RNA–Protein interactions for RNA: ENST00000457188.6

CMTM1-206, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 765 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-206ENST00000457188 NISCHQ9Y2I1 1504 aa29.05■■■□□ 2.24
CMTM1-206ENST00000457188 ABCC9O60706 1549 aa26.39■■□□□ 1.82
CMTM1-206ENST00000457188 CCDC180Q9P1Z9 1646 aa26.21■■□□□ 1.79
CMTM1-206ENST00000457188 RB1CC1Q8TDY2 1594 aa25.09■■□□□ 1.61
CMTM1-206ENST00000457188 NACADO15069 1562 aa24.84■■□□□ 1.57
CMTM1-206ENST00000457188 DNAJC5BQ9UF47 199 aa24.84■■□□□ 1.57
CMTM1-206ENST00000457188 DCAF8L2P0C7V8 631 aa24.72■■□□□ 1.55
CMTM1-206ENST00000457188 PABPN1Q86U42 306 aaKnown RBP eCLIP24.53■■□□□ 1.52
CMTM1-206ENST00000457188 UNC13AQ9UPW8 1703 aa24.41■■□□□ 1.5
CMTM1-206ENST00000457188 MYO15BQ96JP2 1530 aa24.4■■□□□ 1.5
CMTM1-206ENST00000457188 BICRAQ9NZM4 1560 aa24.23■■□□□ 1.47
CMTM1-206ENST00000457188 SHROOM4Q9ULL8 1493 aa24.03■■□□□ 1.44
CMTM1-206ENST00000457188 ZCCHC6Q5VYS8 1495 aaKnown RBP24.02■■□□□ 1.44
CMTM1-206ENST00000457188 DCAF1Q9Y4B6 1507 aa24■■□□□ 1.43
CMTM1-206ENST00000457188 SCRIBQ14160 1630 aa23.85■■□□□ 1.41
CMTM1-206ENST00000457188 CECR2Q9BXF3 1484 aa23.83■■□□□ 1.41
CMTM1-206ENST00000457188 CC2D2AQ9P2K1 1620 aa23.83■■□□□ 1.41
CMTM1-206ENST00000457188 EIF4G1Q04637 1599 aaKnown RBP23.74■■□□□ 1.39
CMTM1-206ENST00000457188 DNAJC5Q9H3Z4 198 aa23.08■■□□□ 1.29
CMTM1-206ENST00000457188 ERCC6Q03468 1493 aa22.91■■□□□ 1.26
CMTM1-206ENST00000457188 CUX2O14529 1486 aa22.9■■□□□ 1.26
CMTM1-206ENST00000457188 NCAPD3P42695 1498 aa22.9■■□□□ 1.26
CMTM1-206ENST00000457188 ATAD2BQ9ULI0 1458 aa22.79■■□□□ 1.24
CMTM1-206ENST00000457188 SMARCA2P51531 1590 aa22.78■■□□□ 1.24
CMTM1-206ENST00000457188 HMGXB3Q12766 1538 aa22.73■■□□□ 1.23
CMTM1-206ENST00000457188 SMARCA4P51532 1647 aa22.72■■□□□ 1.23
CMTM1-206ENST00000457188 BAZ1BQ9UIG0 1483 aaKnown RBP22.62■■□□□ 1.21
CMTM1-206ENST00000457188 BAZ1AQ9NRL2 1556 aaPredicted RBP22.62■■□□□ 1.21
CMTM1-206ENST00000457188 NESP48681 1621 aa22.57■■□□□ 1.2
CMTM1-206ENST00000457188 PEG3Q9GZU2 1588 aa22.49■■□□□ 1.19
CMTM1-206ENST00000457188 LAMC3Q9Y6N6 1575 aa22.46■■□□□ 1.19
CMTM1-206ENST00000457188 THOC2Q8NI27 1593 aaKnown RBP22.41■■□□□ 1.18
CMTM1-206ENST00000457188 PDS5BQ9NTI5 1447 aa22.38■■□□□ 1.17
CMTM1-206ENST00000457188 MROH2BQ7Z745 1585 aa22.34■■□□□ 1.17
CMTM1-206ENST00000457188 KIF21AQ7Z4S6 1674 aa22.3■■□□□ 1.16
CMTM1-206ENST00000457188 CADPSQ9ULU8 1353 aa22.22■■□□□ 1.15
CMTM1-206ENST00000457188 MRC2Q9UBG0 1479 aa22.15■■□□□ 1.14
CMTM1-206ENST00000457188 WIZO95785 1651 aa22.08■■□□□ 1.13
CMTM1-206ENST00000457188 WDR62O43379 1518 aa22.08■■□□□ 1.13
CMTM1-206ENST00000457188 TRIM41Q8WV44 630 aa22.05■■□□□ 1.12
CMTM1-206ENST00000457188 CEP164Q9UPV0 1460 aa22.04■■□□□ 1.12
CMTM1-206ENST00000457188 FANCD2Q9BXW9 1451 aa21.97■■□□□ 1.11
CMTM1-206ENST00000457188 CFTRP13569 1480 aa21.9■■□□□ 1.1
CMTM1-206ENST00000457188 OSCARQ8IYS5 282 aa21.83■■□□□ 1.09
CMTM1-206ENST00000457188 TOP2AP11388 1531 aaKnown RBP21.83■■□□□ 1.09
CMTM1-206ENST00000457188 RSF1Q96T23 1441 aaPredicted RBP21.81■■□□□ 1.08
CMTM1-206ENST00000457188 URB2Q14146 1524 aaKnown RBP21.75■■□□□ 1.07
CMTM1-206ENST00000457188 PRDM2Q13029 1718 aa21.69■■□□□ 1.06
CMTM1-206ENST00000457188 IFT140Q96RY7 1462 aa21.6■■□□□ 1.05
CMTM1-206ENST00000457188 CCDC88BA6NC98 1476 aa21.56■■□□□ 1.04
CMTM1-206ENST00000457188 ABCC8Q09428 1581 aa21.53■■□□□ 1.04
CMTM1-206ENST00000457188 RIMBP3CA6NJZ7 1639 aa21.51■■□□□ 1.03
CMTM1-206ENST00000457188 RIMBP3BA6NNM3 1639 aa21.51■■□□□ 1.03
CMTM1-206ENST00000457188 RIMBP3Q9UFD9 1639 aa21.51■■□□□ 1.03
CMTM1-206ENST00000457188 TOPBP1Q92547 1522 aa21.5■■□□□ 1.03
CMTM1-206ENST00000457188 ZNF608Q9ULD9 1512 aaPredicted RBP21.5■■□□□ 1.03
CMTM1-206ENST00000457188 ARHGEF11O15085 1522 aa21.43■■□□□ 1.02
CMTM1-206ENST00000457188 EIF4G3O43432 1585 aaKnown RBP21.43■■□□□ 1.02
CMTM1-206ENST00000457188 DNMBPQ6XZF7 1577 aa21.43■■□□□ 1.02
CMTM1-206ENST00000457188 FBLN2P98095 1184 aa21.32■■□□□ 1
CMTM1-206ENST00000457188 CYB5RLQ6IPT4 315 aa21.32■■□□□ 1
CMTM1-206ENST00000457188 AQRO60306 1485 aaKnown RBP eCLIP21.32■■□□□ 1
CMTM1-206ENST00000457188 TARBP1Q13395 1621 aaKnown RBP21.3■■□□□ 1
CMTM1-206ENST00000457188 CHD1O14646 1710 aa21.3■■□□□ 1
CMTM1-206ENST00000457188 POLA1P09884 1462 aaPredicted RBP21.27■■□□□ 1
CMTM1-206ENST00000457188 TRHP20396 242 aaPredicted RBP21.22■□□□□ 0.99
CMTM1-206ENST00000457188 SOGA1O94964 1423 aa21.21■□□□□ 0.99
CMTM1-206ENST00000457188 ARAP1Q96P48 1450 aa21.18■□□□□ 0.98
CMTM1-206ENST00000457188 RAD54L2Q9Y4B4 1467 aa21.17■□□□□ 0.98
CMTM1-206ENST00000457188 WDR97A6NE52 1622 aa21.17■□□□□ 0.98
CMTM1-206ENST00000457188 TDRD9Q8NDG6 1382 aaKnown RBP21.16■□□□□ 0.98
CMTM1-206ENST00000457188 CHMP7Q8WUX9 453 aaPredicted RBP21.13■□□□□ 0.97
CMTM1-206ENST00000457188 SNAPC4Q5SXM2 1469 aa21.12■□□□□ 0.97
CMTM1-206ENST00000457188 FGD5Q6ZNL6 1462 aa21.11■□□□□ 0.97
CMTM1-206ENST00000457188 MAGI1Q96QZ7 1491 aaPredicted RBP21.09■□□□□ 0.97
CMTM1-206ENST00000457188 SYNJ1O43426 1573 aa21.09■□□□□ 0.97
CMTM1-206ENST00000457188 GRIN2BQ13224 1484 aa21.06■□□□□ 0.96
CMTM1-206ENST00000457188 CLASP1Q7Z460 1538 aa21.03■□□□□ 0.96
CMTM1-206ENST00000457188 CUX1P39880 1505 aa21.02■□□□□ 0.96
CMTM1-206ENST00000457188 SYNJ2O15056 1496 aa21.01■□□□□ 0.95
CMTM1-206ENST00000457188 GAPVD1Q14C86 1478 aa20.94■□□□□ 0.94
CMTM1-206ENST00000457188 PBRM1Q86U86 1689 aa20.93■□□□□ 0.94
CMTM1-206ENST00000457188 ABCA10Q8WWZ4 1543 aa20.87■□□□□ 0.93
CMTM1-206ENST00000457188 ABCA5Q8WWZ7 1642 aa20.83■□□□□ 0.93
CMTM1-206ENST00000457188 AEBP2Q6ZN18 517 aaPredicted RBP20.82■□□□□ 0.92
CMTM1-206ENST00000457188 WRNQ14191 1432 aaPredicted RBP eCLIP20.79■□□□□ 0.92
CMTM1-206ENST00000457188 GRIN2AQ12879 1464 aa20.76■□□□□ 0.91
CMTM1-206ENST00000457188 SUPT5HO00267 1087 aaKnown RBP20.76■□□□□ 0.91
CMTM1-206ENST00000457188 ADAMTS12P58397 1594 aa20.72■□□□□ 0.91
CMTM1-206ENST00000457188 FHAD1B1AJZ9 1412 aa20.68■□□□□ 0.9
CMTM1-206ENST00000457188 NUP160Q12769 1436 aa20.68■□□□□ 0.9
CMTM1-206ENST00000457188 TOP2BQ02880 1626 aa20.67■□□□□ 0.9
CMTM1-206ENST00000457188 CEP170Q5SW79 1584 aa20.66■□□□□ 0.9
CMTM1-206ENST00000457188 BIVM-ERCC5R4GMW8 1640 aa20.65■□□□□ 0.9
CMTM1-206ENST00000457188 ERCC6L2Q5T890 1561 aa20.64■□□□□ 0.9
CMTM1-206ENST00000457188 ERICH3Q5RHP9 1530 aa20.63■□□□□ 0.89
CMTM1-206ENST00000457188 SHROOM2Q13796 1616 aa20.6■□□□□ 0.89
CMTM1-206ENST00000457188 PRG4Q92954 1404 aaPredicted RBP20.53■□□□□ 0.88
CMTM1-206ENST00000457188 JPH4Q96JJ6 628 aa20.51■□□□□ 0.87
CMTM1-206ENST00000457188 NPM1P06748 294 aaKnown RBP eCLIP20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms