RNA–Protein interactions for RNA: ENST00000455627.1

ATP13A1-203, Transcript of ATPase 13A1, humanhuman

TSL 4

Gene ATP13A1, Length 554 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1-203ENST00000455627 NISCHQ9Y2I1 1504 aa26.05■■□□□ 1.76
ATP13A1-203ENST00000455627 ABCC9O60706 1549 aa23.78■■□□□ 1.4
ATP13A1-203ENST00000455627 CCDC180Q9P1Z9 1646 aa23.2■■□□□ 1.3
ATP13A1-203ENST00000455627 DNAJC5BQ9UF47 199 aa22.85■■□□□ 1.25
ATP13A1-203ENST00000455627 RB1CC1Q8TDY2 1594 aa22.29■■□□□ 1.16
ATP13A1-203ENST00000455627 PABPN1Q86U42 306 aaKnown RBP eCLIP22.07■■□□□ 1.12
ATP13A1-203ENST00000455627 NACADO15069 1562 aa22.03■■□□□ 1.12
ATP13A1-203ENST00000455627 UNC13AQ9UPW8 1703 aa21.96■■□□□ 1.11
ATP13A1-203ENST00000455627 BICRAQ9NZM4 1560 aa21.85■■□□□ 1.09
ATP13A1-203ENST00000455627 DCAF8L2P0C7V8 631 aa21.81■■□□□ 1.08
ATP13A1-203ENST00000455627 ZCCHC6Q5VYS8 1495 aaKnown RBP21.74■■□□□ 1.07
ATP13A1-203ENST00000455627 DCAF1Q9Y4B6 1507 aa21.56■■□□□ 1.04
ATP13A1-203ENST00000455627 MYO15BQ96JP2 1530 aa21.55■■□□□ 1.04
ATP13A1-203ENST00000455627 CC2D2AQ9P2K1 1620 aa21.44■■□□□ 1.02
ATP13A1-203ENST00000455627 CECR2Q9BXF3 1484 aa21.41■■□□□ 1.02
ATP13A1-203ENST00000455627 EIF4G1Q04637 1599 aaKnown RBP21.26■□□□□ 0.99
ATP13A1-203ENST00000455627 SHROOM4Q9ULL8 1493 aa21.26■□□□□ 0.99
ATP13A1-203ENST00000455627 SCRIBQ14160 1630 aa21.22■□□□□ 0.99
ATP13A1-203ENST00000455627 DNAJC5Q9H3Z4 198 aa21.14■□□□□ 0.97
ATP13A1-203ENST00000455627 CUX2O14529 1486 aa20.56■□□□□ 0.88
ATP13A1-203ENST00000455627 ERCC6Q03468 1493 aa20.43■□□□□ 0.86
ATP13A1-203ENST00000455627 NCAPD3P42695 1498 aa20.38■□□□□ 0.85
ATP13A1-203ENST00000455627 NESP48681 1621 aa20.35■□□□□ 0.85
ATP13A1-203ENST00000455627 ATAD2BQ9ULI0 1458 aa20.3■□□□□ 0.84
ATP13A1-203ENST00000455627 THOC2Q8NI27 1593 aaKnown RBP20.21■□□□□ 0.83
ATP13A1-203ENST00000455627 HMGXB3Q12766 1538 aa20.18■□□□□ 0.82
ATP13A1-203ENST00000455627 SMARCA4P51532 1647 aa20.17■□□□□ 0.82
ATP13A1-203ENST00000455627 BAZ1AQ9NRL2 1556 aaPredicted RBP20.16■□□□□ 0.82
ATP13A1-203ENST00000455627 SMARCA2P51531 1590 aa20.11■□□□□ 0.81
ATP13A1-203ENST00000455627 MROH2BQ7Z745 1585 aa20.08■□□□□ 0.81
ATP13A1-203ENST00000455627 TRIM41Q8WV44 630 aa20.03■□□□□ 0.8
ATP13A1-203ENST00000455627 KIF21AQ7Z4S6 1674 aa20.03■□□□□ 0.8
ATP13A1-203ENST00000455627 BAZ1BQ9UIG0 1483 aaKnown RBP20.01■□□□□ 0.79
ATP13A1-203ENST00000455627 PEG3Q9GZU2 1588 aa19.96■□□□□ 0.79
ATP13A1-203ENST00000455627 LAMC3Q9Y6N6 1575 aa19.96■□□□□ 0.79
ATP13A1-203ENST00000455627 RSF1Q96T23 1441 aaPredicted RBP19.93■□□□□ 0.78
ATP13A1-203ENST00000455627 WIZO95785 1651 aa19.92■□□□□ 0.78
ATP13A1-203ENST00000455627 PDS5BQ9NTI5 1447 aa19.81■□□□□ 0.76
ATP13A1-203ENST00000455627 WDR62O43379 1518 aa19.76■□□□□ 0.75
ATP13A1-203ENST00000455627 MRC2Q9UBG0 1479 aa19.75■□□□□ 0.75
ATP13A1-203ENST00000455627 CADPSQ9ULU8 1353 aa19.72■□□□□ 0.75
ATP13A1-203ENST00000455627 TOP2AP11388 1531 aaKnown RBP19.67■□□□□ 0.74
ATP13A1-203ENST00000455627 SUPT5HO00267 1087 aaKnown RBP19.62■□□□□ 0.73
ATP13A1-203ENST00000455627 CEP164Q9UPV0 1460 aa19.56■□□□□ 0.72
ATP13A1-203ENST00000455627 FANCD2Q9BXW9 1451 aa19.54■□□□□ 0.72
ATP13A1-203ENST00000455627 OSCARQ8IYS5 282 aa19.5■□□□□ 0.71
ATP13A1-203ENST00000455627 URB2Q14146 1524 aaKnown RBP19.48■□□□□ 0.71
ATP13A1-203ENST00000455627 RIMBP3CA6NJZ7 1639 aa19.46■□□□□ 0.71
ATP13A1-203ENST00000455627 RIMBP3BA6NNM3 1639 aa19.46■□□□□ 0.71
ATP13A1-203ENST00000455627 RIMBP3Q9UFD9 1639 aa19.46■□□□□ 0.71
ATP13A1-203ENST00000455627 CCDC88BA6NC98 1476 aa19.45■□□□□ 0.7
ATP13A1-203ENST00000455627 CFTRP13569 1480 aa19.43■□□□□ 0.7
ATP13A1-203ENST00000455627 ZNF608Q9ULD9 1512 aaPredicted RBP19.34■□□□□ 0.69
ATP13A1-203ENST00000455627 ARHGEF11O15085 1522 aa19.33■□□□□ 0.68
ATP13A1-203ENST00000455627 PRDM2Q13029 1718 aa19.28■□□□□ 0.68
ATP13A1-203ENST00000455627 IFT140Q96RY7 1462 aa19.17■□□□□ 0.66
ATP13A1-203ENST00000455627 CYB5RLQ6IPT4 315 aa19.16■□□□□ 0.66
ATP13A1-203ENST00000455627 EIF4G3O43432 1585 aaKnown RBP19.15■□□□□ 0.66
ATP13A1-203ENST00000455627 ARAP1Q96P48 1450 aa19.15■□□□□ 0.66
ATP13A1-203ENST00000455627 TOPBP1Q92547 1522 aa19.14■□□□□ 0.65
ATP13A1-203ENST00000455627 CHD1O14646 1710 aa19.11■□□□□ 0.65
ATP13A1-203ENST00000455627 AQRO60306 1485 aaKnown RBP eCLIP19.05■□□□□ 0.643e-6■■□□□ 11.8
ATP13A1-203ENST00000455627 TARBP1Q13395 1621 aaKnown RBP19.03■□□□□ 0.64
ATP13A1-203ENST00000455627 TRHP20396 242 aaPredicted RBP19.03■□□□□ 0.64
ATP13A1-203ENST00000455627 DNMBPQ6XZF7 1577 aa18.98■□□□□ 0.63
ATP13A1-203ENST00000455627 POLA1P09884 1462 aaPredicted RBP18.92■□□□□ 0.62
ATP13A1-203ENST00000455627 FBLN2P98095 1184 aa18.91■□□□□ 0.62
ATP13A1-203ENST00000455627 RAD54L2Q9Y4B4 1467 aa18.9■□□□□ 0.62
ATP13A1-203ENST00000455627 CLASP1Q7Z460 1538 aa18.89■□□□□ 0.61
ATP13A1-203ENST00000455627 ABCC8Q09428 1581 aa18.89■□□□□ 0.61
ATP13A1-203ENST00000455627 TDRD9Q8NDG6 1382 aaKnown RBP18.84■□□□□ 0.61
ATP13A1-203ENST00000455627 SNAPC4Q5SXM2 1469 aa18.84■□□□□ 0.61
ATP13A1-203ENST00000455627 CUX1P39880 1505 aa18.83■□□□□ 0.6
ATP13A1-203ENST00000455627 WRNQ14191 1432 aaPredicted RBP eCLIP18.77■□□□□ 0.6
ATP13A1-203ENST00000455627 SOGA1O94964 1423 aa18.76■□□□□ 0.59
ATP13A1-203ENST00000455627 BIVM-ERCC5R4GMW8 1640 aa18.75■□□□□ 0.59
ATP13A1-203ENST00000455627 SYNJ1O43426 1573 aa18.75■□□□□ 0.59
ATP13A1-203ENST00000455627 TOP2BQ02880 1626 aa18.74■□□□□ 0.59
ATP13A1-203ENST00000455627 AEBP2Q6ZN18 517 aaPredicted RBP18.74■□□□□ 0.59
ATP13A1-203ENST00000455627 FGD5Q6ZNL6 1462 aa18.73■□□□□ 0.59
ATP13A1-203ENST00000455627 MAGI1Q96QZ7 1491 aaPredicted RBP18.67■□□□□ 0.58
ATP13A1-203ENST00000455627 CHMP7Q8WUX9 453 aaPredicted RBP18.66■□□□□ 0.58
ATP13A1-203ENST00000455627 ERCC6L2Q5T890 1561 aa18.66■□□□□ 0.58
ATP13A1-203ENST00000455627 WDR97A6NE52 1622 aa18.66■□□□□ 0.58
ATP13A1-203ENST00000455627 GAPVD1Q14C86 1478 aa18.65■□□□□ 0.58
ATP13A1-203ENST00000455627 SYNJ2O15056 1496 aa18.64■□□□□ 0.57
ATP13A1-203ENST00000455627 GRIN2BQ13224 1484 aa18.64■□□□□ 0.57
ATP13A1-203ENST00000455627 PBRM1Q86U86 1689 aa18.6■□□□□ 0.57
ATP13A1-203ENST00000455627 ABCA10Q8WWZ4 1543 aa18.54■□□□□ 0.56
ATP13A1-203ENST00000455627 ABCA5Q8WWZ7 1642 aa18.52■□□□□ 0.56
ATP13A1-203ENST00000455627 CHIC1Q5VXU3 224 aa18.49■□□□□ 0.55
ATP13A1-203ENST00000455627 CEP170Q5SW79 1584 aa18.47■□□□□ 0.55
ATP13A1-203ENST00000455627 KIF13AQ9H1H9 1805 aa18.45■□□□□ 0.54
ATP13A1-203ENST00000455627 GRIN2AQ12879 1464 aa18.44■□□□□ 0.54
ATP13A1-203ENST00000455627 NUP160Q12769 1436 aa18.41■□□□□ 0.54
ATP13A1-203ENST00000455627 ADAMTS12P58397 1594 aa18.41■□□□□ 0.54
ATP13A1-203ENST00000455627 SHROOM2Q13796 1616 aa18.41■□□□□ 0.54
ATP13A1-203ENST00000455627 KIF27Q86VH2 1401 aa18.36■□□□□ 0.53
ATP13A1-203ENST00000455627 ERICH3Q5RHP9 1530 aa18.33■□□□□ 0.52
ATP13A1-203ENST00000455627 RUSC2Q8N2Y8 1516 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms