RNA–Protein interactions for RNA: ENST00000459799.1

SCNM1-203, Transcript of sodium channel modifier 1, humanhuman

TSL 2

Gene SCNM1, Length 619 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-203ENST00000459799 NISCHQ9Y2I1 1504 aa23.68■■□□□ 1.38
SCNM1-203ENST00000459799 ABCC9O60706 1549 aa22.09■■□□□ 1.13
SCNM1-203ENST00000459799 AEBP2Q6ZN18 517 aaPredicted RBP21.9■■□□□ 1.1
SCNM1-203ENST00000459799 CCDC180Q9P1Z9 1646 aa21.61■■□□□ 1.05
SCNM1-203ENST00000459799 DNAJC5BQ9UF47 199 aa21.23■□□□□ 0.99
SCNM1-203ENST00000459799 RB1CC1Q8TDY2 1594 aa20.79■□□□□ 0.92
SCNM1-203ENST00000459799 NACADO15069 1562 aa20.49■□□□□ 0.87
SCNM1-203ENST00000459799 UNC13AQ9UPW8 1703 aa20.44■□□□□ 0.86
SCNM1-203ENST00000459799 CHIC1Q5VXU3 224 aa20.39■□□□□ 0.85
SCNM1-203ENST00000459799 PABPN1Q86U42 306 aaKnown RBP eCLIP20.38■□□□□ 0.85
SCNM1-203ENST00000459799 BICRAQ9NZM4 1560 aa20.28■□□□□ 0.84
SCNM1-203ENST00000459799 MYO15BQ96JP2 1530 aa20.03■□□□□ 0.8
SCNM1-203ENST00000459799 DCAF8L2P0C7V8 631 aa20.03■□□□□ 0.8
SCNM1-203ENST00000459799 CC2D2AQ9P2K1 1620 aa19.98■□□□□ 0.79
SCNM1-203ENST00000459799 CECR2Q9BXF3 1484 aa19.96■□□□□ 0.79
SCNM1-203ENST00000459799 DNAJC5Q9H3Z4 198 aa19.91■□□□□ 0.78
SCNM1-203ENST00000459799 SHROOM4Q9ULL8 1493 aa19.91■□□□□ 0.78
SCNM1-203ENST00000459799 EIF4G1Q04637 1599 aaKnown RBP19.79■□□□□ 0.76
SCNM1-203ENST00000459799 SCRIBQ14160 1630 aa19.61■□□□□ 0.73
SCNM1-203ENST00000459799 DCAF1Q9Y4B6 1507 aa19.55■□□□□ 0.72
SCNM1-203ENST00000459799 ZCCHC6Q5VYS8 1495 aaKnown RBP19.54■□□□□ 0.72
SCNM1-203ENST00000459799 CUX2O14529 1486 aa19.32■□□□□ 0.68
SCNM1-203ENST00000459799 ERCC6Q03468 1493 aa19.09■□□□□ 0.65
SCNM1-203ENST00000459799 NCAPD3P42695 1498 aa18.9■□□□□ 0.62
SCNM1-203ENST00000459799 THOC2Q8NI27 1593 aaKnown RBP18.85■□□□□ 0.61
SCNM1-203ENST00000459799 NESP48681 1621 aa18.83■□□□□ 0.61
SCNM1-203ENST00000459799 HMGXB3Q12766 1538 aa18.77■□□□□ 0.6
SCNM1-203ENST00000459799 ATAD2BQ9ULI0 1458 aa18.77■□□□□ 0.59
SCNM1-203ENST00000459799 TRIM41Q8WV44 630 aa18.74■□□□□ 0.59
SCNM1-203ENST00000459799 SENP3Q9H4L4 574 aaPredicted RBP18.72■□□□□ 0.59
SCNM1-203ENST00000459799 SMARCA2P51531 1590 aa18.69■□□□□ 0.58
SCNM1-203ENST00000459799 SMARCA4P51532 1647 aa18.66■□□□□ 0.58
SCNM1-203ENST00000459799 KIF21AQ7Z4S6 1674 aa18.64■□□□□ 0.57
SCNM1-203ENST00000459799 LAMC3Q9Y6N6 1575 aa18.62■□□□□ 0.57
SCNM1-203ENST00000459799 BAZ1BQ9UIG0 1483 aaKnown RBP18.55■□□□□ 0.56
SCNM1-203ENST00000459799 PEG3Q9GZU2 1588 aa18.49■□□□□ 0.55
SCNM1-203ENST00000459799 BAZ1AQ9NRL2 1556 aaPredicted RBP18.45■□□□□ 0.54
SCNM1-203ENST00000459799 PDS5BQ9NTI5 1447 aa18.44■□□□□ 0.54
SCNM1-203ENST00000459799 PHF23Q9BUL5 403 aaPredicted RBP18.42■□□□□ 0.54
SCNM1-203ENST00000459799 WDR62O43379 1518 aa18.41■□□□□ 0.54
SCNM1-203ENST00000459799 MRC2Q9UBG0 1479 aa18.39■□□□□ 0.53
SCNM1-203ENST00000459799 CADPSQ9ULU8 1353 aa18.26■□□□□ 0.51
SCNM1-203ENST00000459799 MROH2BQ7Z745 1585 aa18.25■□□□□ 0.51
SCNM1-203ENST00000459799 RIMBP3CA6NJZ7 1639 aa18.2■□□□□ 0.5
SCNM1-203ENST00000459799 RIMBP3BA6NNM3 1639 aa18.2■□□□□ 0.5
SCNM1-203ENST00000459799 RIMBP3Q9UFD9 1639 aa18.2■□□□□ 0.5
SCNM1-203ENST00000459799 OSCARQ8IYS5 282 aa18.2■□□□□ 0.5
SCNM1-203ENST00000459799 CEP164Q9UPV0 1460 aa18.18■□□□□ 0.5
SCNM1-203ENST00000459799 FANCD2Q9BXW9 1451 aa18.09■□□□□ 0.49
SCNM1-203ENST00000459799 ARHGEF11O15085 1522 aa18.06■□□□□ 0.48
SCNM1-203ENST00000459799 URB2Q14146 1524 aaKnown RBP18.03■□□□□ 0.48
SCNM1-203ENST00000459799 WIZO95785 1651 aa18.03■□□□□ 0.48
SCNM1-203ENST00000459799 CFTRP13569 1480 aa17.97■□□□□ 0.47
SCNM1-203ENST00000459799 ZNF608Q9ULD9 1512 aaPredicted RBP17.88■□□□□ 0.45
SCNM1-203ENST00000459799 PRDM2Q13029 1718 aa17.87■□□□□ 0.45
SCNM1-203ENST00000459799 ARAP1Q96P48 1450 aa17.84■□□□□ 0.45
SCNM1-203ENST00000459799 IFT140Q96RY7 1462 aa17.82■□□□□ 0.44
SCNM1-203ENST00000459799 CHD1O14646 1710 aa17.82■□□□□ 0.44
SCNM1-203ENST00000459799 EIF4G3O43432 1585 aaKnown RBP17.82■□□□□ 0.44
SCNM1-203ENST00000459799 CYB5RLQ6IPT4 315 aa17.8■□□□□ 0.44
SCNM1-203ENST00000459799 TRHP20396 242 aaPredicted RBP17.78■□□□□ 0.44
SCNM1-203ENST00000459799 TOP2AP11388 1531 aaKnown RBP17.75■□□□□ 0.43
SCNM1-203ENST00000459799 RSF1Q96T23 1441 aaPredicted RBP17.72■□□□□ 0.43
SCNM1-203ENST00000459799 TOPBP1Q92547 1522 aa17.7■□□□□ 0.42
SCNM1-203ENST00000459799 TARBP1Q13395 1621 aaKnown RBP17.65■□□□□ 0.42
SCNM1-203ENST00000459799 DNMBPQ6XZF7 1577 aa17.61■□□□□ 0.41
SCNM1-203ENST00000459799 AQRO60306 1485 aaKnown RBP eCLIP17.6■□□□□ 0.41
SCNM1-203ENST00000459799 CLASP1Q7Z460 1538 aa17.57■□□□□ 0.4
SCNM1-203ENST00000459799 FOXD1Q16676 465 aa17.56■□□□□ 0.4
SCNM1-203ENST00000459799 ABCC8Q09428 1581 aa17.56■□□□□ 0.4
SCNM1-203ENST00000459799 CCDC88BA6NC98 1476 aa17.5■□□□□ 0.39
SCNM1-203ENST00000459799 FBLN2P98095 1184 aa17.49■□□□□ 0.39
SCNM1-203ENST00000459799 POLA1P09884 1462 aaPredicted RBP17.49■□□□□ 0.39
SCNM1-203ENST00000459799 SYNJ1O43426 1573 aa17.45■□□□□ 0.38
SCNM1-203ENST00000459799 SNAPC4Q5SXM2 1469 aa17.44■□□□□ 0.38
SCNM1-203ENST00000459799 WDR97A6NE52 1622 aa17.42■□□□□ 0.38
SCNM1-203ENST00000459799 RAD54L2Q9Y4B4 1467 aa17.4■□□□□ 0.38
SCNM1-203ENST00000459799 TDRD9Q8NDG6 1382 aaKnown RBP17.37■□□□□ 0.37
SCNM1-203ENST00000459799 MAGI1Q96QZ7 1491 aaPredicted RBP17.37■□□□□ 0.37
SCNM1-203ENST00000459799 GAPVD1Q14C86 1478 aa17.36■□□□□ 0.37
SCNM1-203ENST00000459799 SYNJ2O15056 1496 aa17.31■□□□□ 0.36
SCNM1-203ENST00000459799 SOGA1O94964 1423 aa17.31■□□□□ 0.36
SCNM1-203ENST00000459799 CHMP7Q8WUX9 453 aaPredicted RBP17.28■□□□□ 0.36
SCNM1-203ENST00000459799 GRIN2BQ13224 1484 aa17.28■□□□□ 0.36
SCNM1-203ENST00000459799 FGD5Q6ZNL6 1462 aa17.28■□□□□ 0.36
SCNM1-203ENST00000459799 PBRM1Q86U86 1689 aa17.28■□□□□ 0.36
SCNM1-203ENST00000459799 POTEDQ86YR6 584 aa17.27■□□□□ 0.36
SCNM1-203ENST00000459799 KIF13AQ9H1H9 1805 aa17.26■□□□□ 0.35
SCNM1-203ENST00000459799 ERCC6L2Q5T890 1561 aa17.25■□□□□ 0.35
SCNM1-203ENST00000459799 CUX1P39880 1505 aa17.19■□□□□ 0.34
SCNM1-203ENST00000459799 ABCA5Q8WWZ7 1642 aa17.16■□□□□ 0.34
SCNM1-203ENST00000459799 CEP170Q5SW79 1584 aa17.15■□□□□ 0.34
SCNM1-203ENST00000459799 SHROOM2Q13796 1616 aa17.12■□□□□ 0.33
SCNM1-203ENST00000459799 ILDR1Q86SU0 546 aaPredicted RBP17.09■□□□□ 0.33
SCNM1-203ENST00000459799 GRIN2AQ12879 1464 aa17.09■□□□□ 0.33
SCNM1-203ENST00000459799 ADAMTS12P58397 1594 aa17.06■□□□□ 0.32
SCNM1-203ENST00000459799 NUP160Q12769 1436 aa17.06■□□□□ 0.32
SCNM1-203ENST00000459799 ABCA10Q8WWZ4 1543 aa17.06■□□□□ 0.32
SCNM1-203ENST00000459799 DIP2BQ9P265 1576 aa16.99■□□□□ 0.31
SCNM1-203ENST00000459799 KDM4FA0A1W2PPD8 638 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms