RNA–Protein interactions for RNA: ENST00000455878.2

PSMC4-202, Transcript of proteasome 26S subunit, ATPase 4, humanhuman

TSL 1 (best) BASIC

Gene PSMC4, Length 1,333 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC4-202ENST00000455878 NISCHQ9Y2I1 1504 aa33.18■■■□□ 2.9
PSMC4-202ENST00000455878 ABCC9O60706 1549 aa30■■■□□ 2.39
PSMC4-202ENST00000455878 CCDC180Q9P1Z9 1646 aa29.72■■■□□ 2.35
PSMC4-202ENST00000455878 RB1CC1Q8TDY2 1594 aa28.46■■■□□ 2.15
PSMC4-202ENST00000455878 DCAF8L2P0C7V8 631 aa28.38■■■□□ 2.13
PSMC4-202ENST00000455878 DNAJC5BQ9UF47 199 aa28.3■■■□□ 2.12
PSMC4-202ENST00000455878 NACADO15069 1562 aa28.24■■■□□ 2.11
PSMC4-202ENST00000455878 PABPN1Q86U42 306 aaKnown RBP eCLIP28.03■■■□□ 2.08
PSMC4-202ENST00000455878 MYO15BQ96JP2 1530 aa27.77■■■□□ 2.04
PSMC4-202ENST00000455878 UNC13AQ9UPW8 1703 aa27.67■■■□□ 2.02
PSMC4-202ENST00000455878 BICRAQ9NZM4 1560 aa27.54■■■□□ 2
PSMC4-202ENST00000455878 ZCCHC6Q5VYS8 1495 aaKnown RBP27.4■■□□□ 1.98
PSMC4-202ENST00000455878 DCAF1Q9Y4B6 1507 aa27.36■■□□□ 1.97
PSMC4-202ENST00000455878 SHROOM4Q9ULL8 1493 aa27.21■■□□□ 1.95
PSMC4-202ENST00000455878 SCRIBQ14160 1630 aa27.14■■□□□ 1.93
PSMC4-202ENST00000455878 CECR2Q9BXF3 1484 aa27.05■■□□□ 1.92
PSMC4-202ENST00000455878 CC2D2AQ9P2K1 1620 aa27.03■■□□□ 1.92
PSMC4-202ENST00000455878 EIF4G1Q04637 1599 aaKnown RBP26.94■■□□□ 1.9
PSMC4-202ENST00000455878 DNAJC5Q9H3Z4 198 aa26.14■■□□□ 1.78
PSMC4-202ENST00000455878 NCAPD3P42695 1498 aa26.1■■□□□ 1.77
PSMC4-202ENST00000455878 ATAD2BQ9ULI0 1458 aa25.99■■□□□ 1.75
PSMC4-202ENST00000455878 ERCC6Q03468 1493 aa25.97■■□□□ 1.75
PSMC4-202ENST00000455878 SMARCA2P51531 1590 aa25.9■■□□□ 1.74
PSMC4-202ENST00000455878 CUX2O14529 1486 aa25.89■■□□□ 1.74
PSMC4-202ENST00000455878 SMARCA4P51532 1647 aa25.86■■□□□ 1.73
PSMC4-202ENST00000455878 HMGXB3Q12766 1538 aa25.81■■□□□ 1.72
PSMC4-202ENST00000455878 BAZ1AQ9NRL2 1556 aaPredicted RBP25.76■■□□□ 1.71
PSMC4-202ENST00000455878 BAZ1BQ9UIG0 1483 aaKnown RBP25.74■■□□□ 1.71
PSMC4-202ENST00000455878 NESP48681 1621 aa25.69■■□□□ 1.7
PSMC4-202ENST00000455878 PEG3Q9GZU2 1588 aa25.58■■□□□ 1.69
PSMC4-202ENST00000455878 MROH2BQ7Z745 1585 aa25.54■■□□□ 1.68
PSMC4-202ENST00000455878 LAMC3Q9Y6N6 1575 aa25.49■■□□□ 1.67
PSMC4-202ENST00000455878 PDS5BQ9NTI5 1447 aa25.47■■□□□ 1.67
PSMC4-202ENST00000455878 CADPSQ9ULU8 1353 aa25.35■■□□□ 1.65
PSMC4-202ENST00000455878 THOC2Q8NI27 1593 aaKnown RBP25.35■■□□□ 1.65
PSMC4-202ENST00000455878 KIF21AQ7Z4S6 1674 aa25.27■■□□□ 1.64
PSMC4-202ENST00000455878 WIZO95785 1651 aa25.21■■□□□ 1.63
PSMC4-202ENST00000455878 MRC2Q9UBG0 1479 aa25.16■■□□□ 1.62
PSMC4-202ENST00000455878 CEP164Q9UPV0 1460 aa25.05■■□□□ 1.6
PSMC4-202ENST00000455878 WDR62O43379 1518 aa25.04■■□□□ 1.6
PSMC4-202ENST00000455878 FANCD2Q9BXW9 1451 aa25.02■■□□□ 1.6
PSMC4-202ENST00000455878 RSF1Q96T23 1441 aaPredicted RBP25.02■■□□□ 1.6
PSMC4-202ENST00000455878 TRIM41Q8WV44 630 aa25.01■■□□□ 1.59
PSMC4-202ENST00000455878 CFTRP13569 1480 aa24.97■■□□□ 1.59
PSMC4-202ENST00000455878 OSCARQ8IYS5 282 aa24.88■■□□□ 1.57
PSMC4-202ENST00000455878 TOP2AP11388 1531 aaKnown RBP24.88■■□□□ 1.57
PSMC4-202ENST00000455878 URB2Q14146 1524 aaKnown RBP24.76■■□□□ 1.55
PSMC4-202ENST00000455878 CCDC88BA6NC98 1476 aa24.69■■□□□ 1.54
PSMC4-202ENST00000455878 IFT140Q96RY7 1462 aa24.57■■□□□ 1.52
PSMC4-202ENST00000455878 PRDM2Q13029 1718 aa24.55■■□□□ 1.52
PSMC4-202ENST00000455878 ABCC8Q09428 1581 aa24.52■■□□□ 1.52
PSMC4-202ENST00000455878 ZNF608Q9ULD9 1512 aaPredicted RBP24.5■■□□□ 1.51
PSMC4-202ENST00000455878 TOPBP1Q92547 1522 aa24.49■■□□□ 1.51
PSMC4-202ENST00000455878 DNMBPQ6XZF7 1577 aa24.37■■□□□ 1.49
PSMC4-202ENST00000455878 FBLN2P98095 1184 aa24.36■■□□□ 1.49
PSMC4-202ENST00000455878 AQRO60306 1485 aaKnown RBP eCLIP24.34■■□□□ 1.493e-7■■■■□ 23.9
PSMC4-202ENST00000455878 RIMBP3CA6NJZ7 1639 aa24.33■■□□□ 1.48
PSMC4-202ENST00000455878 RIMBP3BA6NNM3 1639 aa24.33■■□□□ 1.48
PSMC4-202ENST00000455878 RIMBP3Q9UFD9 1639 aa24.33■■□□□ 1.48
PSMC4-202ENST00000455878 CYB5RLQ6IPT4 315 aa24.31■■□□□ 1.48
PSMC4-202ENST00000455878 EIF4G3O43432 1585 aaKnown RBP24.28■■□□□ 1.48
PSMC4-202ENST00000455878 ARHGEF11O15085 1522 aa24.26■■□□□ 1.47
PSMC4-202ENST00000455878 POLA1P09884 1462 aaPredicted RBP24.23■■□□□ 1.47
PSMC4-202ENST00000455878 TARBP1Q13395 1621 aaKnown RBP24.23■■□□□ 1.47
PSMC4-202ENST00000455878 SOGA1O94964 1423 aa24.23■■□□□ 1.47
PSMC4-202ENST00000455878 TDRD9Q8NDG6 1382 aaKnown RBP24.2■■□□□ 1.46
PSMC4-202ENST00000455878 RAD54L2Q9Y4B4 1467 aa24.19■■□□□ 1.46
PSMC4-202ENST00000455878 CHMP7Q8WUX9 453 aaPredicted RBP24.14■■□□□ 1.46
PSMC4-202ENST00000455878 TRHP20396 242 aaPredicted RBP24.12■■□□□ 1.45
PSMC4-202ENST00000455878 CHD1O14646 1710 aa24.12■■□□□ 1.45
PSMC4-202ENST00000455878 FGD5Q6ZNL6 1462 aa24.07■■□□□ 1.44
PSMC4-202ENST00000455878 SNAPC4Q5SXM2 1469 aa24.02■■□□□ 1.44
PSMC4-202ENST00000455878 SUPT5HO00267 1087 aaKnown RBP24.01■■□□□ 1.43
PSMC4-202ENST00000455878 ARAP1Q96P48 1450 aa24■■□□□ 1.43
PSMC4-202ENST00000455878 CUX1P39880 1505 aa23.99■■□□□ 1.43
PSMC4-202ENST00000455878 WDR97A6NE52 1622 aa23.99■■□□□ 1.43
PSMC4-202ENST00000455878 GRIN2BQ13224 1484 aa23.98■■□□□ 1.43
PSMC4-202ENST00000455878 MAGI1Q96QZ7 1491 aaPredicted RBP23.96■■□□□ 1.43
PSMC4-202ENST00000455878 SYNJ1O43426 1573 aa23.91■■□□□ 1.42
PSMC4-202ENST00000455878 SYNJ2O15056 1496 aa23.9■■□□□ 1.42
PSMC4-202ENST00000455878 GAPVD1Q14C86 1478 aa23.89■■□□□ 1.41
PSMC4-202ENST00000455878 CLASP1Q7Z460 1538 aa23.85■■□□□ 1.41
PSMC4-202ENST00000455878 ABCA10Q8WWZ4 1543 aa23.79■■□□□ 1.4
PSMC4-202ENST00000455878 WRNQ14191 1432 aaPredicted RBP eCLIP23.76■■□□□ 1.39
PSMC4-202ENST00000455878 PBRM1Q86U86 1689 aa23.74■■□□□ 1.39
PSMC4-202ENST00000455878 ABCA5Q8WWZ7 1642 aa23.68■■□□□ 1.38
PSMC4-202ENST00000455878 GRIN2AQ12879 1464 aa23.63■■□□□ 1.37
PSMC4-202ENST00000455878 FHAD1B1AJZ9 1412 aa23.58■■□□□ 1.37
PSMC4-202ENST00000455878 TOP2BQ02880 1626 aa23.58■■□□□ 1.37
PSMC4-202ENST00000455878 AEBP2Q6ZN18 517 aaPredicted RBP23.56■■□□□ 1.36
PSMC4-202ENST00000455878 NUP160Q12769 1436 aa23.54■■□□□ 1.36
PSMC4-202ENST00000455878 BIVM-ERCC5R4GMW8 1640 aa23.53■■□□□ 1.36
PSMC4-202ENST00000455878 ADAMTS12P58397 1594 aa23.52■■□□□ 1.36
PSMC4-202ENST00000455878 CEP170Q5SW79 1584 aa23.49■■□□□ 1.35
PSMC4-202ENST00000455878 JPH4Q96JJ6 628 aa23.49■■□□□ 1.35
PSMC4-202ENST00000455878 ERCC6L2Q5T890 1561 aa23.49■■□□□ 1.35
PSMC4-202ENST00000455878 ERICH3Q5RHP9 1530 aa23.48■■□□□ 1.35
PSMC4-202ENST00000455878 PRG4Q92954 1404 aaPredicted RBP23.42■■□□□ 1.34
PSMC4-202ENST00000455878 NPM1P06748 294 aaKnown RBP eCLIP23.39■■□□□ 1.34
PSMC4-202ENST00000455878 SHROOM2Q13796 1616 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms