0.24
PTPN18-206ENST00000460992 FANCD2Q9BXW9 1451 aa13.54□□□□□ -0.24
PTPN18-206ENST00000460992 WDR62O43379 1518 aa13.51□□□□□ -0.25
PTPN18-206ENST00000460992 CUX2O14529 1486 aa13.51□□□□□ -0.25
PTPN18-206ENST00000460992 MRC2Q9UBG0 1479 aa13.51□□□□□ -0.25
PTPN18-206ENST00000460992 URB2Q14146 1524 aaKnown RBP13.43□□□□□ -0.26
PTPN18-206ENST00000460992 DNMBPQ6XZF7 1577 aa13.37□□□□□ -0.27
PTPN18-206ENST00000460992 TOPBP1Q92547 1522 aa13.35□□□□□ -0.27
PTPN18-206ENST00000460992 CUX1P39880 1505 aa13.29□□□□□ -0.28
PTPN18-206ENST00000460992 ABCC8Q09428 1581 aa13.27□□□□□ -0.29
PTPN18-206ENST00000460992 POLA1P09884 1462 aaPredicted RBP13.25□□□□□ -0.29
PTPN18-206ENST00000460992 WDR97A6NE52 1622 aa13.24□□□□□ -0.29
PTPN18-206ENST00000460992 BIVM-ERCC5R4GMW8 1640 aa13.24□□□□□ -0.29
PTPN18-206ENST00000460992 SYNJ1O43426 1573 aa13.24□□□□□ -0.29
PTPN18-206ENST00000460992 EIF4G3O43432 1585 aaKnown RBP13.24□□□□□ -0.29
PTPN18-206ENST00000460992 TARBP1Q13395 1621 aaKnown RBP13.24□□□□□ -0.29
PTPN18-206ENST00000460992 FGD5Q6ZNL6 1462 aa13.23□□□□□ -0.29
PTPN18-206ENST00000460992 PHF23Q9BUL5 403 aaPredicted RBP13.23□□□□□ -0.29
PTPN18-206ENST00000460992 IFT140Q96RY7 1462 aa13.22□□□□□ -0.29
PTPN18-206ENST00000460992 TOP2BQ02880 1626 aa13.2□□□□□ -0.3
PTPN18-206ENST00000460992 ZNF608Q9ULD9 1512 aaPredicted RBP13.19□□□□□ -0.3
PTPN18-206ENST00000460992 WRNQ14191 1432 aaPredicted RBP eCLIP13.17□□□□□ -0.3
PTPN18-206ENST00000460992 RAD54L2Q9Y4B4 1467 aa13.16□□□□□ -0.3
PTPN18-206ENST00000460992 PBRM1Q86U86 1689 aa13.14□□□□□ -0.31
PTPN18-206ENST00000460992 ABCA5Q8WWZ7 1642 aa13.12□□□□□ -0.31
PTPN18-206ENST00000460992 CHD1O14646 1710 aa13.08□□□□□ -0.32
PTPN18-206ENST00000460992 SOGA1O94964 1423 aa13.08□□□□□ -0.32
PTPN18-206ENST00000460992 ABCA10Q8WWZ4 1543 aa13.08□□□□□ -0.32
PTPN18-206ENST00000460992 AQRO60306 1485 aaKnown RBP eCLIP13.06□□□□□ -0.32
PTPN18-206ENST00000460992 SNAPC4Q5SXM2 1469 aa13.03□□□□□ -0.32
PTPN18-206ENST00000460992 TDRD9Q8NDG6 1382 aaKnown RBP13.02□□□□□ -0.33
PTPN18-206ENST00000460992 ADAMTS12P58397 1594 aa13.01□□□□□ -0.33
PTPN18-206ENST00000460992 GAPVD1Q14C86 1478 aa12.99□□□□□ -0.33
PTPN18-206ENST00000460992 GRIN2BQ13224 1484 aa12.98□□□□□ -0.33
PTPN18-206ENST00000460992 MAGI1Q96QZ7 1491 aaPredicted RBP12.97□□□□□ -0.33
PTPN18-206ENST00000460992 ERICH3Q5RHP9 1530 aa12.93□□□□□ -0.34
PTPN18-206ENST00000460992 SYNJ2O15056 1496 aa12.91□□□□□ -0.34
PTPN18-206ENST00000460992 CUL7Q14999 1698 aa12.89□□□□□ -0.35
PTPN18-206ENST00000460992 CLASP1Q7Z460 1538 aa12.88□□□□□ -0.35
PTPN18-206ENST00000460992 SENP3Q9H4L4 574 aaPredicted RBP12.88□□□□□ -0.35
PTPN18-206ENST00000460992 GRIN2AQ12879 1464 aa12.86□□□□□ -0.35
PTPN18-206ENST00000460992 DNAJC5Q9H3Z4 198 aa12.86□□□□□ -0.35
PTPN18-206ENST00000460992 KIF27Q86VH2 1401 aa12.86□□□□□ -0.35
PTPN18-206ENST00000460992 CEP170Q5SW79 1584 aa12.86□□□□□ -0.35
PTPN18-206ENST00000460992 RUSC2Q8N2Y8 1516 aa12.83□□□□□ -0.35
PTPN18-206ENST00000460992 FHAD1B1AJZ9 1412 aa12.83□□□□□ -0.36
PTPN18-206ENST00000460992 RIMBP3CA6NJZ7 1639 aa12.82□□□□□ -0.36
PTPN18-206ENST00000460992 RIMBP3BA6NNM3 1639 aa12.82□□□□□ -0.36
PTPN18-206ENST00000460992 RIMBP3Q9UFD9 1639 aa12.82□□□□□ -0.36
PTPN18-206ENST00000460992 FBLN2P98095 1184 aa12.81□□□□□ -0.36
PTPN18-206ENST00000460992 ARHGEF11O15085 1522 aa12.79□□□□□ -0.36
PTPN18-206ENST00000460992 NUP160Q12769 1436 aa12.79□□□□□ -0.36
PTPN18-206ENST00000460992 OSCARQ8IYS5 282 aa12.78□□□□□ -0.36
PTPN18-206ENST00000460992 CHMP7Q8WUX9 453 aaPredicted RBP12.76□□□□□ -0.37
PTPN18-206ENST00000460992 TRIM41Q8WV44 630 aa12.76□□□□□ -0.37
PTPN18-206ENST00000460992 SHROOM2Q13796 1616 aa12.76□□□□□ -0.37
PTPN18-206ENST00000460992 IGF1RP08069 1367 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms