RNA–Protein interactions for RNA: ENST00000456677.1

WDR53-205, Transcript of WD repeat domain 53, humanhuman

TSL 3

Gene WDR53, Length 616 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WDR53-205ENST00000456677 NISCHQ9Y2I1 1504 aa26.32■■□□□ 1.8
WDR53-205ENST00000456677 CCDC180Q9P1Z9 1646 aa23.49■■□□□ 1.35
WDR53-205ENST00000456677 ABCC9O60706 1549 aa23.23■■□□□ 1.31
WDR53-205ENST00000456677 RB1CC1Q8TDY2 1594 aa22.2■■□□□ 1.14
WDR53-205ENST00000456677 DCAF8L2P0C7V8 631 aa22.17■■□□□ 1.14
WDR53-205ENST00000456677 AEBP2Q6ZN18 517 aaPredicted RBP22.13■■□□□ 1.13
WDR53-205ENST00000456677 NACADO15069 1562 aa22.09■■□□□ 1.13
WDR53-205ENST00000456677 ZCCHC6Q5VYS8 1495 aaKnown RBP21.89■■□□□ 1.09
WDR53-205ENST00000456677 MYO15BQ96JP2 1530 aa21.82■■□□□ 1.08
WDR53-205ENST00000456677 UNC13AQ9UPW8 1703 aa21.8■■□□□ 1.08
WDR53-205ENST00000456677 DCAF1Q9Y4B6 1507 aa21.7■■□□□ 1.06
WDR53-205ENST00000456677 PABPN1Q86U42 306 aaKnown RBP eCLIP21.68■■□□□ 1.06
WDR53-205ENST00000456677 BICRAQ9NZM4 1560 aa21.55■■□□□ 1.04
WDR53-205ENST00000456677 SCRIBQ14160 1630 aa21.51■■□□□ 1.03
WDR53-205ENST00000456677 DNAJC5BQ9UF47 199 aa21.44■■□□□ 1.02
WDR53-205ENST00000456677 CHIC1Q5VXU3 224 aa21.42■■□□□ 1.02
WDR53-205ENST00000456677 SHROOM4Q9ULL8 1493 aa21.19■□□□□ 0.98
WDR53-205ENST00000456677 EIF4G1Q04637 1599 aaKnown RBP21■□□□□ 0.95
WDR53-205ENST00000456677 CC2D2AQ9P2K1 1620 aa20.98■□□□□ 0.95
WDR53-205ENST00000456677 CECR2Q9BXF3 1484 aa20.85■□□□□ 0.93
WDR53-205ENST00000456677 SMARCA4P51532 1647 aa20.5■□□□□ 0.87
WDR53-205ENST00000456677 BAZ1AQ9NRL2 1556 aaPredicted RBP20.41■□□□□ 0.86
WDR53-205ENST00000456677 ATAD2BQ9ULI0 1458 aa20.39■□□□□ 0.85
WDR53-205ENST00000456677 SMARCA2P51531 1590 aa20.36■□□□□ 0.85
WDR53-205ENST00000456677 NCAPD3P42695 1498 aa20.36■□□□□ 0.85
WDR53-205ENST00000456677 MROH2BQ7Z745 1585 aa20.33■□□□□ 0.84
WDR53-205ENST00000456677 HMGXB3Q12766 1538 aa20.28■□□□□ 0.84
WDR53-205ENST00000456677 BAZ1BQ9UIG0 1483 aaKnown RBP20.25■□□□□ 0.83
WDR53-205ENST00000456677 PEG3Q9GZU2 1588 aa20.22■□□□□ 0.83
WDR53-205ENST00000456677 WIZO95785 1651 aa20.13■□□□□ 0.81
WDR53-205ENST00000456677 NESP48681 1621 aa20.05■□□□□ 0.8
WDR53-205ENST00000456677 ERCC6Q03468 1493 aa20.03■□□□□ 0.8
WDR53-205ENST00000456677 RSF1Q96T23 1441 aaPredicted RBP19.99■□□□□ 0.79
WDR53-205ENST00000456677 LAMC3Q9Y6N6 1575 aa19.9■□□□□ 0.78
WDR53-205ENST00000456677 TOP2AP11388 1531 aaKnown RBP19.86■□□□□ 0.77
WDR53-205ENST00000456677 KIF21AQ7Z4S6 1674 aa19.84■□□□□ 0.77
WDR53-205ENST00000456677 CUX2O14529 1486 aa19.79■□□□□ 0.76
WDR53-205ENST00000456677 CADPSQ9ULU8 1353 aa19.78■□□□□ 0.76
WDR53-205ENST00000456677 THOC2Q8NI27 1593 aaKnown RBP19.76■□□□□ 0.75
WDR53-205ENST00000456677 PDS5BQ9NTI5 1447 aa19.76■□□□□ 0.75
WDR53-205ENST00000456677 CFTRP13569 1480 aa19.63■□□□□ 0.73
WDR53-205ENST00000456677 CCDC88BA6NC98 1476 aa19.62■□□□□ 0.73
WDR53-205ENST00000456677 FANCD2Q9BXW9 1451 aa19.6■□□□□ 0.73
WDR53-205ENST00000456677 MRC2Q9UBG0 1479 aa19.6■□□□□ 0.73
WDR53-205ENST00000456677 CEP164Q9UPV0 1460 aa19.6■□□□□ 0.73
WDR53-205ENST00000456677 PRDM2Q13029 1718 aa19.56■□□□□ 0.72
WDR53-205ENST00000456677 WDR62O43379 1518 aa19.53■□□□□ 0.72
WDR53-205ENST00000456677 DNAJC5Q9H3Z4 198 aa19.46■□□□□ 0.71
WDR53-205ENST00000456677 SUPT5HO00267 1087 aaKnown RBP19.44■□□□□ 0.7
WDR53-205ENST00000456677 URB2Q14146 1524 aaKnown RBP19.43■□□□□ 0.7
WDR53-205ENST00000456677 TOPBP1Q92547 1522 aa19.27■□□□□ 0.68
WDR53-205ENST00000456677 DNMBPQ6XZF7 1577 aa19.24■□□□□ 0.67
WDR53-205ENST00000456677 ABCC8Q09428 1581 aa19.19■□□□□ 0.66
WDR53-205ENST00000456677 IFT140Q96RY7 1462 aa19.17■□□□□ 0.66
WDR53-205ENST00000456677 ZNF608Q9ULD9 1512 aaPredicted RBP19.15■□□□□ 0.66
WDR53-205ENST00000456677 POLA1P09884 1462 aaPredicted RBP19.09■□□□□ 0.65
WDR53-205ENST00000456677 TARBP1Q13395 1621 aaKnown RBP19.08■□□□□ 0.65
WDR53-205ENST00000456677 EIF4G3O43432 1585 aaKnown RBP19.08■□□□□ 0.65
WDR53-205ENST00000456677 CUX1P39880 1505 aa19.08■□□□□ 0.64
WDR53-205ENST00000456677 RAD54L2Q9Y4B4 1467 aa19.05■□□□□ 0.64
WDR53-205ENST00000456677 FGD5Q6ZNL6 1462 aa19.04■□□□□ 0.64
WDR53-205ENST00000456677 AQRO60306 1485 aaKnown RBP eCLIP19.02■□□□□ 0.63
WDR53-205ENST00000456677 SOGA1O94964 1423 aa19■□□□□ 0.63
WDR53-205ENST00000456677 OSCARQ8IYS5 282 aa18.95■□□□□ 0.62
WDR53-205ENST00000456677 TDRD9Q8NDG6 1382 aaKnown RBP18.94■□□□□ 0.62
WDR53-205ENST00000456677 CHD1O14646 1710 aa18.92■□□□□ 0.62
WDR53-205ENST00000456677 WDR97A6NE52 1622 aa18.91■□□□□ 0.62
WDR53-205ENST00000456677 SENP3Q9H4L4 574 aaPredicted RBP18.89■□□□□ 0.61
WDR53-205ENST00000456677 SYNJ1O43426 1573 aa18.89■□□□□ 0.61
WDR53-205ENST00000456677 BIVM-ERCC5R4GMW8 1640 aa18.86■□□□□ 0.61
WDR53-205ENST00000456677 WRNQ14191 1432 aaPredicted RBP eCLIP18.86■□□□□ 0.61
WDR53-205ENST00000456677 FBLN2P98095 1184 aa18.86■□□□□ 0.61
WDR53-205ENST00000456677 TOP2BQ02880 1626 aa18.85■□□□□ 0.61
WDR53-205ENST00000456677 SNAPC4Q5SXM2 1469 aa18.84■□□□□ 0.61
WDR53-205ENST00000456677 PBRM1Q86U86 1689 aa18.83■□□□□ 0.61
WDR53-205ENST00000456677 TRIM41Q8WV44 630 aa18.81■□□□□ 0.6
WDR53-205ENST00000456677 ABCA10Q8WWZ4 1543 aa18.79■□□□□ 0.6
WDR53-205ENST00000456677 GRIN2BQ13224 1484 aa18.79■□□□□ 0.6
WDR53-205ENST00000456677 ABCA5Q8WWZ7 1642 aa18.78■□□□□ 0.6
WDR53-205ENST00000456677 GAPVD1Q14C86 1478 aa18.78■□□□□ 0.6
WDR53-205ENST00000456677 PHF23Q9BUL5 403 aaPredicted RBP18.78■□□□□ 0.6
WDR53-205ENST00000456677 MAGI1Q96QZ7 1491 aaPredicted RBP18.75■□□□□ 0.59
WDR53-205ENST00000456677 RIMBP3CA6NJZ7 1639 aa18.74■□□□□ 0.59
WDR53-205ENST00000456677 RIMBP3BA6NNM3 1639 aa18.74■□□□□ 0.59
WDR53-205ENST00000456677 RIMBP3Q9UFD9 1639 aa18.74■□□□□ 0.59
WDR53-205ENST00000456677 CHMP7Q8WUX9 453 aaPredicted RBP18.72■□□□□ 0.59
WDR53-205ENST00000456677 ARHGEF11O15085 1522 aa18.69■□□□□ 0.58
WDR53-205ENST00000456677 SYNJ2O15056 1496 aa18.69■□□□□ 0.58
WDR53-205ENST00000456677 ADAMTS12P58397 1594 aa18.63■□□□□ 0.57
WDR53-205ENST00000456677 CLASP1Q7Z460 1538 aa18.62■□□□□ 0.57
WDR53-205ENST00000456677 ERICH3Q5RHP9 1530 aa18.57■□□□□ 0.56
WDR53-205ENST00000456677 GRIN2AQ12879 1464 aa18.57■□□□□ 0.56
WDR53-205ENST00000456677 CYB5RLQ6IPT4 315 aa18.54■□□□□ 0.56
WDR53-205ENST00000456677 FHAD1B1AJZ9 1412 aa18.54■□□□□ 0.56
WDR53-205ENST00000456677 ARAP1Q96P48 1450 aa18.53■□□□□ 0.56
WDR53-205ENST00000456677 CEP170Q5SW79 1584 aa18.51■□□□□ 0.55
WDR53-205ENST00000456677 KIF27Q86VH2 1401 aa18.47■□□□□ 0.55
WDR53-205ENST00000456677 NUP160Q12769 1436 aa18.46■□□□□ 0.55
WDR53-205ENST00000456677 ERCC6L2Q5T890 1561 aa18.42■□□□□ 0.54
WDR53-205ENST00000456677 CUL7Q14999 1698 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms