RNA–Protein interactions for RNA: ENST00000460518.1

SLC18B1-203, Transcript of solute carrier family 18 member B1, humanhuman

TSL 5

Gene SLC18B1, Length 491 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC18B1-203ENST00000460518 NISCHQ9Y2I1 1504 aa23.54■■□□□ 1.36
SLC18B1-203ENST00000460518 ABCC9O60706 1549 aa21.38■■□□□ 1.01
SLC18B1-203ENST00000460518 CCDC180Q9P1Z9 1646 aa21.11■□□□□ 0.97
SLC18B1-203ENST00000460518 DNAJC5BQ9UF47 199 aa20.36■□□□□ 0.85
SLC18B1-203ENST00000460518 RB1CC1Q8TDY2 1594 aa20.28■□□□□ 0.84
SLC18B1-203ENST00000460518 NACADO15069 1562 aa20.13■□□□□ 0.81
SLC18B1-203ENST00000460518 DCAF8L2P0C7V8 631 aa20.01■□□□□ 0.79
SLC18B1-203ENST00000460518 PABPN1Q86U42 306 aaKnown RBP eCLIP19.94■□□□□ 0.78
SLC18B1-203ENST00000460518 MYO15BQ96JP2 1530 aa19.87■□□□□ 0.77
SLC18B1-203ENST00000460518 BICRAQ9NZM4 1560 aa19.65■□□□□ 0.74
SLC18B1-203ENST00000460518 UNC13AQ9UPW8 1703 aa19.57■□□□□ 0.72
SLC18B1-203ENST00000460518 SHROOM4Q9ULL8 1493 aa19.52■□□□□ 0.72
SLC18B1-203ENST00000460518 DCAF1Q9Y4B6 1507 aa19.5■□□□□ 0.71
SLC18B1-203ENST00000460518 ZCCHC6Q5VYS8 1495 aaKnown RBP19.42■□□□□ 0.7
SLC18B1-203ENST00000460518 CECR2Q9BXF3 1484 aa19.34■□□□□ 0.69
SLC18B1-203ENST00000460518 CC2D2AQ9P2K1 1620 aa19.26■□□□□ 0.67
SLC18B1-203ENST00000460518 EIF4G1Q04637 1599 aaKnown RBP19.2■□□□□ 0.66
SLC18B1-203ENST00000460518 SCRIBQ14160 1630 aa19.16■□□□□ 0.66
SLC18B1-203ENST00000460518 DNAJC5Q9H3Z4 198 aa18.96■□□□□ 0.63
SLC18B1-203ENST00000460518 NCAPD3P42695 1498 aa18.66■□□□□ 0.58
SLC18B1-203ENST00000460518 CUX2O14529 1486 aa18.6■□□□□ 0.57
SLC18B1-203ENST00000460518 ERCC6Q03468 1493 aa18.51■□□□□ 0.55
SLC18B1-203ENST00000460518 ATAD2BQ9ULI0 1458 aa18.51■□□□□ 0.55
SLC18B1-203ENST00000460518 SMARCA2P51531 1590 aa18.42■□□□□ 0.54
SLC18B1-203ENST00000460518 HMGXB3Q12766 1538 aa18.39■□□□□ 0.54
SLC18B1-203ENST00000460518 SMARCA4P51532 1647 aa18.31■□□□□ 0.52
SLC18B1-203ENST00000460518 BAZ1BQ9UIG0 1483 aaKnown RBP18.28■□□□□ 0.52
SLC18B1-203ENST00000460518 BAZ1AQ9NRL2 1556 aaPredicted RBP18.28■□□□□ 0.52
SLC18B1-203ENST00000460518 NESP48681 1621 aa18.27■□□□□ 0.52
SLC18B1-203ENST00000460518 PEG3Q9GZU2 1588 aa18.23■□□□□ 0.51
SLC18B1-203ENST00000460518 PDS5BQ9NTI5 1447 aa18.18■□□□□ 0.5
SLC18B1-203ENST00000460518 LAMC3Q9Y6N6 1575 aa18.17■□□□□ 0.5
SLC18B1-203ENST00000460518 CADPSQ9ULU8 1353 aa18.09■□□□□ 0.49
SLC18B1-203ENST00000460518 MROH2BQ7Z745 1585 aa18.08■□□□□ 0.49
SLC18B1-203ENST00000460518 THOC2Q8NI27 1593 aaKnown RBP18.08■□□□□ 0.48
SLC18B1-203ENST00000460518 MRC2Q9UBG0 1479 aa17.95■□□□□ 0.46
SLC18B1-203ENST00000460518 KIF21AQ7Z4S6 1674 aa17.9■□□□□ 0.46
SLC18B1-203ENST00000460518 TRIM41Q8WV44 630 aa17.89■□□□□ 0.45
SLC18B1-203ENST00000460518 WDR62O43379 1518 aa17.88■□□□□ 0.45
SLC18B1-203ENST00000460518 OSCARQ8IYS5 282 aa17.83■□□□□ 0.44
SLC18B1-203ENST00000460518 CEP164Q9UPV0 1460 aa17.82■□□□□ 0.44
SLC18B1-203ENST00000460518 CFTRP13569 1480 aa17.8■□□□□ 0.44
SLC18B1-203ENST00000460518 FANCD2Q9BXW9 1451 aa17.79■□□□□ 0.44
SLC18B1-203ENST00000460518 WIZO95785 1651 aa17.76■□□□□ 0.43
SLC18B1-203ENST00000460518 RSF1Q96T23 1441 aaPredicted RBP17.72■□□□□ 0.43
SLC18B1-203ENST00000460518 URB2Q14146 1524 aaKnown RBP17.62■□□□□ 0.41
SLC18B1-203ENST00000460518 TOP2AP11388 1531 aaKnown RBP17.61■□□□□ 0.41
SLC18B1-203ENST00000460518 IFT140Q96RY7 1462 aa17.52■□□□□ 0.4
SLC18B1-203ENST00000460518 CCDC88BA6NC98 1476 aa17.47■□□□□ 0.39
SLC18B1-203ENST00000460518 ABCC8Q09428 1581 aa17.47■□□□□ 0.39
SLC18B1-203ENST00000460518 ZNF608Q9ULD9 1512 aaPredicted RBP17.44■□□□□ 0.38
SLC18B1-203ENST00000460518 TOPBP1Q92547 1522 aa17.41■□□□□ 0.38
SLC18B1-203ENST00000460518 ARHGEF11O15085 1522 aa17.37■□□□□ 0.37
SLC18B1-203ENST00000460518 RIMBP3CA6NJZ7 1639 aa17.36■□□□□ 0.37
SLC18B1-203ENST00000460518 RIMBP3BA6NNM3 1639 aa17.36■□□□□ 0.37
SLC18B1-203ENST00000460518 RIMBP3Q9UFD9 1639 aa17.36■□□□□ 0.37
SLC18B1-203ENST00000460518 CYB5RLQ6IPT4 315 aa17.36■□□□□ 0.37
SLC18B1-203ENST00000460518 PRDM2Q13029 1718 aa17.31■□□□□ 0.36
SLC18B1-203ENST00000460518 DNMBPQ6XZF7 1577 aa17.3■□□□□ 0.36
SLC18B1-203ENST00000460518 AQRO60306 1485 aaKnown RBP eCLIP17.3■□□□□ 0.36
SLC18B1-203ENST00000460518 FBLN2P98095 1184 aa17.27■□□□□ 0.36
SLC18B1-203ENST00000460518 EIF4G3O43432 1585 aaKnown RBP17.23■□□□□ 0.35
SLC18B1-203ENST00000460518 TARBP1Q13395 1621 aaKnown RBP17.22■□□□□ 0.35
SLC18B1-203ENST00000460518 TRHP20396 242 aaPredicted RBP17.22■□□□□ 0.35
SLC18B1-203ENST00000460518 POLA1P09884 1462 aaPredicted RBP17.22■□□□□ 0.35
SLC18B1-203ENST00000460518 SOGA1O94964 1423 aa17.21■□□□□ 0.35
SLC18B1-203ENST00000460518 TDRD9Q8NDG6 1382 aaKnown RBP17.19■□□□□ 0.34
SLC18B1-203ENST00000460518 ARAP1Q96P48 1450 aa17.18■□□□□ 0.34
SLC18B1-203ENST00000460518 CHMP7Q8WUX9 453 aaPredicted RBP17.17■□□□□ 0.34
SLC18B1-203ENST00000460518 RAD54L2Q9Y4B4 1467 aa17.14■□□□□ 0.33
SLC18B1-203ENST00000460518 WDR97A6NE52 1622 aa17.1■□□□□ 0.33
SLC18B1-203ENST00000460518 CHD1O14646 1710 aa17.08■□□□□ 0.32
SLC18B1-203ENST00000460518 MAGI1Q96QZ7 1491 aaPredicted RBP17.08■□□□□ 0.32
SLC18B1-203ENST00000460518 GRIN2BQ13224 1484 aa17.07■□□□□ 0.32
SLC18B1-203ENST00000460518 SNAPC4Q5SXM2 1469 aa17.06■□□□□ 0.32
SLC18B1-203ENST00000460518 FGD5Q6ZNL6 1462 aa17.05■□□□□ 0.32
SLC18B1-203ENST00000460518 CLASP1Q7Z460 1538 aa17.03■□□□□ 0.32
SLC18B1-203ENST00000460518 SYNJ2O15056 1496 aa17.03■□□□□ 0.32
SLC18B1-203ENST00000460518 SYNJ1O43426 1573 aa17.01■□□□□ 0.31
SLC18B1-203ENST00000460518 CUX1P39880 1505 aa17■□□□□ 0.31
SLC18B1-203ENST00000460518 GAPVD1Q14C86 1478 aa16.96■□□□□ 0.31
SLC18B1-203ENST00000460518 ABCA10Q8WWZ4 1543 aa16.91■□□□□ 0.3
SLC18B1-203ENST00000460518 AEBP2Q6ZN18 517 aaPredicted RBP16.91■□□□□ 0.3
SLC18B1-203ENST00000460518 WRNQ14191 1432 aaPredicted RBP eCLIP16.86■□□□□ 0.29
SLC18B1-203ENST00000460518 GRIN2AQ12879 1464 aa16.8■□□□□ 0.28
SLC18B1-203ENST00000460518 NUP160Q12769 1436 aa16.8■□□□□ 0.28
SLC18B1-203ENST00000460518 ABCA5Q8WWZ7 1642 aa16.78■□□□□ 0.28
SLC18B1-203ENST00000460518 FHAD1B1AJZ9 1412 aa16.78■□□□□ 0.28
SLC18B1-203ENST00000460518 SUPT5HO00267 1087 aaKnown RBP16.75■□□□□ 0.27
SLC18B1-203ENST00000460518 PBRM1Q86U86 1689 aa16.75■□□□□ 0.27
SLC18B1-203ENST00000460518 JPH4Q96JJ6 628 aa16.72■□□□□ 0.27
SLC18B1-203ENST00000460518 CEP170Q5SW79 1584 aa16.7■□□□□ 0.26
SLC18B1-203ENST00000460518 ERICH3Q5RHP9 1530 aa16.69■□□□□ 0.26
SLC18B1-203ENST00000460518 ERCC6L2Q5T890 1561 aa16.68■□□□□ 0.26
SLC18B1-203ENST00000460518 ADAMTS12P58397 1594 aa16.67■□□□□ 0.26
SLC18B1-203ENST00000460518 TOP2BQ02880 1626 aa16.66■□□□□ 0.26
SLC18B1-203ENST00000460518 PRG4Q92954 1404 aaPredicted RBP16.65■□□□□ 0.26
SLC18B1-203ENST00000460518 SHROOM2Q13796 1616 aa16.65■□□□□ 0.26
SLC18B1-203ENST00000460518 NPM1P06748 294 aaKnown RBP eCLIP16.64■□□□□ 0.25
SLC18B1-203ENST00000460518 BIVM-ERCC5R4GMW8 1640 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms