RNA–Protein interactions for RNA: ENST00000458554.5

AP000347.1-204, humanhuman

TSL 3

Gene AP000347.1, Length 438 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000347.1-204ENST00000458554 AEBP2Q6ZN18 517 aaPredicted RBP37.21■■■■□ 3.55
AP000347.1-204ENST00000458554 CHIC1Q5VXU3 224 aa35.55■■■■□ 3.28
AP000347.1-204ENST00000458554 NISCHQ9Y2I1 1504 aa35.15■■■■□ 3.22
AP000347.1-204ENST00000458554 SENP3Q9H4L4 574 aaPredicted RBP31.63■■■□□ 2.65
AP000347.1-204ENST00000458554 ABCC9O60706 1549 aa31.63■■■□□ 2.65
AP000347.1-204ENST00000458554 CCDC180Q9P1Z9 1646 aa31.42■■■□□ 2.62
AP000347.1-204ENST00000458554 PHF23Q9BUL5 403 aaPredicted RBP31.29■■■□□ 2.6
AP000347.1-204ENST00000458554 RB1CC1Q8TDY2 1594 aa30.02■■■□□ 2.4
AP000347.1-204ENST00000458554 DCAF8L2P0C7V8 631 aa29.86■■■□□ 2.37
AP000347.1-204ENST00000458554 NACADO15069 1562 aa29.81■■■□□ 2.36
AP000347.1-204ENST00000458554 DNAJC5BQ9UF47 199 aa29.78■■■□□ 2.36
AP000347.1-204ENST00000458554 PABPN1Q86U42 306 aaKnown RBP eCLIP29.53■■■□□ 2.32
AP000347.1-204ENST00000458554 FOXD1Q16676 465 aa29.5■■■□□ 2.31
AP000347.1-204ENST00000458554 MYO15BQ96JP2 1530 aa29.4■■■□□ 2.3
AP000347.1-204ENST00000458554 UNC13AQ9UPW8 1703 aa29.16■■■□□ 2.26
AP000347.1-204ENST00000458554 BICRAQ9NZM4 1560 aa29.13■■■□□ 2.25
AP000347.1-204ENST00000458554 ZCCHC6Q5VYS8 1495 aaKnown RBP29.1■■■□□ 2.25
AP000347.1-204ENST00000458554 DCAF1Q9Y4B6 1507 aa29■■■□□ 2.23
AP000347.1-204ENST00000458554 SHROOM4Q9ULL8 1493 aa28.75■■■□□ 2.19
AP000347.1-204ENST00000458554 SCRIBQ14160 1630 aa28.7■■■□□ 2.19
AP000347.1-204ENST00000458554 CECR2Q9BXF3 1484 aa28.5■■■□□ 2.15
AP000347.1-204ENST00000458554 CC2D2AQ9P2K1 1620 aa28.5■■■□□ 2.15
AP000347.1-204ENST00000458554 PLPPR3Q6T4P5 718 aa28.48■■■□□ 2.15
AP000347.1-204ENST00000458554 EIF4G1Q04637 1599 aaKnown RBP28.43■■■□□ 2.14
AP000347.1-204ENST00000458554 PPP6R1Q9UPN7 881 aa27.8■■■□□ 2.04
AP000347.1-204ENST00000458554 ADRA2BP18089 450 aa27.7■■■□□ 2.02
AP000347.1-204ENST00000458554 NCAPD3P42695 1498 aa27.59■■■□□ 2.01
AP000347.1-204ENST00000458554 PIAS4Q8N2W9 510 aaPredicted RBP27.58■■■□□ 2.01
AP000347.1-204ENST00000458554 ATAD2BQ9ULI0 1458 aa27.49■■□□□ 1.99
AP000347.1-204ENST00000458554 MSH5O43196 834 aa27.45■■□□□ 1.98
AP000347.1-204ENST00000458554 DNAJC5Q9H3Z4 198 aa27.38■■□□□ 1.97
AP000347.1-204ENST00000458554 SMARCA4P51532 1647 aa27.37■■□□□ 1.97
AP000347.1-204ENST00000458554 SMARCA2P51531 1590 aa27.36■■□□□ 1.97
AP000347.1-204ENST00000458554 ERCC6Q03468 1493 aa27.32■■□□□ 1.96
AP000347.1-204ENST00000458554 HMGXB3Q12766 1538 aa27.3■■□□□ 1.96
AP000347.1-204ENST00000458554 BAZ1AQ9NRL2 1556 aaPredicted RBP27.26■■□□□ 1.96
AP000347.1-204ENST00000458554 CUX2O14529 1486 aa27.25■■□□□ 1.95
AP000347.1-204ENST00000458554 BAZ1BQ9UIG0 1483 aaKnown RBP27.21■■□□□ 1.95
AP000347.1-204ENST00000458554 NESP48681 1621 aa27.14■■□□□ 1.94
AP000347.1-204ENST00000458554 PEG3Q9GZU2 1588 aa27.11■■□□□ 1.93
AP000347.1-204ENST00000458554 MROH2BQ7Z745 1585 aa27.09■■□□□ 1.93
AP000347.1-204ENST00000458554 LAMC3Q9Y6N6 1575 aa26.89■■□□□ 1.9
AP000347.1-204ENST00000458554 PDS5BQ9NTI5 1447 aa26.84■■□□□ 1.89
AP000347.1-204ENST00000458554 CADPSQ9ULU8 1353 aa26.78■■□□□ 1.88
AP000347.1-204ENST00000458554 THOC2Q8NI27 1593 aaKnown RBP26.77■■□□□ 1.88
AP000347.1-204ENST00000458554 WIZO95785 1651 aa26.7■■□□□ 1.86
AP000347.1-204ENST00000458554 KIF21AQ7Z4S6 1674 aa26.65■■□□□ 1.86
AP000347.1-204ENST00000458554 RSF1Q96T23 1441 aaPredicted RBP26.56■■□□□ 1.84
AP000347.1-204ENST00000458554 MRC2Q9UBG0 1479 aa26.55■■□□□ 1.84
AP000347.1-204ENST00000458554 WDR62O43379 1518 aa26.45■■□□□ 1.83
AP000347.1-204ENST00000458554 CEP164Q9UPV0 1460 aa26.45■■□□□ 1.82
AP000347.1-204ENST00000458554 CFTRP13569 1480 aa26.43■■□□□ 1.82
AP000347.1-204ENST00000458554 FANCD2Q9BXW9 1451 aa26.43■■□□□ 1.82
AP000347.1-204ENST00000458554 POTEDQ86YR6 584 aa26.41■■□□□ 1.82
AP000347.1-204ENST00000458554 TOP2AP11388 1531 aaKnown RBP26.39■■□□□ 1.81
AP000347.1-204ENST00000458554 URB2Q14146 1524 aaKnown RBP26.19■■□□□ 1.78
AP000347.1-204ENST00000458554 TRIM41Q8WV44 630 aa26.18■■□□□ 1.78
AP000347.1-204ENST00000458554 CCDC88BA6NC98 1476 aa26.16■■□□□ 1.78
AP000347.1-204ENST00000458554 OSCARQ8IYS5 282 aa26.12■■□□□ 1.77
AP000347.1-204ENST00000458554 IFT140Q96RY7 1462 aa25.93■■□□□ 1.74
AP000347.1-204ENST00000458554 PRDM2Q13029 1718 aa25.91■■□□□ 1.74
AP000347.1-204ENST00000458554 TOPBP1Q92547 1522 aa25.9■■□□□ 1.74
AP000347.1-204ENST00000458554 ZNF608Q9ULD9 1512 aaPredicted RBP25.9■■□□□ 1.74
AP000347.1-204ENST00000458554 ABCC8Q09428 1581 aa25.87■■□□□ 1.73
AP000347.1-204ENST00000458554 DNMBPQ6XZF7 1577 aa25.77■■□□□ 1.72
AP000347.1-204ENST00000458554 AQRO60306 1485 aaKnown RBP eCLIP25.7■■□□□ 1.7
AP000347.1-204ENST00000458554 EIF4G3O43432 1585 aaKnown RBP25.66■■□□□ 1.7
AP000347.1-204ENST00000458554 POLA1P09884 1462 aaPredicted RBP25.65■■□□□ 1.7
AP000347.1-204ENST00000458554 TARBP1Q13395 1621 aaKnown RBP25.63■■□□□ 1.69
AP000347.1-204ENST00000458554 FBLN2P98095 1184 aa25.62■■□□□ 1.69
AP000347.1-204ENST00000458554 RIMBP3CA6NJZ7 1639 aa25.6■■□□□ 1.69
AP000347.1-204ENST00000458554 RIMBP3BA6NNM3 1639 aa25.6■■□□□ 1.69
AP000347.1-204ENST00000458554 RIMBP3Q9UFD9 1639 aa25.6■■□□□ 1.69
AP000347.1-204ENST00000458554 SOGA1O94964 1423 aa25.6■■□□□ 1.69
AP000347.1-204ENST00000458554 RAD54L2Q9Y4B4 1467 aa25.58■■□□□ 1.69
AP000347.1-204ENST00000458554 ARHGEF11O15085 1522 aa25.57■■□□□ 1.68
AP000347.1-204ENST00000458554 TDRD9Q8NDG6 1382 aaKnown RBP25.56■■□□□ 1.68
AP000347.1-204ENST00000458554 CYB5RLQ6IPT4 315 aa25.52■■□□□ 1.68
AP000347.1-204ENST00000458554 FGD5Q6ZNL6 1462 aa25.48■■□□□ 1.67
AP000347.1-204ENST00000458554 SUPT5HO00267 1087 aaKnown RBP25.45■■□□□ 1.66
AP000347.1-204ENST00000458554 CUX1P39880 1505 aa25.43■■□□□ 1.66
AP000347.1-204ENST00000458554 CHD1O14646 1710 aa25.41■■□□□ 1.66
AP000347.1-204ENST00000458554 CHMP7Q8WUX9 453 aaPredicted RBP25.41■■□□□ 1.66
AP000347.1-204ENST00000458554 MAPK8IP2Q13387 824 aaPredicted RBP25.39■■□□□ 1.66
AP000347.1-204ENST00000458554 SNAPC4Q5SXM2 1469 aa25.39■■□□□ 1.65
AP000347.1-204ENST00000458554 WDR97A6NE52 1622 aa25.34■■□□□ 1.65
AP000347.1-204ENST00000458554 GRIN2BQ13224 1484 aa25.34■■□□□ 1.65
AP000347.1-204ENST00000458554 ARAP1Q96P48 1450 aa25.32■■□□□ 1.64
AP000347.1-204ENST00000458554 MAGI1Q96QZ7 1491 aaPredicted RBP25.32■■□□□ 1.64
AP000347.1-204ENST00000458554 SCAF1Q9H7N4 1312 aaKnown RBP25.28■■□□□ 1.64
AP000347.1-204ENST00000458554 TRHP20396 242 aaPredicted RBP25.25■■□□□ 1.63
AP000347.1-204ENST00000458554 SYNJ2O15056 1496 aa25.25■■□□□ 1.63
AP000347.1-204ENST00000458554 GAPVD1Q14C86 1478 aa25.24■■□□□ 1.63
AP000347.1-204ENST00000458554 SYNJ1O43426 1573 aa25.21■■□□□ 1.63
AP000347.1-204ENST00000458554 CLASP1Q7Z460 1538 aa25.21■■□□□ 1.63
AP000347.1-204ENST00000458554 ABCA10Q8WWZ4 1543 aa25.19■■□□□ 1.62
AP000347.1-204ENST00000458554 DMRT2Q9Y5R5 561 aa25.15■■□□□ 1.62
AP000347.1-204ENST00000458554 WRNQ14191 1432 aaPredicted RBP eCLIP25.14■■□□□ 1.62
AP000347.1-204ENST00000458554 ABCA5Q8WWZ7 1642 aa25.08■■□□□ 1.6
AP000347.1-204ENST00000458554 PBRM1Q86U86 1689 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms