RNA–Protein interactions for RNA: ENST00000455371.5

PITRM1-208, Transcript of pitrilysin metallopeptidase 1, humanhuman

TSL 2

Gene PITRM1, Length 673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-208ENST00000455371 NISCHQ9Y2I1 1504 aa19.03■□□□□ 0.64
PITRM1-208ENST00000455371 CCDC180Q9P1Z9 1646 aa17.05■□□□□ 0.32
PITRM1-208ENST00000455371 ABCC9O60706 1549 aa16.67■□□□□ 0.26
PITRM1-208ENST00000455371 RB1CC1Q8TDY2 1594 aa15.97■□□□□ 0.15
PITRM1-208ENST00000455371 NACADO15069 1562 aa15.91■□□□□ 0.14
PITRM1-208ENST00000455371 UNC13AQ9UPW8 1703 aa15.9■□□□□ 0.14
PITRM1-208ENST00000455371 ZCCHC6Q5VYS8 1495 aaKnown RBP15.9■□□□□ 0.14
PITRM1-208ENST00000455371 MYO15BQ96JP2 1530 aa15.74■□□□□ 0.11
PITRM1-208ENST00000455371 DCAF8L2P0C7V8 631 aa15.71■□□□□ 0.11
PITRM1-208ENST00000455371 DCAF1Q9Y4B6 1507 aa15.7■□□□□ 0.1
PITRM1-208ENST00000455371 BICRAQ9NZM4 1560 aa15.62■□□□□ 0.09
PITRM1-208ENST00000455371 SCRIBQ14160 1630 aa15.59■□□□□ 0.09
PITRM1-208ENST00000455371 PABPN1Q86U42 306 aaKnown RBP eCLIP15.46■□□□□ 0.07
PITRM1-208ENST00000455371 AEBP2Q6ZN18 517 aaPredicted RBP15.33■□□□□ 0.04
PITRM1-208ENST00000455371 DNAJC5BQ9UF47 199 aa15.29■□□□□ 0.04
PITRM1-208ENST00000455371 SHROOM4Q9ULL8 1493 aa15.25■□□□□ 0.03
PITRM1-208ENST00000455371 EIF4G1Q04637 1599 aaKnown RBP15.15■□□□□ 0.02
PITRM1-208ENST00000455371 CC2D2AQ9P2K1 1620 aa15.13■□□□□ 0.01
PITRM1-208ENST00000455371 CECR2Q9BXF3 1484 aa14.93□□□□□ -0.02
PITRM1-208ENST00000455371 SMARCA4P51532 1647 aa14.87□□□□□ -0.03
PITRM1-208ENST00000455371 CHIC1Q5VXU3 224 aa14.75□□□□□ -0.05
PITRM1-208ENST00000455371 BAZ1AQ9NRL2 1556 aaPredicted RBP14.74□□□□□ -0.05
PITRM1-208ENST00000455371 MROH2BQ7Z745 1585 aa14.73□□□□□ -0.05
PITRM1-208ENST00000455371 ATAD2BQ9ULI0 1458 aa14.69□□□□□ -0.06
PITRM1-208ENST00000455371 PEG3Q9GZU2 1588 aa14.67□□□□□ -0.06
PITRM1-208ENST00000455371 SMARCA2P51531 1590 aa14.66□□□□□ -0.06
PITRM1-208ENST00000455371 HMGXB3Q12766 1538 aa14.66□□□□□ -0.06
PITRM1-208ENST00000455371 WIZO95785 1651 aa14.64□□□□□ -0.07
PITRM1-208ENST00000455371 NCAPD3P42695 1498 aa14.63□□□□□ -0.07
PITRM1-208ENST00000455371 BAZ1BQ9UIG0 1483 aaKnown RBP14.57□□□□□ -0.08
PITRM1-208ENST00000455371 NESP48681 1621 aa14.46□□□□□ -0.09
PITRM1-208ENST00000455371 RSF1Q96T23 1441 aaPredicted RBP14.45□□□□□ -0.1
PITRM1-208ENST00000455371 TOP2AP11388 1531 aaKnown RBP14.41□□□□□ -0.1
PITRM1-208ENST00000455371 KIF21AQ7Z4S6 1674 aa14.4□□□□□ -0.1
PITRM1-208ENST00000455371 THOC2Q8NI27 1593 aaKnown RBP14.33□□□□□ -0.12
PITRM1-208ENST00000455371 LAMC3Q9Y6N6 1575 aa14.33□□□□□ -0.12
PITRM1-208ENST00000455371 ERCC6Q03468 1493 aa14.29□□□□□ -0.12
PITRM1-208ENST00000455371 PRDM2Q13029 1718 aa14.29□□□□□ -0.12
PITRM1-208ENST00000455371 CCDC88BA6NC98 1476 aa14.17□□□□□ -0.14
PITRM1-208ENST00000455371 CADPSQ9ULU8 1353 aa14.16□□□□□ -0.14
PITRM1-208ENST00000455371 CUX2O14529 1486 aa14.15□□□□□ -0.14
PITRM1-208ENST00000455371 CFTRP13569 1480 aa14.14□□□□□ -0.15
PITRM1-208ENST00000455371 FANCD2Q9BXW9 1451 aa14.11□□□□□ -0.15
PITRM1-208ENST00000455371 WDR62O43379 1518 aa14.1□□□□□ -0.15
PITRM1-208ENST00000455371 PDS5BQ9NTI5 1447 aa14.09□□□□□ -0.15
PITRM1-208ENST00000455371 MRC2Q9UBG0 1479 aa14.09□□□□□ -0.15
PITRM1-208ENST00000455371 CEP164Q9UPV0 1460 aa14.09□□□□□ -0.15
PITRM1-208ENST00000455371 URB2Q14146 1524 aaKnown RBP14.05□□□□□ -0.16
PITRM1-208ENST00000455371 SUPT5HO00267 1087 aaKnown RBP13.94□□□□□ -0.18
PITRM1-208ENST00000455371 TOPBP1Q92547 1522 aa13.91□□□□□ -0.18
PITRM1-208ENST00000455371 DNMBPQ6XZF7 1577 aa13.9□□□□□ -0.18
PITRM1-208ENST00000455371 TARBP1Q13395 1621 aaKnown RBP13.84□□□□□ -0.19
PITRM1-208ENST00000455371 CUX1P39880 1505 aa13.84□□□□□ -0.19
PITRM1-208ENST00000455371 EIF4G3O43432 1585 aaKnown RBP13.83□□□□□ -0.19
PITRM1-208ENST00000455371 WDR97A6NE52 1622 aa13.82□□□□□ -0.2
PITRM1-208ENST00000455371 ZNF608Q9ULD9 1512 aaPredicted RBP13.81□□□□□ -0.2
PITRM1-208ENST00000455371 POLA1P09884 1462 aaPredicted RBP13.79□□□□□ -0.2
PITRM1-208ENST00000455371 ABCC8Q09428 1581 aa13.77□□□□□ -0.21
PITRM1-208ENST00000455371 SYNJ1O43426 1573 aa13.75□□□□□ -0.21
PITRM1-208ENST00000455371 FGD5Q6ZNL6 1462 aa13.75□□□□□ -0.21
PITRM1-208ENST00000455371 IFT140Q96RY7 1462 aa13.74□□□□□ -0.21
PITRM1-208ENST00000455371 BIVM-ERCC5R4GMW8 1640 aa13.74□□□□□ -0.21
PITRM1-208ENST00000455371 RAD54L2Q9Y4B4 1467 aa13.74□□□□□ -0.21
PITRM1-208ENST00000455371 CHD1O14646 1710 aa13.73□□□□□ -0.21
PITRM1-208ENST00000455371 PBRM1Q86U86 1689 aa13.7□□□□□ -0.22
PITRM1-208ENST00000455371 TOP2BQ02880 1626 aa13.68□□□□□ -0.22
PITRM1-208ENST00000455371 DNAJC5Q9H3Z4 198 aa13.67□□□□□ -0.22
PITRM1-208ENST00000455371 ABCA5Q8WWZ7 1642 aa13.66□□□□□ -0.22
PITRM1-208ENST00000455371 AQRO60306 1485 aaKnown RBP eCLIP13.64□□□□□ -0.23
PITRM1-208ENST00000455371 SOGA1O94964 1423 aa13.61□□□□□ -0.23
PITRM1-208ENST00000455371 WRNQ14191 1432 aaPredicted RBP eCLIP13.6□□□□□ -0.23
PITRM1-208ENST00000455371 TDRD9Q8NDG6 1382 aaKnown RBP13.58□□□□□ -0.24
PITRM1-208ENST00000455371 SNAPC4Q5SXM2 1469 aa13.57□□□□□ -0.24
PITRM1-208ENST00000455371 ABCA10Q8WWZ4 1543 aa13.57□□□□□ -0.24
PITRM1-208ENST00000455371 ADAMTS12P58397 1594 aa13.53□□□□□ -0.24
PITRM1-208ENST00000455371 RIMBP3CA6NJZ7 1639 aa13.5□□□□□ -0.25
PITRM1-208ENST00000455371 RIMBP3BA6NNM3 1639 aa13.5□□□□□ -0.25
PITRM1-208ENST00000455371 RIMBP3Q9UFD9 1639 aa13.5□□□□□ -0.25
PITRM1-208ENST00000455371 GAPVD1Q14C86 1478 aa13.5□□□□□ -0.25
PITRM1-208ENST00000455371 GRIN2BQ13224 1484 aa13.49□□□□□ -0.25
PITRM1-208ENST00000455371 MAGI1Q96QZ7 1491 aaPredicted RBP13.48□□□□□ -0.25
PITRM1-208ENST00000455371 CLASP1Q7Z460 1538 aa13.48□□□□□ -0.25
PITRM1-208ENST00000455371 SYNJ2O15056 1496 aa13.43□□□□□ -0.26
PITRM1-208ENST00000455371 ARHGEF11O15085 1522 aa13.43□□□□□ -0.26
PITRM1-208ENST00000455371 CEP170Q5SW79 1584 aa13.42□□□□□ -0.26
PITRM1-208ENST00000455371 ERICH3Q5RHP9 1530 aa13.39□□□□□ -0.27
PITRM1-208ENST00000455371 GRIN2AQ12879 1464 aa13.38□□□□□ -0.27
PITRM1-208ENST00000455371 OSCARQ8IYS5 282 aa13.38□□□□□ -0.27
PITRM1-208ENST00000455371 FBLN2P98095 1184 aa13.36□□□□□ -0.27
PITRM1-208ENST00000455371 ERCC6L2Q5T890 1561 aa13.36□□□□□ -0.27
PITRM1-208ENST00000455371 RUSC2Q8N2Y8 1516 aa13.35□□□□□ -0.27
PITRM1-208ENST00000455371 CUL7Q14999 1698 aa13.34□□□□□ -0.27
PITRM1-208ENST00000455371 ARAP1Q96P48 1450 aa13.34□□□□□ -0.27
PITRM1-208ENST00000455371 SHROOM2Q13796 1616 aa13.33□□□□□ -0.28
PITRM1-208ENST00000455371 FHAD1B1AJZ9 1412 aa13.3□□□□□ -0.28
PITRM1-208ENST00000455371 NUP160Q12769 1436 aa13.3□□□□□ -0.28
PITRM1-208ENST00000455371 KIF27Q86VH2 1401 aa13.26□□□□□ -0.29
PITRM1-208ENST00000455371 CHMP7Q8WUX9 453 aaPredicted RBP13.26□□□□□ -0.29
PITRM1-208ENST00000455371 TRIM41Q8WV44 630 aa13.26□□□□□ -0.29
PITRM1-208ENST00000455371 IGF1RP08069 1367 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms