RNA–Protein interactions for RNA: ENST00000458709.1

PRAMEF35P-201, Transcript of PRAME family member 35, pseudogene, humanhuman

BASIC

Gene PRAMEF35P, Length 891 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF35P-201ENST00000458709 NISCHQ9Y2I1 1504 aa28.89■■■□□ 2.22
PRAMEF35P-201ENST00000458709 ABCC9O60706 1549 aa26.6■■□□□ 1.85
PRAMEF35P-201ENST00000458709 CCDC180Q9P1Z9 1646 aa26.1■■□□□ 1.77
PRAMEF35P-201ENST00000458709 DNAJC5BQ9UF47 199 aa25.35■■□□□ 1.65
PRAMEF35P-201ENST00000458709 RB1CC1Q8TDY2 1594 aa25.06■■□□□ 1.6
PRAMEF35P-201ENST00000458709 NACADO15069 1562 aa24.77■■□□□ 1.56
PRAMEF35P-201ENST00000458709 PABPN1Q86U42 306 aaKnown RBP eCLIP24.68■■□□□ 1.54
PRAMEF35P-201ENST00000458709 DCAF8L2P0C7V8 631 aa24.56■■□□□ 1.52
PRAMEF35P-201ENST00000458709 UNC13AQ9UPW8 1703 aa24.5■■□□□ 1.51
PRAMEF35P-201ENST00000458709 BICRAQ9NZM4 1560 aa24.39■■□□□ 1.5
PRAMEF35P-201ENST00000458709 MYO15BQ96JP2 1530 aa24.28■■□□□ 1.48
PRAMEF35P-201ENST00000458709 CECR2Q9BXF3 1484 aa23.99■■□□□ 1.43
PRAMEF35P-201ENST00000458709 CC2D2AQ9P2K1 1620 aa23.98■■□□□ 1.43
PRAMEF35P-201ENST00000458709 SHROOM4Q9ULL8 1493 aa23.96■■□□□ 1.43
PRAMEF35P-201ENST00000458709 ZCCHC6Q5VYS8 1495 aaKnown RBP23.87■■□□□ 1.41
PRAMEF35P-201ENST00000458709 EIF4G1Q04637 1599 aaKnown RBP23.82■■□□□ 1.4
PRAMEF35P-201ENST00000458709 DCAF1Q9Y4B6 1507 aa23.81■■□□□ 1.4
PRAMEF35P-201ENST00000458709 SCRIBQ14160 1630 aa23.81■■□□□ 1.4
PRAMEF35P-201ENST00000458709 DNAJC5Q9H3Z4 198 aa23.55■■□□□ 1.36
PRAMEF35P-201ENST00000458709 CUX2O14529 1486 aa23.06■■□□□ 1.28
PRAMEF35P-201ENST00000458709 CHIC1Q5VXU3 224 aa22.98■■□□□ 1.27
PRAMEF35P-201ENST00000458709 ERCC6Q03468 1493 aa22.97■■□□□ 1.27
PRAMEF35P-201ENST00000458709 NCAPD3P42695 1498 aa22.89■■□□□ 1.25
PRAMEF35P-201ENST00000458709 AEBP2Q6ZN18 517 aaPredicted RBP22.87■■□□□ 1.25
PRAMEF35P-201ENST00000458709 ATAD2BQ9ULI0 1458 aa22.78■■□□□ 1.24
PRAMEF35P-201ENST00000458709 NESP48681 1621 aa22.73■■□□□ 1.23
PRAMEF35P-201ENST00000458709 HMGXB3Q12766 1538 aa22.69■■□□□ 1.22
PRAMEF35P-201ENST00000458709 SMARCA2P51531 1590 aa22.67■■□□□ 1.22
PRAMEF35P-201ENST00000458709 SMARCA4P51532 1647 aa22.64■■□□□ 1.22
PRAMEF35P-201ENST00000458709 THOC2Q8NI27 1593 aaKnown RBP22.58■■□□□ 1.2
PRAMEF35P-201ENST00000458709 BAZ1BQ9UIG0 1483 aaKnown RBP22.54■■□□□ 1.2
PRAMEF35P-201ENST00000458709 BAZ1AQ9NRL2 1556 aaPredicted RBP22.44■■□□□ 1.18
PRAMEF35P-201ENST00000458709 LAMC3Q9Y6N6 1575 aa22.44■■□□□ 1.18
PRAMEF35P-201ENST00000458709 PEG3Q9GZU2 1588 aa22.41■■□□□ 1.18
PRAMEF35P-201ENST00000458709 KIF21AQ7Z4S6 1674 aa22.39■■□□□ 1.17
PRAMEF35P-201ENST00000458709 TRIM41Q8WV44 630 aa22.37■■□□□ 1.17
PRAMEF35P-201ENST00000458709 PDS5BQ9NTI5 1447 aa22.31■■□□□ 1.16
PRAMEF35P-201ENST00000458709 MROH2BQ7Z745 1585 aa22.29■■□□□ 1.16
PRAMEF35P-201ENST00000458709 MRC2Q9UBG0 1479 aa22.18■■□□□ 1.14
PRAMEF35P-201ENST00000458709 CADPSQ9ULU8 1353 aa22.18■■□□□ 1.14
PRAMEF35P-201ENST00000458709 WDR62O43379 1518 aa22.15■■□□□ 1.14
PRAMEF35P-201ENST00000458709 CEP164Q9UPV0 1460 aa22■■□□□ 1.11
PRAMEF35P-201ENST00000458709 WIZO95785 1651 aa21.98■■□□□ 1.11
PRAMEF35P-201ENST00000458709 FANCD2Q9BXW9 1451 aa21.95■■□□□ 1.1
PRAMEF35P-201ENST00000458709 OSCARQ8IYS5 282 aa21.9■■□□□ 1.1
PRAMEF35P-201ENST00000458709 CFTRP13569 1480 aa21.83■■□□□ 1.09
PRAMEF35P-201ENST00000458709 URB2Q14146 1524 aaKnown RBP21.81■■□□□ 1.08
PRAMEF35P-201ENST00000458709 RIMBP3CA6NJZ7 1639 aa21.73■■□□□ 1.07
PRAMEF35P-201ENST00000458709 RIMBP3BA6NNM3 1639 aa21.73■■□□□ 1.07
PRAMEF35P-201ENST00000458709 RIMBP3Q9UFD9 1639 aa21.73■■□□□ 1.07
PRAMEF35P-201ENST00000458709 TOP2AP11388 1531 aaKnown RBP21.67■■□□□ 1.06
PRAMEF35P-201ENST00000458709 RSF1Q96T23 1441 aaPredicted RBP21.64■■□□□ 1.06
PRAMEF35P-201ENST00000458709 ZNF608Q9ULD9 1512 aaPredicted RBP21.63■■□□□ 1.05
PRAMEF35P-201ENST00000458709 ARHGEF11O15085 1522 aa21.62■■□□□ 1.05
PRAMEF35P-201ENST00000458709 IFT140Q96RY7 1462 aa21.57■■□□□ 1.04
PRAMEF35P-201ENST00000458709 PRDM2Q13029 1718 aa21.54■■□□□ 1.04
PRAMEF35P-201ENST00000458709 TOPBP1Q92547 1522 aa21.49■■□□□ 1.03
PRAMEF35P-201ENST00000458709 EIF4G3O43432 1585 aaKnown RBP21.47■■□□□ 1.03
PRAMEF35P-201ENST00000458709 CYB5RLQ6IPT4 315 aa21.46■■□□□ 1.03
PRAMEF35P-201ENST00000458709 CCDC88BA6NC98 1476 aa21.43■■□□□ 1.02
PRAMEF35P-201ENST00000458709 ARAP1Q96P48 1450 aa21.39■■□□□ 1.01
PRAMEF35P-201ENST00000458709 CHD1O14646 1710 aa21.38■■□□□ 1.01
PRAMEF35P-201ENST00000458709 TRHP20396 242 aaPredicted RBP21.36■■□□□ 1.01
PRAMEF35P-201ENST00000458709 DNMBPQ6XZF7 1577 aa21.36■■□□□ 1.01
PRAMEF35P-201ENST00000458709 AQRO60306 1485 aaKnown RBP eCLIP21.35■■□□□ 1.01
PRAMEF35P-201ENST00000458709 ABCC8Q09428 1581 aa21.34■■□□□ 1.01
PRAMEF35P-201ENST00000458709 TARBP1Q13395 1621 aaKnown RBP21.32■■□□□ 1
PRAMEF35P-201ENST00000458709 FBLN2P98095 1184 aa21.28■■□□□ 1
PRAMEF35P-201ENST00000458709 POLA1P09884 1462 aaPredicted RBP21.24■□□□□ 0.99
PRAMEF35P-201ENST00000458709 RAD54L2Q9Y4B4 1467 aa21.19■□□□□ 0.98
PRAMEF35P-201ENST00000458709 TDRD9Q8NDG6 1382 aaKnown RBP21.15■□□□□ 0.98
PRAMEF35P-201ENST00000458709 CLASP1Q7Z460 1538 aa21.14■□□□□ 0.97
PRAMEF35P-201ENST00000458709 SNAPC4Q5SXM2 1469 aa21.13■□□□□ 0.97
PRAMEF35P-201ENST00000458709 SOGA1O94964 1423 aa21.11■□□□□ 0.97
PRAMEF35P-201ENST00000458709 SYNJ1O43426 1573 aa21.06■□□□□ 0.96
PRAMEF35P-201ENST00000458709 FGD5Q6ZNL6 1462 aa21.05■□□□□ 0.96
PRAMEF35P-201ENST00000458709 MAGI1Q96QZ7 1491 aaPredicted RBP21.03■□□□□ 0.96
PRAMEF35P-201ENST00000458709 CHMP7Q8WUX9 453 aaPredicted RBP21.03■□□□□ 0.96
PRAMEF35P-201ENST00000458709 WDR97A6NE52 1622 aa21.02■□□□□ 0.96
PRAMEF35P-201ENST00000458709 GRIN2BQ13224 1484 aa20.98■□□□□ 0.95
PRAMEF35P-201ENST00000458709 SYNJ2O15056 1496 aa20.97■□□□□ 0.95
PRAMEF35P-201ENST00000458709 CUX1P39880 1505 aa20.96■□□□□ 0.95
PRAMEF35P-201ENST00000458709 GAPVD1Q14C86 1478 aa20.94■□□□□ 0.94
PRAMEF35P-201ENST00000458709 PBRM1Q86U86 1689 aa20.86■□□□□ 0.93
PRAMEF35P-201ENST00000458709 ERCC6L2Q5T890 1561 aa20.8■□□□□ 0.92
PRAMEF35P-201ENST00000458709 ABCA5Q8WWZ7 1642 aa20.78■□□□□ 0.92
PRAMEF35P-201ENST00000458709 ABCA10Q8WWZ4 1543 aa20.77■□□□□ 0.92
PRAMEF35P-201ENST00000458709 GRIN2AQ12879 1464 aa20.73■□□□□ 0.91
PRAMEF35P-201ENST00000458709 CEP170Q5SW79 1584 aa20.7■□□□□ 0.9
PRAMEF35P-201ENST00000458709 NUP160Q12769 1436 aa20.68■□□□□ 0.9
PRAMEF35P-201ENST00000458709 ADAMTS12P58397 1594 aa20.68■□□□□ 0.9
PRAMEF35P-201ENST00000458709 SHROOM2Q13796 1616 aa20.63■□□□□ 0.89
PRAMEF35P-201ENST00000458709 KIF13AQ9H1H9 1805 aa20.59■□□□□ 0.89
PRAMEF35P-201ENST00000458709 WRNQ14191 1432 aaPredicted RBP eCLIP20.58■□□□□ 0.88
PRAMEF35P-201ENST00000458709 FHAD1B1AJZ9 1412 aa20.56■□□□□ 0.88
PRAMEF35P-201ENST00000458709 PRG4Q92954 1404 aaPredicted RBP20.51■□□□□ 0.87
PRAMEF35P-201ENST00000458709 TOP2BQ02880 1626 aa20.48■□□□□ 0.87
PRAMEF35P-201ENST00000458709 BIVM-ERCC5R4GMW8 1640 aa20.48■□□□□ 0.87
PRAMEF35P-201ENST00000458709 ERICH3Q5RHP9 1530 aa20.48■□□□□ 0.87
PRAMEF35P-201ENST00000458709 ABCC10Q5T3U5 1492 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms