RNA–Protein interactions for RNA: ENST00000460610.1

RAF1-206, Transcript of Raf-1 proto-oncogene, serine/threonine kinase, humanhuman

TSL 3

Gene RAF1, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1-206ENST00000460610 NISCHQ9Y2I1 1504 aa18.65■□□□□ 0.58
RAF1-206ENST00000460610 AEBP2Q6ZN18 517 aaPredicted RBP17.57■□□□□ 0.4
RAF1-206ENST00000460610 ABCC9O60706 1549 aa17.43■□□□□ 0.38
RAF1-206ENST00000460610 CCDC180Q9P1Z9 1646 aa16.92■□□□□ 0.3
RAF1-206ENST00000460610 DNAJC5BQ9UF47 199 aa16.88■□□□□ 0.29
RAF1-206ENST00000460610 CHIC1Q5VXU3 224 aa16.73■□□□□ 0.27
RAF1-206ENST00000460610 RB1CC1Q8TDY2 1594 aa16.31■□□□□ 0.2
RAF1-206ENST00000460610 PABPN1Q86U42 306 aaKnown RBP eCLIP16.17■□□□□ 0.18
RAF1-206ENST00000460610 UNC13AQ9UPW8 1703 aa16.11■□□□□ 0.17
RAF1-206ENST00000460610 NACADO15069 1562 aa16.09■□□□□ 0.17
RAF1-206ENST00000460610 BICRAQ9NZM4 1560 aa15.98■□□□□ 0.15
RAF1-206ENST00000460610 DCAF8L2P0C7V8 631 aa15.93■□□□□ 0.14
RAF1-206ENST00000460610 DNAJC5Q9H3Z4 198 aa15.74■□□□□ 0.11
RAF1-206ENST00000460610 CC2D2AQ9P2K1 1620 aa15.73■□□□□ 0.11
RAF1-206ENST00000460610 CECR2Q9BXF3 1484 aa15.71■□□□□ 0.11
RAF1-206ENST00000460610 MYO15BQ96JP2 1530 aa15.68■□□□□ 0.1
RAF1-206ENST00000460610 EIF4G1Q04637 1599 aaKnown RBP15.55■□□□□ 0.08
RAF1-206ENST00000460610 SHROOM4Q9ULL8 1493 aa15.52■□□□□ 0.08
RAF1-206ENST00000460610 SCRIBQ14160 1630 aa15.43■□□□□ 0.06
RAF1-206ENST00000460610 ZCCHC6Q5VYS8 1495 aaKnown RBP15.34■□□□□ 0.05
RAF1-206ENST00000460610 DCAF1Q9Y4B6 1507 aa15.33■□□□□ 0.04
RAF1-206ENST00000460610 CUX2O14529 1486 aa15.14■□□□□ 0.01
RAF1-206ENST00000460610 ERCC6Q03468 1493 aa15□□□□□ -0.01
RAF1-206ENST00000460610 SENP3Q9H4L4 574 aaPredicted RBP14.91□□□□□ -0.02
RAF1-206ENST00000460610 NESP48681 1621 aa14.88□□□□□ -0.03
RAF1-206ENST00000460610 NCAPD3P42695 1498 aa14.88□□□□□ -0.03
RAF1-206ENST00000460610 TRIM41Q8WV44 630 aa14.84□□□□□ -0.03
RAF1-206ENST00000460610 THOC2Q8NI27 1593 aaKnown RBP14.8□□□□□ -0.04
RAF1-206ENST00000460610 ATAD2BQ9ULI0 1458 aa14.78□□□□□ -0.04
RAF1-206ENST00000460610 PHF23Q9BUL5 403 aaPredicted RBP14.76□□□□□ -0.05
RAF1-206ENST00000460610 HMGXB3Q12766 1538 aa14.71□□□□□ -0.06
RAF1-206ENST00000460610 KIF21AQ7Z4S6 1674 aa14.68□□□□□ -0.06
RAF1-206ENST00000460610 SMARCA2P51531 1590 aa14.66□□□□□ -0.06
RAF1-206ENST00000460610 SMARCA4P51532 1647 aa14.66□□□□□ -0.06
RAF1-206ENST00000460610 LAMC3Q9Y6N6 1575 aa14.6□□□□□ -0.07
RAF1-206ENST00000460610 BAZ1BQ9UIG0 1483 aaKnown RBP14.57□□□□□ -0.08
RAF1-206ENST00000460610 PEG3Q9GZU2 1588 aa14.5□□□□□ -0.09
RAF1-206ENST00000460610 PDS5BQ9NTI5 1447 aa14.49□□□□□ -0.09
RAF1-206ENST00000460610 BAZ1AQ9NRL2 1556 aaPredicted RBP14.47□□□□□ -0.09
RAF1-206ENST00000460610 WDR62O43379 1518 aa14.44□□□□□ -0.1
RAF1-206ENST00000460610 MRC2Q9UBG0 1479 aa14.44□□□□□ -0.1
RAF1-206ENST00000460610 MROH2BQ7Z745 1585 aa14.41□□□□□ -0.1
RAF1-206ENST00000460610 CADPSQ9ULU8 1353 aa14.39□□□□□ -0.11
RAF1-206ENST00000460610 OSCARQ8IYS5 282 aa14.37□□□□□ -0.11
RAF1-206ENST00000460610 RIMBP3CA6NJZ7 1639 aa14.33□□□□□ -0.12
RAF1-206ENST00000460610 RIMBP3BA6NNM3 1639 aa14.33□□□□□ -0.12
RAF1-206ENST00000460610 RIMBP3Q9UFD9 1639 aa14.33□□□□□ -0.12
RAF1-206ENST00000460610 CEP164Q9UPV0 1460 aa14.27□□□□□ -0.12
RAF1-206ENST00000460610 FANCD2Q9BXW9 1451 aa14.24□□□□□ -0.13
RAF1-206ENST00000460610 WIZO95785 1651 aa14.23□□□□□ -0.13
RAF1-206ENST00000460610 URB2Q14146 1524 aaKnown RBP14.2□□□□□ -0.14
RAF1-206ENST00000460610 ARHGEF11O15085 1522 aa14.2□□□□□ -0.14
RAF1-206ENST00000460610 CFTRP13569 1480 aa14.14□□□□□ -0.15
RAF1-206ENST00000460610 ZNF608Q9ULD9 1512 aaPredicted RBP14.12□□□□□ -0.15
RAF1-206ENST00000460610 CYB5RLQ6IPT4 315 aa14.12□□□□□ -0.15
RAF1-206ENST00000460610 TRHP20396 242 aaPredicted RBP14.08□□□□□ -0.16
RAF1-206ENST00000460610 ARAP1Q96P48 1450 aa14.06□□□□□ -0.16
RAF1-206ENST00000460610 CHD1O14646 1710 aa14.02□□□□□ -0.16
RAF1-206ENST00000460610 PRDM2Q13029 1718 aa14.01□□□□□ -0.17
RAF1-206ENST00000460610 IFT140Q96RY7 1462 aa13.99□□□□□ -0.17
RAF1-206ENST00000460610 EIF4G3O43432 1585 aaKnown RBP13.98□□□□□ -0.17
RAF1-206ENST00000460610 FOXD1Q16676 465 aa13.94□□□□□ -0.18
RAF1-206ENST00000460610 TOP2AP11388 1531 aaKnown RBP13.94□□□□□ -0.18
RAF1-206ENST00000460610 TOPBP1Q92547 1522 aa13.94□□□□□ -0.18
RAF1-206ENST00000460610 AQRO60306 1485 aaKnown RBP eCLIP13.92□□□□□ -0.181e-11■■■■■ 39.8
RAF1-206ENST00000460610 RSF1Q96T23 1441 aaPredicted RBP13.9□□□□□ -0.18
RAF1-206ENST00000460610 TARBP1Q13395 1621 aaKnown RBP13.89□□□□□ -0.19
RAF1-206ENST00000460610 FBLN2P98095 1184 aa13.86□□□□□ -0.19
RAF1-206ENST00000460610 CCDC88BA6NC98 1476 aa13.82□□□□□ -0.2
RAF1-206ENST00000460610 DNMBPQ6XZF7 1577 aa13.82□□□□□ -0.2
RAF1-206ENST00000460610 CLASP1Q7Z460 1538 aa13.8□□□□□ -0.2
RAF1-206ENST00000460610 ABCC8Q09428 1581 aa13.79□□□□□ -0.2
RAF1-206ENST00000460610 POLA1P09884 1462 aaPredicted RBP13.76□□□□□ -0.21
RAF1-206ENST00000460610 RAD54L2Q9Y4B4 1467 aa13.76□□□□□ -0.21
RAF1-206ENST00000460610 TDRD9Q8NDG6 1382 aaKnown RBP13.74□□□□□ -0.21
RAF1-206ENST00000460610 SNAPC4Q5SXM2 1469 aa13.73□□□□□ -0.21
RAF1-206ENST00000460610 SYNJ1O43426 1573 aa13.69□□□□□ -0.22
RAF1-206ENST00000460610 SOGA1O94964 1423 aa13.67□□□□□ -0.22
RAF1-206ENST00000460610 CHMP7Q8WUX9 453 aaPredicted RBP13.66□□□□□ -0.22
RAF1-206ENST00000460610 GAPVD1Q14C86 1478 aa13.66□□□□□ -0.22
RAF1-206ENST00000460610 ERCC6L2Q5T890 1561 aa13.63□□□□□ -0.23
RAF1-206ENST00000460610 MAGI1Q96QZ7 1491 aaPredicted RBP13.62□□□□□ -0.23
RAF1-206ENST00000460610 FGD5Q6ZNL6 1462 aa13.61□□□□□ -0.23
RAF1-206ENST00000460610 WDR97A6NE52 1622 aa13.6□□□□□ -0.23
RAF1-206ENST00000460610 SYNJ2O15056 1496 aa13.6□□□□□ -0.23
RAF1-206ENST00000460610 KIF13AQ9H1H9 1805 aa13.6□□□□□ -0.23
RAF1-206ENST00000460610 GRIN2BQ13224 1484 aa13.59□□□□□ -0.23
RAF1-206ENST00000460610 PBRM1Q86U86 1689 aa13.57□□□□□ -0.24
RAF1-206ENST00000460610 SLC24A1O60721 1099 aa13.57□□□□□ -0.24
RAF1-206ENST00000460610 CUX1P39880 1505 aa13.55□□□□□ -0.24
RAF1-206ENST00000460610 ILDR1Q86SU0 546 aaPredicted RBP13.54□□□□□ -0.24
RAF1-206ENST00000460610 CEP170Q5SW79 1584 aa13.49□□□□□ -0.25
RAF1-206ENST00000460610 KDM4FA0A1W2PPD8 638 aa13.48□□□□□ -0.25
RAF1-206ENST00000460610 ABCA5Q8WWZ7 1642 aa13.46□□□□□ -0.25
RAF1-206ENST00000460610 SHROOM2Q13796 1616 aa13.44□□□□□ -0.26
RAF1-206ENST00000460610 GRIN2AQ12879 1464 aa13.43□□□□□ -0.26
RAF1-206ENST00000460610 NUP160Q12769 1436 aa13.41□□□□□ -0.26
RAF1-206ENST00000460610 ABCA10Q8WWZ4 1543 aa13.41□□□□□ -0.26
RAF1-206ENST00000460610 ADAMTS12P58397 1594 aa13.38□□□□□ -0.27
RAF1-206ENST00000460610 FAM69CQ0P6D2 419 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms