RNA–Protein interactions for RNA: ENST00000459903.5

RABGAP1-206, Transcript of RAB GTPase activating protein 1, humanhuman

TSL 4

Gene RABGAP1, Length 572 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGAP1-206ENST00000459903 NISCHQ9Y2I1 1504 aa58.09■■■■■ 6.89
RABGAP1-206ENST00000459903 CCDC180Q9P1Z9 1646 aa51.64■■■■■ 5.86
RABGAP1-206ENST00000459903 ABCC9O60706 1549 aa50.44■■■■■ 5.67
RABGAP1-206ENST00000459903 RB1CC1Q8TDY2 1594 aa48.6■■■■■ 5.37
RABGAP1-206ENST00000459903 NACADO15069 1562 aa48.56■■■■■ 5.36
RABGAP1-206ENST00000459903 DCAF8L2P0C7V8 631 aa48.48■■■■■ 5.35
RABGAP1-206ENST00000459903 ZCCHC6Q5VYS8 1495 aaKnown RBP48.4■■■■■ 5.34
RABGAP1-206ENST00000459903 MYO15BQ96JP2 1530 aa48.33■■■■■ 5.33
RABGAP1-206ENST00000459903 DCAF1Q9Y4B6 1507 aa48.12■■■■■ 5.29
RABGAP1-206ENST00000459903 UNC13AQ9UPW8 1703 aa47.39■■■■■ 5.18
RABGAP1-206ENST00000459903 PABPN1Q86U42 306 aaKnown RBP eCLIP47.13■■■■■ 5.14
RABGAP1-206ENST00000459903 BICRAQ9NZM4 1560 aa47.07■■■■■ 5.13
RABGAP1-206ENST00000459903 SCRIBQ14160 1630 aa47.05■■■■■ 5.12
RABGAP1-206ENST00000459903 SHROOM4Q9ULL8 1493 aa46.71■■■■■ 5.07
RABGAP1-206ENST00000459903 DNAJC5BQ9UF47 199 aa46.23■■■■■ 4.99
RABGAP1-206ENST00000459903 EIF4G1Q04637 1599 aaKnown RBP45.85■■■■■ 4.93
RABGAP1-206ENST00000459903 CC2D2AQ9P2K1 1620 aa45.64■■■■■ 4.9
RABGAP1-206ENST00000459903 CECR2Q9BXF3 1484 aa45.36■■■■■ 4.85
RABGAP1-206ENST00000459903 SMARCA4P51532 1647 aa45.05■■■■■ 4.8
RABGAP1-206ENST00000459903 BAZ1AQ9NRL2 1556 aaPredicted RBP45.03■■■■■ 4.8
RABGAP1-206ENST00000459903 NCAPD3P42695 1498 aa44.82■■■■■ 4.77
RABGAP1-206ENST00000459903 ATAD2BQ9ULI0 1458 aa44.82■■■■■ 4.77
RABGAP1-206ENST00000459903 SMARCA2P51531 1590 aa44.8■■■■■ 4.76
RABGAP1-206ENST00000459903 MROH2BQ7Z745 1585 aa44.73■■■■■ 4.75
RABGAP1-206ENST00000459903 PEG3Q9GZU2 1588 aa44.65■■■■■ 4.74
RABGAP1-206ENST00000459903 HMGXB3Q12766 1538 aa44.6■■■■■ 4.73
RABGAP1-206ENST00000459903 BAZ1BQ9UIG0 1483 aaKnown RBP44.46■■■■■ 4.71
RABGAP1-206ENST00000459903 RSF1Q96T23 1441 aaPredicted RBP44.26■■■■■ 4.68
RABGAP1-206ENST00000459903 WIZO95785 1651 aa44.23■■■■■ 4.67
RABGAP1-206ENST00000459903 TOP2AP11388 1531 aaKnown RBP43.82■■■■■ 4.61
RABGAP1-206ENST00000459903 NESP48681 1621 aa43.64■■■■■ 4.58
RABGAP1-206ENST00000459903 LAMC3Q9Y6N6 1575 aa43.62■■■■■ 4.57
RABGAP1-206ENST00000459903 ERCC6Q03468 1493 aa43.51■■■■■ 4.56
RABGAP1-206ENST00000459903 CADPSQ9ULU8 1353 aa43.51■■■■■ 4.56
RABGAP1-206ENST00000459903 PDS5BQ9NTI5 1447 aa43.35■■■■■ 4.53
RABGAP1-206ENST00000459903 CCDC88BA6NC98 1476 aa43.29■■■■■ 4.52
RABGAP1-206ENST00000459903 CFTRP13569 1480 aa43.25■■■■■ 4.51
RABGAP1-206ENST00000459903 SUPT5HO00267 1087 aaKnown RBP43.13■■■■■ 4.49
RABGAP1-206ENST00000459903 KIF21AQ7Z4S6 1674 aa43.12■■■■■ 4.49
RABGAP1-206ENST00000459903 CUX2O14529 1486 aa43.08■■■■■ 4.49
RABGAP1-206ENST00000459903 THOC2Q8NI27 1593 aaKnown RBP43■■■■■ 4.47
RABGAP1-206ENST00000459903 FANCD2Q9BXW9 1451 aa42.99■■■■■ 4.47
RABGAP1-206ENST00000459903 CEP164Q9UPV0 1460 aa42.94■■■■■ 4.46
RABGAP1-206ENST00000459903 PRDM2Q13029 1718 aa42.88■■■■■ 4.45
RABGAP1-206ENST00000459903 MRC2Q9UBG0 1479 aa42.87■■■■■ 4.45
RABGAP1-206ENST00000459903 WDR62O43379 1518 aa42.72■■■■■ 4.43
RABGAP1-206ENST00000459903 URB2Q14146 1524 aaKnown RBP42.52■■■■■ 4.4
RABGAP1-206ENST00000459903 ABCC8Q09428 1581 aa42.35■■■■■ 4.37
RABGAP1-206ENST00000459903 TOPBP1Q92547 1522 aa42.3■■■■■ 4.36
RABGAP1-206ENST00000459903 DNMBPQ6XZF7 1577 aa42.26■■■■■ 4.36
RABGAP1-206ENST00000459903 IFT140Q96RY7 1462 aa42.05■■■■■ 4.32
RABGAP1-206ENST00000459903 CUX1P39880 1505 aa41.97■■■■■ 4.31
RABGAP1-206ENST00000459903 POLA1P09884 1462 aaPredicted RBP41.94■■■■■ 4.3
RABGAP1-206ENST00000459903 FGD5Q6ZNL6 1462 aa41.84■■■■■ 4.29
RABGAP1-206ENST00000459903 TARBP1Q13395 1621 aaKnown RBP41.81■■■■■ 4.28
RABGAP1-206ENST00000459903 ZNF608Q9ULD9 1512 aaPredicted RBP41.79■■■■■ 4.28
RABGAP1-206ENST00000459903 SOGA1O94964 1423 aa41.78■■■■■ 4.28
RABGAP1-206ENST00000459903 WRNQ14191 1432 aaPredicted RBP eCLIP41.76■■■■■ 4.28
RABGAP1-206ENST00000459903 RAD54L2Q9Y4B4 1467 aa41.72■■■■■ 4.27
RABGAP1-206ENST00000459903 DNAJC5Q9H3Z4 198 aa41.69■■■■■ 4.26
RABGAP1-206ENST00000459903 TOP2BQ02880 1626 aa41.65■■■■■ 4.26
RABGAP1-206ENST00000459903 EIF4G3O43432 1585 aaKnown RBP41.64■■■■■ 4.26
RABGAP1-206ENST00000459903 BIVM-ERCC5R4GMW8 1640 aa41.62■■■■■ 4.25
RABGAP1-206ENST00000459903 SYNJ1O43426 1573 aa41.59■■■■■ 4.25
RABGAP1-206ENST00000459903 AQRO60306 1485 aaKnown RBP eCLIP41.58■■■■■ 4.256e-6■■■■□ 23.2
RABGAP1-206ENST00000459903 WDR97A6NE52 1622 aa41.56■■■■■ 4.24
RABGAP1-206ENST00000459903 TDRD9Q8NDG6 1382 aaKnown RBP41.51■■■■■ 4.24
RABGAP1-206ENST00000459903 ABCA10Q8WWZ4 1543 aa41.47■■■■■ 4.23
RABGAP1-206ENST00000459903 GRIN2BQ13224 1484 aa41.3■■■■■ 4.2
RABGAP1-206ENST00000459903 GAPVD1Q14C86 1478 aa41.3■■■■■ 4.2
RABGAP1-206ENST00000459903 OSCARQ8IYS5 282 aa41.3■■■■■ 4.2
RABGAP1-206ENST00000459903 ABCA5Q8WWZ7 1642 aa41.26■■■■■ 4.2
RABGAP1-206ENST00000459903 SNAPC4Q5SXM2 1469 aa41.21■■■■■ 4.19
RABGAP1-206ENST00000459903 MAGI1Q96QZ7 1491 aaPredicted RBP41.2■■■■■ 4.19
RABGAP1-206ENST00000459903 PBRM1Q86U86 1689 aa41.16■■■■■ 4.18
RABGAP1-206ENST00000459903 FBLN2P98095 1184 aa41.08■■■■■ 4.17
RABGAP1-206ENST00000459903 CHD1O14646 1710 aa41.07■■■■■ 4.17
RABGAP1-206ENST00000459903 SYNJ2O15056 1496 aa41.03■■■■■ 4.16
RABGAP1-206ENST00000459903 CHMP7Q8WUX9 453 aaPredicted RBP41.01■■■■■ 4.16
RABGAP1-206ENST00000459903 ERICH3Q5RHP9 1530 aa40.98■■■■■ 4.15
RABGAP1-206ENST00000459903 KIF27Q86VH2 1401 aa40.9■■■■■ 4.14
RABGAP1-206ENST00000459903 ADAMTS12P58397 1594 aa40.86■■■■■ 4.13
RABGAP1-206ENST00000459903 FHAD1B1AJZ9 1412 aa40.84■■■■■ 4.13
RABGAP1-206ENST00000459903 TRIM41Q8WV44 630 aa40.79■■■■■ 4.12
RABGAP1-206ENST00000459903 GRIN2AQ12879 1464 aa40.76■■■■■ 4.12
RABGAP1-206ENST00000459903 IGF1RP08069 1367 aa40.71■■■■■ 4.11
RABGAP1-206ENST00000459903 CLASP1Q7Z460 1538 aa40.68■■■■■ 4.1
RABGAP1-206ENST00000459903 CUL7Q14999 1698 aa40.59■■■■■ 4.09
RABGAP1-206ENST00000459903 NUP160Q12769 1436 aa40.59■■■■■ 4.09
RABGAP1-206ENST00000459903 ARHGEF11O15085 1522 aa40.58■■■■■ 4.09
RABGAP1-206ENST00000459903 RIMBP3CA6NJZ7 1639 aa40.56■■■■■ 4.08
RABGAP1-206ENST00000459903 RIMBP3BA6NNM3 1639 aa40.56■■■■■ 4.08
RABGAP1-206ENST00000459903 RIMBP3Q9UFD9 1639 aa40.56■■■■■ 4.08
RABGAP1-206ENST00000459903 CEP170Q5SW79 1584 aa40.52■■■■■ 4.08
RABGAP1-206ENST00000459903 CARMIL1Q5VZK9 1371 aa40.48■■■■■ 4.07
RABGAP1-206ENST00000459903 RUSC2Q8N2Y8 1516 aa40.44■■■■■ 4.06
RABGAP1-206ENST00000459903 CHIC1Q5VXU3 224 aa40.29■■■■■ 4.04
RABGAP1-206ENST00000459903 ARAP1Q96P48 1450 aa40.26■■■■■ 4.03
RABGAP1-206ENST00000459903 SHROOM2Q13796 1616 aa40.25■■■■■ 4.03
RABGAP1-206ENST00000459903 RAPGEF2Q9Y4G8 1499 aa40.24■■■■■ 4.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms