RNA–Protein interactions for RNA: ENST00000460675.5

COMMD6-206, Transcript of COMM domain containing 6, humanhuman

TSL 2

Gene COMMD6, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-206ENST00000460675 NISCHQ9Y2I1 1504 aa26.56■■□□□ 1.84
COMMD6-206ENST00000460675 ABCC9O60706 1549 aa24.32■■□□□ 1.48
COMMD6-206ENST00000460675 CCDC180Q9P1Z9 1646 aa23.92■■□□□ 1.42
COMMD6-206ENST00000460675 DNAJC5BQ9UF47 199 aa23.1■■□□□ 1.29
COMMD6-206ENST00000460675 RB1CC1Q8TDY2 1594 aa22.97■■□□□ 1.27
COMMD6-206ENST00000460675 DCAF8L2P0C7V8 631 aa22.72■■□□□ 1.23
COMMD6-206ENST00000460675 NACADO15069 1562 aa22.72■■□□□ 1.23
COMMD6-206ENST00000460675 PABPN1Q86U42 306 aaKnown RBP eCLIP22.64■■□□□ 1.21
COMMD6-206ENST00000460675 UNC13AQ9UPW8 1703 aa22.42■■□□□ 1.18
COMMD6-206ENST00000460675 BICRAQ9NZM4 1560 aa22.29■■□□□ 1.16
COMMD6-206ENST00000460675 MYO15BQ96JP2 1530 aa22.26■■□□□ 1.15
COMMD6-206ENST00000460675 ZCCHC6Q5VYS8 1495 aaKnown RBP21.92■■□□□ 1.1
COMMD6-206ENST00000460675 CECR2Q9BXF3 1484 aa21.92■■□□□ 1.1
COMMD6-206ENST00000460675 CC2D2AQ9P2K1 1620 aa21.91■■□□□ 1.1
COMMD6-206ENST00000460675 SHROOM4Q9ULL8 1493 aa21.91■■□□□ 1.1
COMMD6-206ENST00000460675 DCAF1Q9Y4B6 1507 aa21.87■■□□□ 1.09
COMMD6-206ENST00000460675 SCRIBQ14160 1630 aa21.84■■□□□ 1.09
COMMD6-206ENST00000460675 EIF4G1Q04637 1599 aaKnown RBP21.78■■□□□ 1.08
COMMD6-206ENST00000460675 AEBP2Q6ZN18 517 aaPredicted RBP21.51■■□□□ 1.03
COMMD6-206ENST00000460675 DNAJC5Q9H3Z4 198 aa21.44■■□□□ 1.02
COMMD6-206ENST00000460675 CUX2O14529 1486 aa21.03■□□□□ 0.96
COMMD6-206ENST00000460675 ERCC6Q03468 1493 aa21.03■□□□□ 0.96
COMMD6-206ENST00000460675 NCAPD3P42695 1498 aa20.99■□□□□ 0.95
COMMD6-206ENST00000460675 ATAD2BQ9ULI0 1458 aa20.89■□□□□ 0.94
COMMD6-206ENST00000460675 SMARCA2P51531 1590 aa20.8■□□□□ 0.92
COMMD6-206ENST00000460675 NESP48681 1621 aa20.79■□□□□ 0.92
COMMD6-206ENST00000460675 SMARCA4P51532 1647 aa20.78■□□□□ 0.92
COMMD6-206ENST00000460675 HMGXB3Q12766 1538 aa20.78■□□□□ 0.92
COMMD6-206ENST00000460675 BAZ1BQ9UIG0 1483 aaKnown RBP20.69■□□□□ 0.9
COMMD6-206ENST00000460675 BAZ1AQ9NRL2 1556 aaPredicted RBP20.63■□□□□ 0.89
COMMD6-206ENST00000460675 THOC2Q8NI27 1593 aaKnown RBP20.58■□□□□ 0.88
COMMD6-206ENST00000460675 LAMC3Q9Y6N6 1575 aa20.55■□□□□ 0.88
COMMD6-206ENST00000460675 PEG3Q9GZU2 1588 aa20.54■□□□□ 0.88
COMMD6-206ENST00000460675 PDS5BQ9NTI5 1447 aa20.49■□□□□ 0.87
COMMD6-206ENST00000460675 KIF21AQ7Z4S6 1674 aa20.48■□□□□ 0.87
COMMD6-206ENST00000460675 MROH2BQ7Z745 1585 aa20.47■□□□□ 0.87
COMMD6-206ENST00000460675 TRIM41Q8WV44 630 aa20.44■□□□□ 0.86
COMMD6-206ENST00000460675 CADPSQ9ULU8 1353 aa20.36■□□□□ 0.85
COMMD6-206ENST00000460675 MRC2Q9UBG0 1479 aa20.31■□□□□ 0.84
COMMD6-206ENST00000460675 WDR62O43379 1518 aa20.24■□□□□ 0.83
COMMD6-206ENST00000460675 WIZO95785 1651 aa20.22■□□□□ 0.83
COMMD6-206ENST00000460675 CEP164Q9UPV0 1460 aa20.18■□□□□ 0.82
COMMD6-206ENST00000460675 FANCD2Q9BXW9 1451 aa20.13■□□□□ 0.81
COMMD6-206ENST00000460675 OSCARQ8IYS5 282 aa20.11■□□□□ 0.81
COMMD6-206ENST00000460675 CHIC1Q5VXU3 224 aa20.1■□□□□ 0.81
COMMD6-206ENST00000460675 CFTRP13569 1480 aa20.04■□□□□ 0.8
COMMD6-206ENST00000460675 URB2Q14146 1524 aaKnown RBP19.97■□□□□ 0.79
COMMD6-206ENST00000460675 RSF1Q96T23 1441 aaPredicted RBP19.94■□□□□ 0.78
COMMD6-206ENST00000460675 TOP2AP11388 1531 aaKnown RBP19.92■□□□□ 0.78
COMMD6-206ENST00000460675 RIMBP3CA6NJZ7 1639 aa19.81■□□□□ 0.76
COMMD6-206ENST00000460675 RIMBP3BA6NNM3 1639 aa19.81■□□□□ 0.76
COMMD6-206ENST00000460675 RIMBP3Q9UFD9 1639 aa19.81■□□□□ 0.76
COMMD6-206ENST00000460675 ZNF608Q9ULD9 1512 aaPredicted RBP19.79■□□□□ 0.76
COMMD6-206ENST00000460675 PRDM2Q13029 1718 aa19.78■□□□□ 0.76
COMMD6-206ENST00000460675 IFT140Q96RY7 1462 aa19.78■□□□□ 0.76
COMMD6-206ENST00000460675 POTEDQ86YR6 584 aa19.76■□□□□ 0.75
COMMD6-206ENST00000460675 CCDC88BA6NC98 1476 aa19.73■□□□□ 0.75
COMMD6-206ENST00000460675 ARHGEF11O15085 1522 aa19.71■□□□□ 0.75
COMMD6-206ENST00000460675 TOPBP1Q92547 1522 aa19.7■□□□□ 0.74
COMMD6-206ENST00000460675 CYB5RLQ6IPT4 315 aa19.68■□□□□ 0.74
COMMD6-206ENST00000460675 ABCC8Q09428 1581 aa19.64■□□□□ 0.73
COMMD6-206ENST00000460675 EIF4G3O43432 1585 aaKnown RBP19.63■□□□□ 0.73
COMMD6-206ENST00000460675 FBLN2P98095 1184 aa19.61■□□□□ 0.73
COMMD6-206ENST00000460675 TRHP20396 242 aaPredicted RBP19.6■□□□□ 0.73
COMMD6-206ENST00000460675 AQRO60306 1485 aaKnown RBP eCLIP19.6■□□□□ 0.73
COMMD6-206ENST00000460675 DNMBPQ6XZF7 1577 aa19.59■□□□□ 0.73
COMMD6-206ENST00000460675 CHD1O14646 1710 aa19.56■□□□□ 0.72
COMMD6-206ENST00000460675 TARBP1Q13395 1621 aaKnown RBP19.53■□□□□ 0.72
COMMD6-206ENST00000460675 ARAP1Q96P48 1450 aa19.5■□□□□ 0.71
COMMD6-206ENST00000460675 POLA1P09884 1462 aaPredicted RBP19.48■□□□□ 0.71
COMMD6-206ENST00000460675 RAD54L2Q9Y4B4 1467 aa19.45■□□□□ 0.7
COMMD6-206ENST00000460675 TDRD9Q8NDG6 1382 aaKnown RBP19.44■□□□□ 0.7
COMMD6-206ENST00000460675 SOGA1O94964 1423 aa19.43■□□□□ 0.7
COMMD6-206ENST00000460675 CHMP7Q8WUX9 453 aaPredicted RBP19.39■□□□□ 0.69
COMMD6-206ENST00000460675 SNAPC4Q5SXM2 1469 aa19.36■□□□□ 0.69
COMMD6-206ENST00000460675 FGD5Q6ZNL6 1462 aa19.33■□□□□ 0.68
COMMD6-206ENST00000460675 CLASP1Q7Z460 1538 aa19.3■□□□□ 0.68
COMMD6-206ENST00000460675 SYNJ1O43426 1573 aa19.3■□□□□ 0.68
COMMD6-206ENST00000460675 WDR97A6NE52 1622 aa19.28■□□□□ 0.68
COMMD6-206ENST00000460675 MAGI1Q96QZ7 1491 aaPredicted RBP19.28■□□□□ 0.68
COMMD6-206ENST00000460675 GRIN2BQ13224 1484 aa19.27■□□□□ 0.67
COMMD6-206ENST00000460675 CUX1P39880 1505 aa19.25■□□□□ 0.67
COMMD6-206ENST00000460675 SYNJ2O15056 1496 aa19.23■□□□□ 0.67
COMMD6-206ENST00000460675 GAPVD1Q14C86 1478 aa19.16■□□□□ 0.66
COMMD6-206ENST00000460675 PBRM1Q86U86 1689 aa19.14■□□□□ 0.66
COMMD6-206ENST00000460675 ABCA10Q8WWZ4 1543 aa19.07■□□□□ 0.64
COMMD6-206ENST00000460675 ABCA5Q8WWZ7 1642 aa19.04■□□□□ 0.64
COMMD6-206ENST00000460675 ERCC6L2Q5T890 1561 aa19.02■□□□□ 0.63
COMMD6-206ENST00000460675 GRIN2AQ12879 1464 aa19.01■□□□□ 0.63
COMMD6-206ENST00000460675 WRNQ14191 1432 aaPredicted RBP eCLIP18.97■□□□□ 0.63
COMMD6-206ENST00000460675 SUPT5HO00267 1087 aaKnown RBP18.96■□□□□ 0.63
COMMD6-206ENST00000460675 CEP170Q5SW79 1584 aa18.96■□□□□ 0.63
COMMD6-206ENST00000460675 NUP160Q12769 1436 aa18.94■□□□□ 0.62
COMMD6-206ENST00000460675 ADAMTS12P58397 1594 aa18.93■□□□□ 0.62
COMMD6-206ENST00000460675 FHAD1B1AJZ9 1412 aa18.91■□□□□ 0.62
COMMD6-206ENST00000460675 SHROOM2Q13796 1616 aa18.87■□□□□ 0.61
COMMD6-206ENST00000460675 TOP2BQ02880 1626 aa18.85■□□□□ 0.61
COMMD6-206ENST00000460675 PRG4Q92954 1404 aaPredicted RBP18.84■□□□□ 0.61
COMMD6-206ENST00000460675 BIVM-ERCC5R4GMW8 1640 aa18.83■□□□□ 0.61
COMMD6-206ENST00000460675 JPH4Q96JJ6 628 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms