RNA–Protein interactions for RNA: ENST00000459873.1

PCCB-202, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 4

Gene PCCB, Length 534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-202ENST00000459873 NISCHQ9Y2I1 1504 aa22.32■■□□□ 1.16
PCCB-202ENST00000459873 CCDC180Q9P1Z9 1646 aa19.91■□□□□ 0.78
PCCB-202ENST00000459873 ABCC9O60706 1549 aa19.11■□□□□ 0.65
PCCB-202ENST00000459873 ZCCHC6Q5VYS8 1495 aaKnown RBP18.71■□□□□ 0.59
PCCB-202ENST00000459873 NACADO15069 1562 aa18.56■□□□□ 0.56
PCCB-202ENST00000459873 MYO15BQ96JP2 1530 aa18.55■□□□□ 0.56
PCCB-202ENST00000459873 RB1CC1Q8TDY2 1594 aa18.55■□□□□ 0.56
PCCB-202ENST00000459873 DCAF1Q9Y4B6 1507 aa18.54■□□□□ 0.56
PCCB-202ENST00000459873 UNC13AQ9UPW8 1703 aa18.24■□□□□ 0.51
PCCB-202ENST00000459873 DCAF8L2P0C7V8 631 aa18.23■□□□□ 0.51
PCCB-202ENST00000459873 SCRIBQ14160 1630 aa18.09■□□□□ 0.49
PCCB-202ENST00000459873 BICRAQ9NZM4 1560 aa18.02■□□□□ 0.48
PCCB-202ENST00000459873 SHROOM4Q9ULL8 1493 aa17.89■□□□□ 0.45
PCCB-202ENST00000459873 PABPN1Q86U42 306 aaKnown RBP eCLIP17.75■□□□□ 0.43
PCCB-202ENST00000459873 EIF4G1Q04637 1599 aaKnown RBP17.51■□□□□ 0.39
PCCB-202ENST00000459873 CC2D2AQ9P2K1 1620 aa17.37■□□□□ 0.37
PCCB-202ENST00000459873 SMARCA4P51532 1647 aa17.35■□□□□ 0.37
PCCB-202ENST00000459873 CECR2Q9BXF3 1484 aa17.32■□□□□ 0.36
PCCB-202ENST00000459873 BAZ1AQ9NRL2 1556 aaPredicted RBP17.32■□□□□ 0.36
PCCB-202ENST00000459873 DNAJC5BQ9UF47 199 aa17.25■□□□□ 0.35
PCCB-202ENST00000459873 PEG3Q9GZU2 1588 aa17.21■□□□□ 0.35
PCCB-202ENST00000459873 MROH2BQ7Z745 1585 aa17.2■□□□□ 0.34
PCCB-202ENST00000459873 SMARCA2P51531 1590 aa17.15■□□□□ 0.34
PCCB-202ENST00000459873 ATAD2BQ9ULI0 1458 aa17.12■□□□□ 0.33
PCCB-202ENST00000459873 HMGXB3Q12766 1538 aa17.12■□□□□ 0.33
PCCB-202ENST00000459873 NCAPD3P42695 1498 aa17.07■□□□□ 0.32
PCCB-202ENST00000459873 WIZO95785 1651 aa17.05■□□□□ 0.32
PCCB-202ENST00000459873 RSF1Q96T23 1441 aaPredicted RBP17.02■□□□□ 0.31
PCCB-202ENST00000459873 BAZ1BQ9UIG0 1483 aaKnown RBP17■□□□□ 0.31
PCCB-202ENST00000459873 TOP2AP11388 1531 aaKnown RBP16.91■□□□□ 0.3
PCCB-202ENST00000459873 LAMC3Q9Y6N6 1575 aa16.67■□□□□ 0.26
PCCB-202ENST00000459873 PRDM2Q13029 1718 aa16.62■□□□□ 0.25
PCCB-202ENST00000459873 NESP48681 1621 aa16.61■□□□□ 0.25
PCCB-202ENST00000459873 CCDC88BA6NC98 1476 aa16.61■□□□□ 0.25
PCCB-202ENST00000459873 CFTRP13569 1480 aa16.54■□□□□ 0.24
PCCB-202ENST00000459873 KIF21AQ7Z4S6 1674 aa16.54■□□□□ 0.24
PCCB-202ENST00000459873 CADPSQ9ULU8 1353 aa16.52■□□□□ 0.24
PCCB-202ENST00000459873 SUPT5HO00267 1087 aaKnown RBP16.52■□□□□ 0.24
PCCB-202ENST00000459873 THOC2Q8NI27 1593 aaKnown RBP16.47■□□□□ 0.23
PCCB-202ENST00000459873 ERCC6Q03468 1493 aa16.45■□□□□ 0.22
PCCB-202ENST00000459873 PDS5BQ9NTI5 1447 aa16.44■□□□□ 0.22
PCCB-202ENST00000459873 FANCD2Q9BXW9 1451 aa16.41■□□□□ 0.22
PCCB-202ENST00000459873 CEP164Q9UPV0 1460 aa16.39■□□□□ 0.21
PCCB-202ENST00000459873 MRC2Q9UBG0 1479 aa16.34■□□□□ 0.21
PCCB-202ENST00000459873 WDR62O43379 1518 aa16.34■□□□□ 0.21
PCCB-202ENST00000459873 CUX2O14529 1486 aa16.29■□□□□ 0.2
PCCB-202ENST00000459873 URB2Q14146 1524 aaKnown RBP16.26■□□□□ 0.19
PCCB-202ENST00000459873 DNMBPQ6XZF7 1577 aa16.23■□□□□ 0.19
PCCB-202ENST00000459873 TOPBP1Q92547 1522 aa16.19■□□□□ 0.18
PCCB-202ENST00000459873 CUX1P39880 1505 aa16.15■□□□□ 0.18
PCCB-202ENST00000459873 ABCC8Q09428 1581 aa16.14■□□□□ 0.17
PCCB-202ENST00000459873 BIVM-ERCC5R4GMW8 1640 aa16.13■□□□□ 0.17
PCCB-202ENST00000459873 SYNJ1O43426 1573 aa16.1■□□□□ 0.17
PCCB-202ENST00000459873 TOP2BQ02880 1626 aa16.09■□□□□ 0.17
PCCB-202ENST00000459873 POLA1P09884 1462 aaPredicted RBP16.07■□□□□ 0.16
PCCB-202ENST00000459873 WDR97A6NE52 1622 aa16.07■□□□□ 0.16
PCCB-202ENST00000459873 TARBP1Q13395 1621 aaKnown RBP16.06■□□□□ 0.16
PCCB-202ENST00000459873 FGD5Q6ZNL6 1462 aa16.04■□□□□ 0.16
PCCB-202ENST00000459873 WRNQ14191 1432 aaPredicted RBP eCLIP16.04■□□□□ 0.16
PCCB-202ENST00000459873 IFT140Q96RY7 1462 aa16.02■□□□□ 0.15
PCCB-202ENST00000459873 EIF4G3O43432 1585 aaKnown RBP16■□□□□ 0.15
PCCB-202ENST00000459873 RAD54L2Q9Y4B4 1467 aa15.93■□□□□ 0.14
PCCB-202ENST00000459873 ABCA5Q8WWZ7 1642 aa15.93■□□□□ 0.14
PCCB-202ENST00000459873 ZNF608Q9ULD9 1512 aaPredicted RBP15.93■□□□□ 0.14
PCCB-202ENST00000459873 ABCA10Q8WWZ4 1543 aa15.91■□□□□ 0.14
PCCB-202ENST00000459873 PBRM1Q86U86 1689 aa15.89■□□□□ 0.13
PCCB-202ENST00000459873 SOGA1O94964 1423 aa15.88■□□□□ 0.13
PCCB-202ENST00000459873 AQRO60306 1485 aaKnown RBP eCLIP15.79■□□□□ 0.123e-6■■■■□ 21.1
PCCB-202ENST00000459873 GAPVD1Q14C86 1478 aa15.77■□□□□ 0.11
PCCB-202ENST00000459873 TDRD9Q8NDG6 1382 aaKnown RBP15.76■□□□□ 0.11
PCCB-202ENST00000459873 ADAMTS12P58397 1594 aa15.76■□□□□ 0.11
PCCB-202ENST00000459873 GRIN2BQ13224 1484 aa15.76■□□□□ 0.11
PCCB-202ENST00000459873 CHD1O14646 1710 aa15.75■□□□□ 0.11
PCCB-202ENST00000459873 SNAPC4Q5SXM2 1469 aa15.75■□□□□ 0.11
PCCB-202ENST00000459873 MAGI1Q96QZ7 1491 aaPredicted RBP15.74■□□□□ 0.11
PCCB-202ENST00000459873 ERICH3Q5RHP9 1530 aa15.73■□□□□ 0.11
PCCB-202ENST00000459873 CUL7Q14999 1698 aa15.69■□□□□ 0.1
PCCB-202ENST00000459873 KIF27Q86VH2 1401 aa15.67■□□□□ 0.1
PCCB-202ENST00000459873 SYNJ2O15056 1496 aa15.65■□□□□ 0.1
PCCB-202ENST00000459873 TRIM41Q8WV44 630 aa15.6■□□□□ 0.09
PCCB-202ENST00000459873 FHAD1B1AJZ9 1412 aa15.6■□□□□ 0.09
PCCB-202ENST00000459873 GRIN2AQ12879 1464 aa15.59■□□□□ 0.09
PCCB-202ENST00000459873 RUSC2Q8N2Y8 1516 aa15.58■□□□□ 0.09
PCCB-202ENST00000459873 CLASP1Q7Z460 1538 aa15.58■□□□□ 0.08
PCCB-202ENST00000459873 CHIC1Q5VXU3 224 aa15.56■□□□□ 0.08
PCCB-202ENST00000459873 CEP170Q5SW79 1584 aa15.56■□□□□ 0.08
PCCB-202ENST00000459873 IGF1RP08069 1367 aa15.53■□□□□ 0.08
PCCB-202ENST00000459873 EEA1Q15075 1411 aa15.52■□□□□ 0.08
PCCB-202ENST00000459873 NUP160Q12769 1436 aa15.51■□□□□ 0.07
PCCB-202ENST00000459873 PRXQ9BXM0 1461 aa15.47■□□□□ 0.07
PCCB-202ENST00000459873 SHROOM2Q13796 1616 aa15.46■□□□□ 0.07
PCCB-202ENST00000459873 CTTNBP2Q8WZ74 1663 aa15.45■□□□□ 0.06
PCCB-202ENST00000459873 KIF21BO75037 1637 aa15.45■□□□□ 0.06
PCCB-202ENST00000459873 CHMP7Q8WUX9 453 aaPredicted RBP15.44■□□□□ 0.06
PCCB-202ENST00000459873 CARMIL1Q5VZK9 1371 aa15.44■□□□□ 0.06
PCCB-202ENST00000459873 RAPGEF2Q9Y4G8 1499 aa15.44■□□□□ 0.06
PCCB-202ENST00000459873 FBLN2P98095 1184 aa15.42■□□□□ 0.06
PCCB-202ENST00000459873 OSCARQ8IYS5 282 aa15.41■□□□□ 0.06
PCCB-202ENST00000459873 RIMBP3CA6NJZ7 1639 aa15.4■□□□□ 0.06
PCCB-202ENST00000459873 RIMBP3BA6NNM3 1639 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 168 ms