RNA–Protein interactions for RNA: ENST00000458085.6

CAPN13-203, Transcript of calpain 13, humanhuman

TSL 5

Gene CAPN13, Length 2,269 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-203ENST00000458085 NISCHQ9Y2I1 1504 aa36.33■■■■□ 3.41
CAPN13-203ENST00000458085 CCDC180Q9P1Z9 1646 aa31.4■■■□□ 2.62
CAPN13-203ENST00000458085 ZCCHC6Q5VYS8 1495 aaKnown RBP30.58■■■□□ 2.49
CAPN13-203ENST00000458085 SHROOM4Q9ULL8 1493 aa30.11■■■□□ 2.41
CAPN13-203ENST00000458085 DCAF8L2P0C7V8 631 aa30.09■■■□□ 2.41
CAPN13-203ENST00000458085 DCAF1Q9Y4B6 1507 aa29.91■■■□□ 2.38
CAPN13-203ENST00000458085 ABCC9O60706 1549 aa29.63■■■□□ 2.33
CAPN13-203ENST00000458085 MYO15BQ96JP2 1530 aa29.39■■■□□ 2.3
CAPN13-203ENST00000458085 NACADO15069 1562 aa29.18■■■□□ 2.26
CAPN13-203ENST00000458085 SCRIBQ14160 1630 aa29.12■■■□□ 2.25
CAPN13-203ENST00000458085 SUPT5HO00267 1087 aaKnown RBP29.1■■■□□ 2.25
CAPN13-203ENST00000458085 RB1CC1Q8TDY2 1594 aa28.88■■■□□ 2.21
CAPN13-203ENST00000458085 UNC13AQ9UPW8 1703 aa28.44■■■□□ 2.14
CAPN13-203ENST00000458085 RSF1Q96T23 1441 aaPredicted RBP28.37■■■□□ 2.13
CAPN13-203ENST00000458085 CECR2Q9BXF3 1484 aa28.34■■■□□ 2.13
CAPN13-203ENST00000458085 MROH2BQ7Z745 1585 aa28.17■■■□□ 2.1
CAPN13-203ENST00000458085 BICRAQ9NZM4 1560 aa28.12■■■□□ 2.09
CAPN13-203ENST00000458085 PABPN1Q86U42 306 aaKnown RBP eCLIP28.09■■■□□ 2.09
CAPN13-203ENST00000458085 BAZ1AQ9NRL2 1556 aaPredicted RBP27.97■■■□□ 2.07
CAPN13-203ENST00000458085 CHIC1Q5VXU3 224 aa27.97■■■□□ 2.07
CAPN13-203ENST00000458085 WIZO95785 1651 aa27.96■■■□□ 2.07
CAPN13-203ENST00000458085 SMARCA4P51532 1647 aa27.86■■■□□ 2.05
CAPN13-203ENST00000458085 TOP2AP11388 1531 aaKnown RBP27.57■■■□□ 2
CAPN13-203ENST00000458085 PEG3Q9GZU2 1588 aa27.43■■□□□ 1.98
CAPN13-203ENST00000458085 SMARCA2P51531 1590 aa27.38■■□□□ 1.97
CAPN13-203ENST00000458085 CCDC88BA6NC98 1476 aa27.37■■□□□ 1.97
CAPN13-203ENST00000458085 ATAD2BQ9ULI0 1458 aa27.33■■□□□ 1.97
CAPN13-203ENST00000458085 EIF4G1Q04637 1599 aaKnown RBP27.29■■□□□ 1.96
CAPN13-203ENST00000458085 TRIM41Q8WV44 630 aa27.22■■□□□ 1.95
CAPN13-203ENST00000458085 BAZ1BQ9UIG0 1483 aaKnown RBP27.18■■□□□ 1.94
CAPN13-203ENST00000458085 LOC105371045A0A1W2PR82 267 aa27.02■■□□□ 1.92
CAPN13-203ENST00000458085 NCAPD3P42695 1498 aa26.98■■□□□ 1.91
CAPN13-203ENST00000458085 ABCC8Q09428 1581 aa26.98■■□□□ 1.91
CAPN13-203ENST00000458085 HMGXB3Q12766 1538 aa26.94■■□□□ 1.9
CAPN13-203ENST00000458085 FAM9AQ8IZU1 332 aaPredicted RBP26.89■■□□□ 1.9
CAPN13-203ENST00000458085 CC2D2AQ9P2K1 1620 aa26.76■■□□□ 1.87
CAPN13-203ENST00000458085 WRNQ14191 1432 aaPredicted RBP eCLIP26.66■■□□□ 1.86
CAPN13-203ENST00000458085 EHMT2Q96KQ7 1210 aa26.6■■□□□ 1.85
CAPN13-203ENST00000458085 SYNJ1O43426 1573 aa26.59■■□□□ 1.85
CAPN13-203ENST00000458085 SOGA1O94964 1423 aa26.54■■□□□ 1.84
CAPN13-203ENST00000458085 CFTRP13569 1480 aa26.51■■□□□ 1.83
CAPN13-203ENST00000458085 RUSC2Q8N2Y8 1516 aa26.46■■□□□ 1.83
CAPN13-203ENST00000458085 TOP2BQ02880 1626 aa26.37■■□□□ 1.81
CAPN13-203ENST00000458085 CADPSQ9ULU8 1353 aa26.36■■□□□ 1.81
CAPN13-203ENST00000458085 EEA1Q15075 1411 aa26.33■■□□□ 1.8
CAPN13-203ENST00000458085 PRDM2Q13029 1718 aa26.32■■□□□ 1.8
CAPN13-203ENST00000458085 BIVM-ERCC5R4GMW8 1640 aa26.32■■□□□ 1.8
CAPN13-203ENST00000458085 CSRNP3Q8WYN3 585 aa26.3■■□□□ 1.8
CAPN13-203ENST00000458085 CUX1P39880 1505 aa26.29■■□□□ 1.8
CAPN13-203ENST00000458085 DNAJC5BQ9UF47 199 aa26.23■■□□□ 1.79
CAPN13-203ENST00000458085 NESP48681 1621 aa26.16■■□□□ 1.78
CAPN13-203ENST00000458085 PCGF6Q9BYE7 350 aa26.09■■□□□ 1.77
CAPN13-203ENST00000458085 FANCD2Q9BXW9 1451 aa26.09■■□□□ 1.77
CAPN13-203ENST00000458085 GOLGA3Q08378 1498 aa26.07■■□□□ 1.76
CAPN13-203ENST00000458085 TNIKQ9UKE5 1360 aa26.06■■□□□ 1.76
CAPN13-203ENST00000458085 UBTFP17480 764 aaKnown RBP26.04■■□□□ 1.76
CAPN13-203ENST00000458085 KIF21BO75037 1637 aa26.04■■□□□ 1.76
CAPN13-203ENST00000458085 CEP164Q9UPV0 1460 aa26.02■■□□□ 1.76
CAPN13-203ENST00000458085 CEP162Q5TB80 1403 aa26.01■■□□□ 1.75
CAPN13-203ENST00000458085 LAMC3Q9Y6N6 1575 aa25.98■■□□□ 1.75
CAPN13-203ENST00000458085 RAPGEF2Q9Y4G8 1499 aa25.96■■□□□ 1.75
CAPN13-203ENST00000458085 FGD5Q6ZNL6 1462 aa25.94■■□□□ 1.74
CAPN13-203ENST00000458085 KIF27Q86VH2 1401 aa25.91■■□□□ 1.74
CAPN13-203ENST00000458085 TRIM26Q12899 539 aaPredicted RBP25.88■■□□□ 1.73
CAPN13-203ENST00000458085 DNMBPQ6XZF7 1577 aa25.86■■□□□ 1.73
CAPN13-203ENST00000458085 PRXQ9BXM0 1461 aa25.86■■□□□ 1.73
CAPN13-203ENST00000458085 TOPBP1Q92547 1522 aa25.85■■□□□ 1.73
CAPN13-203ENST00000458085 CUX2O14529 1486 aa25.84■■□□□ 1.73
CAPN13-203ENST00000458085 PPARGC1BQ86YN6 1023 aaKnown RBP25.8■■□□□ 1.72
CAPN13-203ENST00000458085 PDS5BQ9NTI5 1447 aa25.79■■□□□ 1.72
CAPN13-203ENST00000458085 URB2Q14146 1524 aaKnown RBP25.79■■□□□ 1.72
CAPN13-203ENST00000458085 ERICH3Q5RHP9 1530 aa25.78■■□□□ 1.72
CAPN13-203ENST00000458085 POLA1P09884 1462 aaPredicted RBP25.77■■□□□ 1.72
CAPN13-203ENST00000458085 KIF21AQ7Z4S6 1674 aa25.76■■□□□ 1.71
CAPN13-203ENST00000458085 RAD54L2Q9Y4B4 1467 aa25.76■■□□□ 1.71
CAPN13-203ENST00000458085 IGF1RP08069 1367 aa25.72■■□□□ 1.71
CAPN13-203ENST00000458085 CLIP1P30622 1438 aa25.71■■□□□ 1.71
CAPN13-203ENST00000458085 RANGAP1P46060 587 aaPredicted RBP25.67■■□□□ 1.7
CAPN13-203ENST00000458085 ABCA10Q8WWZ4 1543 aa25.66■■□□□ 1.7
CAPN13-203ENST00000458085 CARMIL1Q5VZK9 1371 aa25.58■■□□□ 1.69
CAPN13-203ENST00000458085 WDR97A6NE52 1622 aa25.55■■□□□ 1.68
CAPN13-203ENST00000458085 HRCP23327 699 aa25.54■■□□□ 1.68
CAPN13-203ENST00000458085 TTBK1Q5TCY1 1321 aaPredicted RBP25.52■■□□□ 1.68
CAPN13-203ENST00000458085 VPS8Q8N3P4 1428 aa25.51■■□□□ 1.67
CAPN13-203ENST00000458085 TDRD9Q8NDG6 1382 aaKnown RBP25.47■■□□□ 1.67
CAPN13-203ENST00000458085 MRC2Q9UBG0 1479 aa25.47■■□□□ 1.67
CAPN13-203ENST00000458085 ARAP1Q96P48 1450 aa25.45■■□□□ 1.67
CAPN13-203ENST00000458085 ABCA5Q8WWZ7 1642 aa25.43■■□□□ 1.66
CAPN13-203ENST00000458085 TARBP1Q13395 1621 aaKnown RBP25.43■■□□□ 1.66
CAPN13-203ENST00000458085 GAPVD1Q14C86 1478 aa25.38■■□□□ 1.65
CAPN13-203ENST00000458085 ARHGAP35Q9NRY4 1499 aa25.38■■□□□ 1.65
CAPN13-203ENST00000458085 CUL7Q14999 1698 aa25.37■■□□□ 1.65
CAPN13-203ENST00000458085 WDR62O43379 1518 aa25.32■■□□□ 1.64
CAPN13-203ENST00000458085 ERCC6Q03468 1493 aa25.29■■□□□ 1.64
CAPN13-203ENST00000458085 AQRO60306 1485 aaKnown RBP eCLIP25.25■■□□□ 1.63
CAPN13-203ENST00000458085 APLP2Q06481 763 aa25.24■■□□□ 1.63
CAPN13-203ENST00000458085 PBRM1Q86U86 1689 aa25.2■■□□□ 1.63
CAPN13-203ENST00000458085 THOC2Q8NI27 1593 aaKnown RBP25.2■■□□□ 1.62
CAPN13-203ENST00000458085 ZNF608Q9ULD9 1512 aaPredicted RBP25.19■■□□□ 1.62
CAPN13-203ENST00000458085 CTTNBP2Q8WZ74 1663 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms