RNA–Protein interactions for RNA: ENST00000460832.1

SPICE1-202, Transcript of spindle and centriole associated protein 1, humanhuman

TSL 2

Gene SPICE1, Length 979 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPICE1-202ENST00000460832 NISCHQ9Y2I1 1504 aa34.76■■■■□ 3.15
SPICE1-202ENST00000460832 CCDC180Q9P1Z9 1646 aa31.04■■■□□ 2.56
SPICE1-202ENST00000460832 AEBP2Q6ZN18 517 aaPredicted RBP30.93■■■□□ 2.54
SPICE1-202ENST00000460832 ABCC9O60706 1549 aa30.48■■■□□ 2.47
SPICE1-202ENST00000460832 CHIC1Q5VXU3 224 aa29.67■■■□□ 2.34
SPICE1-202ENST00000460832 RB1CC1Q8TDY2 1594 aa29.31■■■□□ 2.28
SPICE1-202ENST00000460832 NACADO15069 1562 aa29.25■■■□□ 2.27
SPICE1-202ENST00000460832 MYO15BQ96JP2 1530 aa29.06■■■□□ 2.24
SPICE1-202ENST00000460832 DCAF8L2P0C7V8 631 aa29■■■□□ 2.23
SPICE1-202ENST00000460832 ZCCHC6Q5VYS8 1495 aaKnown RBP28.91■■■□□ 2.22
SPICE1-202ENST00000460832 DCAF1Q9Y4B6 1507 aa28.83■■■□□ 2.21
SPICE1-202ENST00000460832 UNC13AQ9UPW8 1703 aa28.55■■■□□ 2.16
SPICE1-202ENST00000460832 PABPN1Q86U42 306 aaKnown RBP eCLIP28.41■■■□□ 2.14
SPICE1-202ENST00000460832 BICRAQ9NZM4 1560 aa28.4■■■□□ 2.14
SPICE1-202ENST00000460832 SHROOM4Q9ULL8 1493 aa28.23■■■□□ 2.11
SPICE1-202ENST00000460832 SCRIBQ14160 1630 aa28.2■■■□□ 2.1
SPICE1-202ENST00000460832 DNAJC5BQ9UF47 199 aa28.16■■■□□ 2.1
SPICE1-202ENST00000460832 EIF4G1Q04637 1599 aaKnown RBP27.68■■■□□ 2.02
SPICE1-202ENST00000460832 CC2D2AQ9P2K1 1620 aa27.6■■■□□ 2.01
SPICE1-202ENST00000460832 CECR2Q9BXF3 1484 aa27.47■■□□□ 1.99
SPICE1-202ENST00000460832 SMARCA4P51532 1647 aa27.01■■□□□ 1.91
SPICE1-202ENST00000460832 NCAPD3P42695 1498 aa26.99■■□□□ 1.91
SPICE1-202ENST00000460832 BAZ1AQ9NRL2 1556 aaPredicted RBP26.97■■□□□ 1.91
SPICE1-202ENST00000460832 ATAD2BQ9ULI0 1458 aa26.93■■□□□ 1.9
SPICE1-202ENST00000460832 SMARCA2P51531 1590 aa26.92■■□□□ 1.9
SPICE1-202ENST00000460832 HMGXB3Q12766 1538 aa26.84■■□□□ 1.89
SPICE1-202ENST00000460832 PEG3Q9GZU2 1588 aa26.8■■□□□ 1.88
SPICE1-202ENST00000460832 MROH2BQ7Z745 1585 aa26.74■■□□□ 1.87
SPICE1-202ENST00000460832 BAZ1BQ9UIG0 1483 aaKnown RBP26.69■■□□□ 1.86
SPICE1-202ENST00000460832 WIZO95785 1651 aa26.41■■□□□ 1.82
SPICE1-202ENST00000460832 RSF1Q96T23 1441 aaPredicted RBP26.38■■□□□ 1.81
SPICE1-202ENST00000460832 SENP3Q9H4L4 574 aaPredicted RBP26.36■■□□□ 1.81
SPICE1-202ENST00000460832 ERCC6Q03468 1493 aa26.34■■□□□ 1.81
SPICE1-202ENST00000460832 NESP48681 1621 aa26.31■■□□□ 1.8
SPICE1-202ENST00000460832 LAMC3Q9Y6N6 1575 aa26.3■■□□□ 1.8
SPICE1-202ENST00000460832 CUX2O14529 1486 aa26.22■■□□□ 1.79
SPICE1-202ENST00000460832 TOP2AP11388 1531 aaKnown RBP26.19■■□□□ 1.78
SPICE1-202ENST00000460832 CADPSQ9ULU8 1353 aa26.16■■□□□ 1.78
SPICE1-202ENST00000460832 PDS5BQ9NTI5 1447 aa26.14■■□□□ 1.77
SPICE1-202ENST00000460832 PHF23Q9BUL5 403 aaPredicted RBP26.07■■□□□ 1.76
SPICE1-202ENST00000460832 THOC2Q8NI27 1593 aaKnown RBP26.02■■□□□ 1.76
SPICE1-202ENST00000460832 KIF21AQ7Z4S6 1674 aa25.99■■□□□ 1.75
SPICE1-202ENST00000460832 CFTRP13569 1480 aa25.98■■□□□ 1.75
SPICE1-202ENST00000460832 MRC2Q9UBG0 1479 aa25.86■■□□□ 1.73
SPICE1-202ENST00000460832 CCDC88BA6NC98 1476 aa25.85■■□□□ 1.73
SPICE1-202ENST00000460832 FANCD2Q9BXW9 1451 aa25.85■■□□□ 1.73
SPICE1-202ENST00000460832 CEP164Q9UPV0 1460 aa25.85■■□□□ 1.73
SPICE1-202ENST00000460832 WDR62O43379 1518 aa25.8■■□□□ 1.72
SPICE1-202ENST00000460832 PRDM2Q13029 1718 aa25.71■■□□□ 1.71
SPICE1-202ENST00000460832 DNAJC5Q9H3Z4 198 aa25.63■■□□□ 1.69
SPICE1-202ENST00000460832 URB2Q14146 1524 aaKnown RBP25.58■■□□□ 1.69
SPICE1-202ENST00000460832 ABCC8Q09428 1581 aa25.46■■□□□ 1.67
SPICE1-202ENST00000460832 SUPT5HO00267 1087 aaKnown RBP25.42■■□□□ 1.66
SPICE1-202ENST00000460832 TOPBP1Q92547 1522 aa25.4■■□□□ 1.66
SPICE1-202ENST00000460832 DNMBPQ6XZF7 1577 aa25.37■■□□□ 1.65
SPICE1-202ENST00000460832 IFT140Q96RY7 1462 aa25.34■■□□□ 1.65
SPICE1-202ENST00000460832 ZNF608Q9ULD9 1512 aaPredicted RBP25.17■■□□□ 1.62
SPICE1-202ENST00000460832 POLA1P09884 1462 aaPredicted RBP25.17■■□□□ 1.62
SPICE1-202ENST00000460832 TARBP1Q13395 1621 aaKnown RBP25.15■■□□□ 1.62
SPICE1-202ENST00000460832 CUX1P39880 1505 aa25.11■■□□□ 1.61
SPICE1-202ENST00000460832 EIF4G3O43432 1585 aaKnown RBP25.09■■□□□ 1.61
SPICE1-202ENST00000460832 FGD5Q6ZNL6 1462 aa25.06■■□□□ 1.6
SPICE1-202ENST00000460832 SOGA1O94964 1423 aa25.05■■□□□ 1.6
SPICE1-202ENST00000460832 OSCARQ8IYS5 282 aa25.03■■□□□ 1.6
SPICE1-202ENST00000460832 WDR97A6NE52 1622 aa25.03■■□□□ 1.6
SPICE1-202ENST00000460832 RAD54L2Q9Y4B4 1467 aa25.02■■□□□ 1.6
SPICE1-202ENST00000460832 AQRO60306 1485 aaKnown RBP eCLIP24.99■■□□□ 1.59
SPICE1-202ENST00000460832 TDRD9Q8NDG6 1382 aaKnown RBP24.92■■□□□ 1.58
SPICE1-202ENST00000460832 WRNQ14191 1432 aaPredicted RBP eCLIP24.88■■□□□ 1.57
SPICE1-202ENST00000460832 TOP2BQ02880 1626 aa24.86■■□□□ 1.57
SPICE1-202ENST00000460832 BIVM-ERCC5R4GMW8 1640 aa24.86■■□□□ 1.57
SPICE1-202ENST00000460832 ABCA10Q8WWZ4 1543 aa24.85■■□□□ 1.57
SPICE1-202ENST00000460832 GRIN2BQ13224 1484 aa24.83■■□□□ 1.56
SPICE1-202ENST00000460832 MAGI1Q96QZ7 1491 aaPredicted RBP24.8■■□□□ 1.56
SPICE1-202ENST00000460832 SYNJ1O43426 1573 aa24.8■■□□□ 1.56
SPICE1-202ENST00000460832 SNAPC4Q5SXM2 1469 aa24.78■■□□□ 1.56
SPICE1-202ENST00000460832 CHD1O14646 1710 aa24.78■■□□□ 1.56
SPICE1-202ENST00000460832 GAPVD1Q14C86 1478 aa24.77■■□□□ 1.56
SPICE1-202ENST00000460832 ABCA5Q8WWZ7 1642 aa24.75■■□□□ 1.55
SPICE1-202ENST00000460832 FBLN2P98095 1184 aa24.71■■□□□ 1.55
SPICE1-202ENST00000460832 PBRM1Q86U86 1689 aa24.7■■□□□ 1.54
SPICE1-202ENST00000460832 SYNJ2O15056 1496 aa24.7■■□□□ 1.54
SPICE1-202ENST00000460832 CHMP7Q8WUX9 453 aaPredicted RBP24.66■■□□□ 1.54
SPICE1-202ENST00000460832 RIMBP3CA6NJZ7 1639 aa24.63■■□□□ 1.53
SPICE1-202ENST00000460832 RIMBP3BA6NNM3 1639 aa24.63■■□□□ 1.53
SPICE1-202ENST00000460832 RIMBP3Q9UFD9 1639 aa24.63■■□□□ 1.53
SPICE1-202ENST00000460832 ARHGEF11O15085 1522 aa24.62■■□□□ 1.53
SPICE1-202ENST00000460832 TRIM41Q8WV44 630 aa24.58■■□□□ 1.53
SPICE1-202ENST00000460832 CLASP1Q7Z460 1538 aa24.57■■□□□ 1.52
SPICE1-202ENST00000460832 ERICH3Q5RHP9 1530 aa24.56■■□□□ 1.52
SPICE1-202ENST00000460832 ADAMTS12P58397 1594 aa24.54■■□□□ 1.52
SPICE1-202ENST00000460832 FOXD1Q16676 465 aa24.52■■□□□ 1.52
SPICE1-202ENST00000460832 FHAD1B1AJZ9 1412 aa24.51■■□□□ 1.51
SPICE1-202ENST00000460832 GRIN2AQ12879 1464 aa24.49■■□□□ 1.51
SPICE1-202ENST00000460832 NUP160Q12769 1436 aa24.42■■□□□ 1.5
SPICE1-202ENST00000460832 ARAP1Q96P48 1450 aa24.4■■□□□ 1.5
SPICE1-202ENST00000460832 KIF27Q86VH2 1401 aa24.4■■□□□ 1.5
SPICE1-202ENST00000460832 CYB5RLQ6IPT4 315 aa24.36■■□□□ 1.49
SPICE1-202ENST00000460832 CEP170Q5SW79 1584 aa24.35■■□□□ 1.49
SPICE1-202ENST00000460832 IGF1RP08069 1367 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms