RNA–Protein interactions for RNA: ENST00000457587.5

PSMC2-204, Transcript of proteasome 26S subunit, ATPase 2, humanhuman

TSL 3

Gene PSMC2, Length 682 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC2-204ENST00000457587 NISCHQ9Y2I1 1504 aa25.81■■□□□ 1.72
PSMC2-204ENST00000457587 CCDC180Q9P1Z9 1646 aa23.06■■□□□ 1.28
PSMC2-204ENST00000457587 ABCC9O60706 1549 aa22.7■■□□□ 1.22
PSMC2-204ENST00000457587 RB1CC1Q8TDY2 1594 aa21.73■■□□□ 1.07
PSMC2-204ENST00000457587 NACADO15069 1562 aa21.65■■□□□ 1.06
PSMC2-204ENST00000457587 DCAF8L2P0C7V8 631 aa21.53■■□□□ 1.04
PSMC2-204ENST00000457587 ZCCHC6Q5VYS8 1495 aaKnown RBP21.5■■□□□ 1.03
PSMC2-204ENST00000457587 MYO15BQ96JP2 1530 aa21.45■■□□□ 1.02
PSMC2-204ENST00000457587 UNC13AQ9UPW8 1703 aa21.38■■□□□ 1.01
PSMC2-204ENST00000457587 DCAF1Q9Y4B6 1507 aa21.32■■□□□ 1
PSMC2-204ENST00000457587 BICRAQ9NZM4 1560 aa21.16■□□□□ 0.98
PSMC2-204ENST00000457587 PABPN1Q86U42 306 aaKnown RBP eCLIP21.14■□□□□ 0.97
PSMC2-204ENST00000457587 SCRIBQ14160 1630 aa21.06■□□□□ 0.96
PSMC2-204ENST00000457587 DNAJC5BQ9UF47 199 aa20.97■□□□□ 0.95
PSMC2-204ENST00000457587 SHROOM4Q9ULL8 1493 aa20.81■□□□□ 0.92
PSMC2-204ENST00000457587 EIF4G1Q04637 1599 aaKnown RBP20.57■□□□□ 0.88
PSMC2-204ENST00000457587 CC2D2AQ9P2K1 1620 aa20.54■□□□□ 0.88
PSMC2-204ENST00000457587 CECR2Q9BXF3 1484 aa20.37■□□□□ 0.85
PSMC2-204ENST00000457587 AEBP2Q6ZN18 517 aaPredicted RBP20.3■□□□□ 0.84
PSMC2-204ENST00000457587 SMARCA4P51532 1647 aa20.1■□□□□ 0.81
PSMC2-204ENST00000457587 BAZ1AQ9NRL2 1556 aaPredicted RBP20■□□□□ 0.79
PSMC2-204ENST00000457587 ATAD2BQ9ULI0 1458 aa19.99■□□□□ 0.79
PSMC2-204ENST00000457587 NCAPD3P42695 1498 aa19.97■□□□□ 0.79
PSMC2-204ENST00000457587 SMARCA2P51531 1590 aa19.94■□□□□ 0.78
PSMC2-204ENST00000457587 MROH2BQ7Z745 1585 aa19.93■□□□□ 0.78
PSMC2-204ENST00000457587 HMGXB3Q12766 1538 aa19.9■□□□□ 0.78
PSMC2-204ENST00000457587 PEG3Q9GZU2 1588 aa19.88■□□□□ 0.77
PSMC2-204ENST00000457587 BAZ1BQ9UIG0 1483 aaKnown RBP19.8■□□□□ 0.76
PSMC2-204ENST00000457587 WIZO95785 1651 aa19.74■□□□□ 0.75
PSMC2-204ENST00000457587 NESP48681 1621 aa19.62■□□□□ 0.73
PSMC2-204ENST00000457587 RSF1Q96T23 1441 aaPredicted RBP19.59■□□□□ 0.73
PSMC2-204ENST00000457587 ERCC6Q03468 1493 aa19.52■□□□□ 0.72
PSMC2-204ENST00000457587 LAMC3Q9Y6N6 1575 aa19.49■□□□□ 0.71
PSMC2-204ENST00000457587 TOP2AP11388 1531 aaKnown RBP19.48■□□□□ 0.71
PSMC2-204ENST00000457587 KIF21AQ7Z4S6 1674 aa19.43■□□□□ 0.7
PSMC2-204ENST00000457587 THOC2Q8NI27 1593 aaKnown RBP19.39■□□□□ 0.69
PSMC2-204ENST00000457587 CUX2O14529 1486 aa19.36■□□□□ 0.69
PSMC2-204ENST00000457587 CADPSQ9ULU8 1353 aa19.35■□□□□ 0.69
PSMC2-204ENST00000457587 PDS5BQ9NTI5 1447 aa19.3■□□□□ 0.68
PSMC2-204ENST00000457587 CFTRP13569 1480 aa19.24■□□□□ 0.67
PSMC2-204ENST00000457587 CCDC88BA6NC98 1476 aa19.22■□□□□ 0.67
PSMC2-204ENST00000457587 PRDM2Q13029 1718 aa19.19■□□□□ 0.66
PSMC2-204ENST00000457587 FANCD2Q9BXW9 1451 aa19.18■□□□□ 0.66
PSMC2-204ENST00000457587 MRC2Q9UBG0 1479 aa19.18■□□□□ 0.66
PSMC2-204ENST00000457587 CEP164Q9UPV0 1460 aa19.17■□□□□ 0.66
PSMC2-204ENST00000457587 WDR62O43379 1518 aa19.15■□□□□ 0.66
PSMC2-204ENST00000457587 CHIC1Q5VXU3 224 aa19.07■□□□□ 0.64
PSMC2-204ENST00000457587 URB2Q14146 1524 aaKnown RBP19.05■□□□□ 0.64
PSMC2-204ENST00000457587 SUPT5HO00267 1087 aaKnown RBP18.94■□□□□ 0.62
PSMC2-204ENST00000457587 DNAJC5Q9H3Z4 198 aa18.92■□□□□ 0.62
PSMC2-204ENST00000457587 TOPBP1Q92547 1522 aa18.89■□□□□ 0.61
PSMC2-204ENST00000457587 DNMBPQ6XZF7 1577 aa18.85■□□□□ 0.61
PSMC2-204ENST00000457587 ABCC8Q09428 1581 aa18.77■□□□□ 0.6
PSMC2-204ENST00000457587 ZNF608Q9ULD9 1512 aaPredicted RBP18.75■□□□□ 0.59
PSMC2-204ENST00000457587 IFT140Q96RY7 1462 aa18.75■□□□□ 0.59
PSMC2-204ENST00000457587 TARBP1Q13395 1621 aaKnown RBP18.72■□□□□ 0.59
PSMC2-204ENST00000457587 CUX1P39880 1505 aa18.71■□□□□ 0.59
PSMC2-204ENST00000457587 POLA1P09884 1462 aaPredicted RBP18.71■□□□□ 0.59
PSMC2-204ENST00000457587 EIF4G3O43432 1585 aaKnown RBP18.7■□□□□ 0.58
PSMC2-204ENST00000457587 FGD5Q6ZNL6 1462 aa18.65■□□□□ 0.58
PSMC2-204ENST00000457587 RAD54L2Q9Y4B4 1467 aa18.65■□□□□ 0.58
PSMC2-204ENST00000457587 AQRO60306 1485 aaKnown RBP eCLIP18.58■□□□□ 0.572e-6■■■■■ 27.1
PSMC2-204ENST00000457587 WDR97A6NE52 1622 aa18.58■□□□□ 0.56
PSMC2-204ENST00000457587 SOGA1O94964 1423 aa18.57■□□□□ 0.56
PSMC2-204ENST00000457587 SYNJ1O43426 1573 aa18.52■□□□□ 0.56
PSMC2-204ENST00000457587 TDRD9Q8NDG6 1382 aaKnown RBP18.52■□□□□ 0.55
PSMC2-204ENST00000457587 BIVM-ERCC5R4GMW8 1640 aa18.52■□□□□ 0.55
PSMC2-204ENST00000457587 CHD1O14646 1710 aa18.52■□□□□ 0.55
PSMC2-204ENST00000457587 TOP2BQ02880 1626 aa18.49■□□□□ 0.55
PSMC2-204ENST00000457587 OSCARQ8IYS5 282 aa18.46■□□□□ 0.55
PSMC2-204ENST00000457587 WRNQ14191 1432 aaPredicted RBP eCLIP18.46■□□□□ 0.55
PSMC2-204ENST00000457587 PBRM1Q86U86 1689 aa18.45■□□□□ 0.54
PSMC2-204ENST00000457587 ABCA5Q8WWZ7 1642 aa18.44■□□□□ 0.54
PSMC2-204ENST00000457587 SNAPC4Q5SXM2 1469 aa18.43■□□□□ 0.54
PSMC2-204ENST00000457587 ABCA10Q8WWZ4 1543 aa18.43■□□□□ 0.54
PSMC2-204ENST00000457587 GRIN2BQ13224 1484 aa18.39■□□□□ 0.53
PSMC2-204ENST00000457587 GAPVD1Q14C86 1478 aa18.37■□□□□ 0.53
PSMC2-204ENST00000457587 MAGI1Q96QZ7 1491 aaPredicted RBP18.36■□□□□ 0.53
PSMC2-204ENST00000457587 RIMBP3CA6NJZ7 1639 aa18.34■□□□□ 0.53
PSMC2-204ENST00000457587 RIMBP3BA6NNM3 1639 aa18.34■□□□□ 0.53
PSMC2-204ENST00000457587 RIMBP3Q9UFD9 1639 aa18.34■□□□□ 0.53
PSMC2-204ENST00000457587 FBLN2P98095 1184 aa18.32■□□□□ 0.52
PSMC2-204ENST00000457587 ARHGEF11O15085 1522 aa18.29■□□□□ 0.52
PSMC2-204ENST00000457587 SYNJ2O15056 1496 aa18.29■□□□□ 0.52
PSMC2-204ENST00000457587 CLASP1Q7Z460 1538 aa18.28■□□□□ 0.52
PSMC2-204ENST00000457587 ADAMTS12P58397 1594 aa18.27■□□□□ 0.52
PSMC2-204ENST00000457587 TRIM41Q8WV44 630 aa18.26■□□□□ 0.51
PSMC2-204ENST00000457587 CHMP7Q8WUX9 453 aaPredicted RBP18.22■□□□□ 0.51
PSMC2-204ENST00000457587 ERICH3Q5RHP9 1530 aa18.2■□□□□ 0.5
PSMC2-204ENST00000457587 GRIN2AQ12879 1464 aa18.19■□□□□ 0.5
PSMC2-204ENST00000457587 CEP170Q5SW79 1584 aa18.16■□□□□ 0.5
PSMC2-204ENST00000457587 FHAD1B1AJZ9 1412 aa18.15■□□□□ 0.5
PSMC2-204ENST00000457587 ARAP1Q96P48 1450 aa18.14■□□□□ 0.5
PSMC2-204ENST00000457587 NUP160Q12769 1436 aa18.1■□□□□ 0.49
PSMC2-204ENST00000457587 KIF27Q86VH2 1401 aa18.06■□□□□ 0.48
PSMC2-204ENST00000457587 ERCC6L2Q5T890 1561 aa18.05■□□□□ 0.48
PSMC2-204ENST00000457587 CYB5RLQ6IPT4 315 aa18.04■□□□□ 0.48
PSMC2-204ENST00000457587 SHROOM2Q13796 1616 aa18.04■□□□□ 0.48
PSMC2-204ENST00000457587 CUL7Q14999 1698 aa18.03■□□□□ 0.48
PSMC2-204ENST00000457587 RUSC2Q8N2Y8 1516 aa18.02■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms