RNA–Protein interactions for RNA: ENST00000457098.5

GTF3C2-207, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 3

Gene GTF3C2, Length 762 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-207ENST00000457098 NISCHQ9Y2I1 1504 aa23.94■■□□□ 1.42
GTF3C2-207ENST00000457098 AEBP2Q6ZN18 517 aaPredicted RBP22.26■■□□□ 1.15
GTF3C2-207ENST00000457098 CCDC180Q9P1Z9 1646 aa21.55■■□□□ 1.04
GTF3C2-207ENST00000457098 ABCC9O60706 1549 aa21.52■■□□□ 1.04
GTF3C2-207ENST00000457098 CHIC1Q5VXU3 224 aa21.45■■□□□ 1.02
GTF3C2-207ENST00000457098 RB1CC1Q8TDY2 1594 aa20.53■□□□□ 0.88
GTF3C2-207ENST00000457098 NACADO15069 1562 aa20.38■□□□□ 0.85
GTF3C2-207ENST00000457098 DCAF8L2P0C7V8 631 aa20.18■□□□□ 0.82
GTF3C2-207ENST00000457098 DNAJC5BQ9UF47 199 aa20.18■□□□□ 0.82
GTF3C2-207ENST00000457098 MYO15BQ96JP2 1530 aa20.12■□□□□ 0.81
GTF3C2-207ENST00000457098 PABPN1Q86U42 306 aaKnown RBP eCLIP20■□□□□ 0.79
GTF3C2-207ENST00000457098 UNC13AQ9UPW8 1703 aa19.98■□□□□ 0.79
GTF3C2-207ENST00000457098 BICRAQ9NZM4 1560 aa19.87■□□□□ 0.77
GTF3C2-207ENST00000457098 ZCCHC6Q5VYS8 1495 aaKnown RBP19.84■□□□□ 0.77
GTF3C2-207ENST00000457098 DCAF1Q9Y4B6 1507 aa19.82■□□□□ 0.76
GTF3C2-207ENST00000457098 SHROOM4Q9ULL8 1493 aa19.73■□□□□ 0.75
GTF3C2-207ENST00000457098 SCRIBQ14160 1630 aa19.56■□□□□ 0.72
GTF3C2-207ENST00000457098 CC2D2AQ9P2K1 1620 aa19.46■□□□□ 0.71
GTF3C2-207ENST00000457098 CECR2Q9BXF3 1484 aa19.43■□□□□ 0.7
GTF3C2-207ENST00000457098 EIF4G1Q04637 1599 aaKnown RBP19.42■□□□□ 0.7
GTF3C2-207ENST00000457098 SENP3Q9H4L4 574 aaPredicted RBP19■□□□□ 0.63
GTF3C2-207ENST00000457098 NCAPD3P42695 1498 aa18.81■□□□□ 0.6
GTF3C2-207ENST00000457098 PHF23Q9BUL5 403 aaPredicted RBP18.8■□□□□ 0.6
GTF3C2-207ENST00000457098 ATAD2BQ9ULI0 1458 aa18.71■□□□□ 0.59
GTF3C2-207ENST00000457098 SMARCA2P51531 1590 aa18.7■□□□□ 0.58
GTF3C2-207ENST00000457098 SMARCA4P51532 1647 aa18.68■□□□□ 0.58
GTF3C2-207ENST00000457098 HMGXB3Q12766 1538 aa18.68■□□□□ 0.58
GTF3C2-207ENST00000457098 CUX2O14529 1486 aa18.65■□□□□ 0.58
GTF3C2-207ENST00000457098 DNAJC5Q9H3Z4 198 aa18.64■□□□□ 0.57
GTF3C2-207ENST00000457098 ERCC6Q03468 1493 aa18.64■□□□□ 0.57
GTF3C2-207ENST00000457098 BAZ1AQ9NRL2 1556 aaPredicted RBP18.62■□□□□ 0.57
GTF3C2-207ENST00000457098 BAZ1BQ9UIG0 1483 aaKnown RBP18.55■□□□□ 0.56
GTF3C2-207ENST00000457098 PEG3Q9GZU2 1588 aa18.54■□□□□ 0.56
GTF3C2-207ENST00000457098 NESP48681 1621 aa18.45■□□□□ 0.54
GTF3C2-207ENST00000457098 MROH2BQ7Z745 1585 aa18.41■□□□□ 0.54
GTF3C2-207ENST00000457098 LAMC3Q9Y6N6 1575 aa18.39■□□□□ 0.53
GTF3C2-207ENST00000457098 THOC2Q8NI27 1593 aaKnown RBP18.32■□□□□ 0.52
GTF3C2-207ENST00000457098 PDS5BQ9NTI5 1447 aa18.31■□□□□ 0.52
GTF3C2-207ENST00000457098 KIF21AQ7Z4S6 1674 aa18.22■□□□□ 0.51
GTF3C2-207ENST00000457098 CADPSQ9ULU8 1353 aa18.22■□□□□ 0.51
GTF3C2-207ENST00000457098 WIZO95785 1651 aa18.18■□□□□ 0.5
GTF3C2-207ENST00000457098 MRC2Q9UBG0 1479 aa18.13■□□□□ 0.49
GTF3C2-207ENST00000457098 WDR62O43379 1518 aa18.08■□□□□ 0.49
GTF3C2-207ENST00000457098 CEP164Q9UPV0 1460 aa18.05■□□□□ 0.48
GTF3C2-207ENST00000457098 RSF1Q96T23 1441 aaPredicted RBP18.03■□□□□ 0.48
GTF3C2-207ENST00000457098 TOP2AP11388 1531 aaKnown RBP18.01■□□□□ 0.47
GTF3C2-207ENST00000457098 CFTRP13569 1480 aa18.01■□□□□ 0.47
GTF3C2-207ENST00000457098 FANCD2Q9BXW9 1451 aa18.01■□□□□ 0.47
GTF3C2-207ENST00000457098 URB2Q14146 1524 aaKnown RBP17.84■□□□□ 0.45
GTF3C2-207ENST00000457098 PRDM2Q13029 1718 aa17.81■□□□□ 0.44
GTF3C2-207ENST00000457098 TRIM41Q8WV44 630 aa17.77■□□□□ 0.44
GTF3C2-207ENST00000457098 CCDC88BA6NC98 1476 aa17.76■□□□□ 0.43
GTF3C2-207ENST00000457098 OSCARQ8IYS5 282 aa17.76■□□□□ 0.43
GTF3C2-207ENST00000457098 IFT140Q96RY7 1462 aa17.7■□□□□ 0.42
GTF3C2-207ENST00000457098 ABCC8Q09428 1581 aa17.68■□□□□ 0.42
GTF3C2-207ENST00000457098 TOPBP1Q92547 1522 aa17.66■□□□□ 0.42
GTF3C2-207ENST00000457098 FOXD1Q16676 465 aa17.64■□□□□ 0.41
GTF3C2-207ENST00000457098 ZNF608Q9ULD9 1512 aaPredicted RBP17.61■□□□□ 0.41
GTF3C2-207ENST00000457098 DNMBPQ6XZF7 1577 aa17.6■□□□□ 0.41
GTF3C2-207ENST00000457098 EIF4G3O43432 1585 aaKnown RBP17.54■□□□□ 0.4
GTF3C2-207ENST00000457098 RIMBP3CA6NJZ7 1639 aa17.5■□□□□ 0.39
GTF3C2-207ENST00000457098 RIMBP3BA6NNM3 1639 aa17.5■□□□□ 0.39
GTF3C2-207ENST00000457098 TARBP1Q13395 1621 aaKnown RBP17.5■□□□□ 0.39
GTF3C2-207ENST00000457098 RIMBP3Q9UFD9 1639 aa17.5■□□□□ 0.39
GTF3C2-207ENST00000457098 POLA1P09884 1462 aaPredicted RBP17.47■□□□□ 0.39
GTF3C2-207ENST00000457098 ARHGEF11O15085 1522 aa17.46■□□□□ 0.39
GTF3C2-207ENST00000457098 AQRO60306 1485 aaKnown RBP eCLIP17.45■□□□□ 0.381e-6■■□□□ 13.7
GTF3C2-207ENST00000457098 WDR97A6NE52 1622 aa17.39■□□□□ 0.38
GTF3C2-207ENST00000457098 SOGA1O94964 1423 aa17.39■□□□□ 0.38
GTF3C2-207ENST00000457098 CHD1O14646 1710 aa17.39■□□□□ 0.37
GTF3C2-207ENST00000457098 RAD54L2Q9Y4B4 1467 aa17.37■□□□□ 0.37
GTF3C2-207ENST00000457098 FBLN2P98095 1184 aa17.36■□□□□ 0.37
GTF3C2-207ENST00000457098 FGD5Q6ZNL6 1462 aa17.35■□□□□ 0.37
GTF3C2-207ENST00000457098 TDRD9Q8NDG6 1382 aaKnown RBP17.34■□□□□ 0.37
GTF3C2-207ENST00000457098 CYB5RLQ6IPT4 315 aa17.31■□□□□ 0.36
GTF3C2-207ENST00000457098 CUX1P39880 1505 aa17.31■□□□□ 0.36
GTF3C2-207ENST00000457098 SNAPC4Q5SXM2 1469 aa17.3■□□□□ 0.36
GTF3C2-207ENST00000457098 PLPPR3Q6T4P5 718 aa17.29■□□□□ 0.36
GTF3C2-207ENST00000457098 MAGI1Q96QZ7 1491 aaPredicted RBP17.29■□□□□ 0.36
GTF3C2-207ENST00000457098 GRIN2BQ13224 1484 aa17.27■□□□□ 0.36
GTF3C2-207ENST00000457098 ARAP1Q96P48 1450 aa17.27■□□□□ 0.36
GTF3C2-207ENST00000457098 CHMP7Q8WUX9 453 aaPredicted RBP17.25■□□□□ 0.35
GTF3C2-207ENST00000457098 SYNJ1O43426 1573 aa17.24■□□□□ 0.35
GTF3C2-207ENST00000457098 CLASP1Q7Z460 1538 aa17.23■□□□□ 0.35
GTF3C2-207ENST00000457098 SYNJ2O15056 1496 aa17.23■□□□□ 0.35
GTF3C2-207ENST00000457098 GAPVD1Q14C86 1478 aa17.18■□□□□ 0.34
GTF3C2-207ENST00000457098 ABCA10Q8WWZ4 1543 aa17.17■□□□□ 0.34
GTF3C2-207ENST00000457098 PBRM1Q86U86 1689 aa17.16■□□□□ 0.34
GTF3C2-207ENST00000457098 SUPT5HO00267 1087 aaKnown RBP17.16■□□□□ 0.34
GTF3C2-207ENST00000457098 ABCA5Q8WWZ7 1642 aa17.14■□□□□ 0.33
GTF3C2-207ENST00000457098 TRHP20396 242 aaPredicted RBP17.14■□□□□ 0.33
GTF3C2-207ENST00000457098 WRNQ14191 1432 aaPredicted RBP eCLIP17.12■□□□□ 0.33
GTF3C2-207ENST00000457098 TOP2BQ02880 1626 aa17.05■□□□□ 0.32
GTF3C2-207ENST00000457098 BIVM-ERCC5R4GMW8 1640 aa17.04■□□□□ 0.32
GTF3C2-207ENST00000457098 GRIN2AQ12879 1464 aa17.04■□□□□ 0.32
GTF3C2-207ENST00000457098 ADAMTS12P58397 1594 aa17.02■□□□□ 0.31
GTF3C2-207ENST00000457098 FHAD1B1AJZ9 1412 aa16.98■□□□□ 0.31
GTF3C2-207ENST00000457098 NUP160Q12769 1436 aa16.98■□□□□ 0.31
GTF3C2-207ENST00000457098 ERICH3Q5RHP9 1530 aa16.97■□□□□ 0.31
GTF3C2-207ENST00000457098 CEP170Q5SW79 1584 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms