RNA–Protein interactions for RNA: ENST00000458012.2

POLR1B-210, Transcript of RNA polymerase I subunit B, humanhuman

TSL 5

Gene POLR1B, Length 923 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-210ENST00000458012 NISCHQ9Y2I1 1504 aa22.11■■□□□ 1.13
POLR1B-210ENST00000458012 AEBP2Q6ZN18 517 aaPredicted RBP21.8■■□□□ 1.08
POLR1B-210ENST00000458012 CHIC1Q5VXU3 224 aa20.98■□□□□ 0.95
POLR1B-210ENST00000458012 ABCC9O60706 1549 aa19.91■□□□□ 0.78
POLR1B-210ENST00000458012 CCDC180Q9P1Z9 1646 aa19.85■□□□□ 0.77
POLR1B-210ENST00000458012 RB1CC1Q8TDY2 1594 aa18.95■□□□□ 0.62
POLR1B-210ENST00000458012 SENP3Q9H4L4 574 aaPredicted RBP18.92■□□□□ 0.62
POLR1B-210ENST00000458012 DCAF8L2P0C7V8 631 aa18.81■□□□□ 0.6
POLR1B-210ENST00000458012 NACADO15069 1562 aa18.81■□□□□ 0.6
POLR1B-210ENST00000458012 DNAJC5BQ9UF47 199 aa18.68■□□□□ 0.58
POLR1B-210ENST00000458012 PABPN1Q86U42 306 aaKnown RBP eCLIP18.55■□□□□ 0.56
POLR1B-210ENST00000458012 PHF23Q9BUL5 403 aaPredicted RBP18.53■□□□□ 0.56
POLR1B-210ENST00000458012 MYO15BQ96JP2 1530 aa18.52■□□□□ 0.56
POLR1B-210ENST00000458012 UNC13AQ9UPW8 1703 aa18.45■□□□□ 0.54
POLR1B-210ENST00000458012 BICRAQ9NZM4 1560 aa18.32■□□□□ 0.52
POLR1B-210ENST00000458012 ZCCHC6Q5VYS8 1495 aaKnown RBP18.29■□□□□ 0.52
POLR1B-210ENST00000458012 DCAF1Q9Y4B6 1507 aa18.26■□□□□ 0.51
POLR1B-210ENST00000458012 SHROOM4Q9ULL8 1493 aa18.14■□□□□ 0.49
POLR1B-210ENST00000458012 SCRIBQ14160 1630 aa18.08■□□□□ 0.48
POLR1B-210ENST00000458012 CC2D2AQ9P2K1 1620 aa17.96■□□□□ 0.47
POLR1B-210ENST00000458012 CECR2Q9BXF3 1484 aa17.94■□□□□ 0.46
POLR1B-210ENST00000458012 EIF4G1Q04637 1599 aaKnown RBP17.91■□□□□ 0.46
POLR1B-210ENST00000458012 FOXD1Q16676 465 aa17.4■□□□□ 0.38
POLR1B-210ENST00000458012 NCAPD3P42695 1498 aa17.36■□□□□ 0.37
POLR1B-210ENST00000458012 ATAD2BQ9ULI0 1458 aa17.28■□□□□ 0.36
POLR1B-210ENST00000458012 SMARCA2P51531 1590 aa17.26■□□□□ 0.35
POLR1B-210ENST00000458012 DNAJC5Q9H3Z4 198 aa17.24■□□□□ 0.35
POLR1B-210ENST00000458012 SMARCA4P51532 1647 aa17.24■□□□□ 0.35
POLR1B-210ENST00000458012 ERCC6Q03468 1493 aa17.23■□□□□ 0.35
POLR1B-210ENST00000458012 HMGXB3Q12766 1538 aa17.2■□□□□ 0.34
POLR1B-210ENST00000458012 BAZ1AQ9NRL2 1556 aaPredicted RBP17.19■□□□□ 0.34
POLR1B-210ENST00000458012 CUX2O14529 1486 aa17.18■□□□□ 0.34
POLR1B-210ENST00000458012 BAZ1BQ9UIG0 1483 aaKnown RBP17.14■□□□□ 0.33
POLR1B-210ENST00000458012 PEG3Q9GZU2 1588 aa17.07■□□□□ 0.32
POLR1B-210ENST00000458012 NESP48681 1621 aa17.06■□□□□ 0.32
POLR1B-210ENST00000458012 MROH2BQ7Z745 1585 aa17.02■□□□□ 0.31
POLR1B-210ENST00000458012 LAMC3Q9Y6N6 1575 aa16.98■□□□□ 0.31
POLR1B-210ENST00000458012 PLPPR3Q6T4P5 718 aa16.93■□□□□ 0.3
POLR1B-210ENST00000458012 PDS5BQ9NTI5 1447 aa16.92■□□□□ 0.3
POLR1B-210ENST00000458012 THOC2Q8NI27 1593 aaKnown RBP16.87■□□□□ 0.29
POLR1B-210ENST00000458012 CADPSQ9ULU8 1353 aa16.85■□□□□ 0.29
POLR1B-210ENST00000458012 KIF21AQ7Z4S6 1674 aa16.83■□□□□ 0.28
POLR1B-210ENST00000458012 WIZO95785 1651 aa16.81■□□□□ 0.28
POLR1B-210ENST00000458012 MRC2Q9UBG0 1479 aa16.73■□□□□ 0.27
POLR1B-210ENST00000458012 RSF1Q96T23 1441 aaPredicted RBP16.67■□□□□ 0.26
POLR1B-210ENST00000458012 CEP164Q9UPV0 1460 aa16.67■□□□□ 0.26
POLR1B-210ENST00000458012 WDR62O43379 1518 aa16.66■□□□□ 0.26
POLR1B-210ENST00000458012 FANCD2Q9BXW9 1451 aa16.64■□□□□ 0.25
POLR1B-210ENST00000458012 CFTRP13569 1480 aa16.61■□□□□ 0.25
POLR1B-210ENST00000458012 TOP2AP11388 1531 aaKnown RBP16.61■□□□□ 0.25
POLR1B-210ENST00000458012 MSH5O43196 834 aa16.53■□□□□ 0.24
POLR1B-210ENST00000458012 TRIM41Q8WV44 630 aa16.5■□□□□ 0.23
POLR1B-210ENST00000458012 URB2Q14146 1524 aaKnown RBP16.47■□□□□ 0.23
POLR1B-210ENST00000458012 OSCARQ8IYS5 282 aa16.47■□□□□ 0.23
POLR1B-210ENST00000458012 CCDC88BA6NC98 1476 aa16.44■□□□□ 0.22
POLR1B-210ENST00000458012 PRDM2Q13029 1718 aa16.43■□□□□ 0.22
POLR1B-210ENST00000458012 PIAS4Q8N2W9 510 aaPredicted RBP16.43■□□□□ 0.22
POLR1B-210ENST00000458012 IFT140Q96RY7 1462 aa16.35■□□□□ 0.21
POLR1B-210ENST00000458012 ABCC8Q09428 1581 aa16.34■□□□□ 0.21
POLR1B-210ENST00000458012 TOPBP1Q92547 1522 aa16.3■□□□□ 0.2
POLR1B-210ENST00000458012 ZNF608Q9ULD9 1512 aaPredicted RBP16.27■□□□□ 0.2
POLR1B-210ENST00000458012 DNMBPQ6XZF7 1577 aa16.25■□□□□ 0.19
POLR1B-210ENST00000458012 ADRA2BP18089 450 aa16.24■□□□□ 0.19
POLR1B-210ENST00000458012 PPP6R1Q9UPN7 881 aa16.21■□□□□ 0.19
POLR1B-210ENST00000458012 EIF4G3O43432 1585 aaKnown RBP16.17■□□□□ 0.18
POLR1B-210ENST00000458012 AQRO60306 1485 aaKnown RBP eCLIP16.16■□□□□ 0.185e-6■■■□□ 16.9
POLR1B-210ENST00000458012 RIMBP3CA6NJZ7 1639 aa16.16■□□□□ 0.18
POLR1B-210ENST00000458012 RIMBP3BA6NNM3 1639 aa16.16■□□□□ 0.18
POLR1B-210ENST00000458012 RIMBP3Q9UFD9 1639 aa16.16■□□□□ 0.18
POLR1B-210ENST00000458012 FBLN2P98095 1184 aa16.14■□□□□ 0.17
POLR1B-210ENST00000458012 TARBP1Q13395 1621 aaKnown RBP16.14■□□□□ 0.17
POLR1B-210ENST00000458012 POLA1P09884 1462 aaPredicted RBP16.12■□□□□ 0.17
POLR1B-210ENST00000458012 SOGA1O94964 1423 aa16.11■□□□□ 0.17
POLR1B-210ENST00000458012 ARHGEF11O15085 1522 aa16.1■□□□□ 0.17
POLR1B-210ENST00000458012 RAD54L2Q9Y4B4 1467 aa16.08■□□□□ 0.16
POLR1B-210ENST00000458012 CYB5RLQ6IPT4 315 aa16.07■□□□□ 0.16
POLR1B-210ENST00000458012 CHD1O14646 1710 aa16.07■□□□□ 0.16
POLR1B-210ENST00000458012 TDRD9Q8NDG6 1382 aaKnown RBP16.06■□□□□ 0.16
POLR1B-210ENST00000458012 FGD5Q6ZNL6 1462 aa16.03■□□□□ 0.16
POLR1B-210ENST00000458012 WDR97A6NE52 1622 aa16.01■□□□□ 0.15
POLR1B-210ENST00000458012 CHMP7Q8WUX9 453 aaPredicted RBP16.01■□□□□ 0.15
POLR1B-210ENST00000458012 SUPT5HO00267 1087 aaKnown RBP15.99■□□□□ 0.15
POLR1B-210ENST00000458012 CUX1P39880 1505 aa15.99■□□□□ 0.15
POLR1B-210ENST00000458012 SNAPC4Q5SXM2 1469 aa15.97■□□□□ 0.15
POLR1B-210ENST00000458012 GRIN2BQ13224 1484 aa15.96■□□□□ 0.14
POLR1B-210ENST00000458012 MAGI1Q96QZ7 1491 aaPredicted RBP15.96■□□□□ 0.14
POLR1B-210ENST00000458012 TRHP20396 242 aaPredicted RBP15.94■□□□□ 0.14
POLR1B-210ENST00000458012 SYNJ1O43426 1573 aa15.92■□□□□ 0.14
POLR1B-210ENST00000458012 ARAP1Q96P48 1450 aa15.92■□□□□ 0.14
POLR1B-210ENST00000458012 SYNJ2O15056 1496 aa15.9■□□□□ 0.14
POLR1B-210ENST00000458012 GAPVD1Q14C86 1478 aa15.9■□□□□ 0.14
POLR1B-210ENST00000458012 CLASP1Q7Z460 1538 aa15.88■□□□□ 0.13
POLR1B-210ENST00000458012 ABCA10Q8WWZ4 1543 aa15.85■□□□□ 0.13
POLR1B-210ENST00000458012 PBRM1Q86U86 1689 aa15.85■□□□□ 0.13
POLR1B-210ENST00000458012 WRNQ14191 1432 aaPredicted RBP eCLIP15.82■□□□□ 0.12
POLR1B-210ENST00000458012 ABCA5Q8WWZ7 1642 aa15.79■□□□□ 0.12
POLR1B-210ENST00000458012 POTEDQ86YR6 584 aa15.77■□□□□ 0.12
POLR1B-210ENST00000458012 TOP2BQ02880 1626 aa15.74■□□□□ 0.11
POLR1B-210ENST00000458012 GRIN2AQ12879 1464 aa15.73■□□□□ 0.11
POLR1B-210ENST00000458012 BIVM-ERCC5R4GMW8 1640 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms