RNA–Protein interactions for RNA: ENST00000455241.1

LINC00332-201, long intergenic non-protein coding RNA 332, humanhuman

TSL 3 BASIC

Gene LINC00332, Length 834 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00332-201ENST00000455241 NISCHQ9Y2I1 1504 aa30.06■■■□□ 2.4
LINC00332-201ENST00000455241 CCDC180Q9P1Z9 1646 aa26.79■■□□□ 1.88
LINC00332-201ENST00000455241 ABCC9O60706 1549 aa26.34■■□□□ 1.81
LINC00332-201ENST00000455241 RB1CC1Q8TDY2 1594 aa25.28■■□□□ 1.64
LINC00332-201ENST00000455241 NACADO15069 1562 aa25.22■■□□□ 1.63
LINC00332-201ENST00000455241 DCAF8L2P0C7V8 631 aa25.2■■□□□ 1.62
LINC00332-201ENST00000455241 MYO15BQ96JP2 1530 aa25.04■■□□□ 1.6
LINC00332-201ENST00000455241 ZCCHC6Q5VYS8 1495 aaKnown RBP24.99■■□□□ 1.59
LINC00332-201ENST00000455241 DCAF1Q9Y4B6 1507 aa24.87■■□□□ 1.57
LINC00332-201ENST00000455241 UNC13AQ9UPW8 1703 aa24.72■■□□□ 1.55
LINC00332-201ENST00000455241 PABPN1Q86U42 306 aaKnown RBP eCLIP24.6■■□□□ 1.53
LINC00332-201ENST00000455241 BICRAQ9NZM4 1560 aa24.52■■□□□ 1.52
LINC00332-201ENST00000455241 SCRIBQ14160 1630 aa24.4■■□□□ 1.5
LINC00332-201ENST00000455241 DNAJC5BQ9UF47 199 aa24.34■■□□□ 1.49
LINC00332-201ENST00000455241 SHROOM4Q9ULL8 1493 aa24.26■■□□□ 1.47
LINC00332-201ENST00000455241 EIF4G1Q04637 1599 aaKnown RBP23.88■■□□□ 1.41
LINC00332-201ENST00000455241 CC2D2AQ9P2K1 1620 aa23.82■■□□□ 1.4
LINC00332-201ENST00000455241 CECR2Q9BXF3 1484 aa23.68■■□□□ 1.38
LINC00332-201ENST00000455241 SMARCA4P51532 1647 aa23.34■■□□□ 1.33
LINC00332-201ENST00000455241 BAZ1AQ9NRL2 1556 aaPredicted RBP23.31■■□□□ 1.32
LINC00332-201ENST00000455241 NCAPD3P42695 1498 aa23.29■■□□□ 1.32
LINC00332-201ENST00000455241 ATAD2BQ9ULI0 1458 aa23.26■■□□□ 1.31
LINC00332-201ENST00000455241 SMARCA2P51531 1590 aa23.23■■□□□ 1.31
LINC00332-201ENST00000455241 MROH2BQ7Z745 1585 aa23.15■■□□□ 1.3
LINC00332-201ENST00000455241 HMGXB3Q12766 1538 aa23.13■■□□□ 1.29
LINC00332-201ENST00000455241 PEG3Q9GZU2 1588 aa23.13■■□□□ 1.29
LINC00332-201ENST00000455241 BAZ1BQ9UIG0 1483 aaKnown RBP23.05■■□□□ 1.28
LINC00332-201ENST00000455241 WIZO95785 1651 aa22.9■■□□□ 1.26
LINC00332-201ENST00000455241 RSF1Q96T23 1441 aaPredicted RBP22.85■■□□□ 1.25
LINC00332-201ENST00000455241 NESP48681 1621 aa22.75■■□□□ 1.23
LINC00332-201ENST00000455241 ERCC6Q03468 1493 aa22.71■■□□□ 1.23
LINC00332-201ENST00000455241 LAMC3Q9Y6N6 1575 aa22.68■■□□□ 1.22
LINC00332-201ENST00000455241 AEBP2Q6ZN18 517 aaPredicted RBP22.66■■□□□ 1.22
LINC00332-201ENST00000455241 TOP2AP11388 1531 aaKnown RBP22.64■■□□□ 1.21
LINC00332-201ENST00000455241 CADPSQ9ULU8 1353 aa22.6■■□□□ 1.21
LINC00332-201ENST00000455241 PDS5BQ9NTI5 1447 aa22.55■■□□□ 1.2
LINC00332-201ENST00000455241 CUX2O14529 1486 aa22.54■■□□□ 1.2
LINC00332-201ENST00000455241 KIF21AQ7Z4S6 1674 aa22.47■■□□□ 1.19
LINC00332-201ENST00000455241 CFTRP13569 1480 aa22.43■■□□□ 1.18
LINC00332-201ENST00000455241 THOC2Q8NI27 1593 aaKnown RBP22.42■■□□□ 1.18
LINC00332-201ENST00000455241 CCDC88BA6NC98 1476 aa22.4■■□□□ 1.18
LINC00332-201ENST00000455241 FANCD2Q9BXW9 1451 aa22.32■■□□□ 1.16
LINC00332-201ENST00000455241 MRC2Q9UBG0 1479 aa22.3■■□□□ 1.16
LINC00332-201ENST00000455241 CEP164Q9UPV0 1460 aa22.3■■□□□ 1.16
LINC00332-201ENST00000455241 PRDM2Q13029 1718 aa22.24■■□□□ 1.15
LINC00332-201ENST00000455241 WDR62O43379 1518 aa22.23■■□□□ 1.15
LINC00332-201ENST00000455241 SUPT5HO00267 1087 aaKnown RBP22.18■■□□□ 1.14
LINC00332-201ENST00000455241 URB2Q14146 1524 aaKnown RBP22.11■■□□□ 1.13
LINC00332-201ENST00000455241 DNAJC5Q9H3Z4 198 aa22.06■■□□□ 1.12
LINC00332-201ENST00000455241 ABCC8Q09428 1581 aa21.97■■□□□ 1.11
LINC00332-201ENST00000455241 TOPBP1Q92547 1522 aa21.96■■□□□ 1.11
LINC00332-201ENST00000455241 DNMBPQ6XZF7 1577 aa21.91■■□□□ 1.1
LINC00332-201ENST00000455241 IFT140Q96RY7 1462 aa21.85■■□□□ 1.09
LINC00332-201ENST00000455241 ZNF608Q9ULD9 1512 aaPredicted RBP21.75■■□□□ 1.07
LINC00332-201ENST00000455241 POLA1P09884 1462 aaPredicted RBP21.75■■□□□ 1.07
LINC00332-201ENST00000455241 TARBP1Q13395 1621 aaKnown RBP21.73■■□□□ 1.07
LINC00332-201ENST00000455241 CUX1P39880 1505 aa21.72■■□□□ 1.07
LINC00332-201ENST00000455241 SOGA1O94964 1423 aa21.68■■□□□ 1.06
LINC00332-201ENST00000455241 FGD5Q6ZNL6 1462 aa21.68■■□□□ 1.06
LINC00332-201ENST00000455241 RAD54L2Q9Y4B4 1467 aa21.66■■□□□ 1.06
LINC00332-201ENST00000455241 EIF4G3O43432 1585 aaKnown RBP21.65■■□□□ 1.06
LINC00332-201ENST00000455241 AQRO60306 1485 aaKnown RBP eCLIP21.63■■□□□ 1.05
LINC00332-201ENST00000455241 OSCARQ8IYS5 282 aa21.62■■□□□ 1.05
LINC00332-201ENST00000455241 TDRD9Q8NDG6 1382 aaKnown RBP21.58■■□□□ 1.04
LINC00332-201ENST00000455241 WDR97A6NE52 1622 aa21.55■■□□□ 1.04
LINC00332-201ENST00000455241 WRNQ14191 1432 aaPredicted RBP eCLIP21.55■■□□□ 1.04
LINC00332-201ENST00000455241 CHIC1Q5VXU3 224 aa21.51■■□□□ 1.03
LINC00332-201ENST00000455241 TOP2BQ02880 1626 aa21.51■■□□□ 1.03
LINC00332-201ENST00000455241 BIVM-ERCC5R4GMW8 1640 aa21.51■■□□□ 1.03
LINC00332-201ENST00000455241 SYNJ1O43426 1573 aa21.48■■□□□ 1.03
LINC00332-201ENST00000455241 ABCA10Q8WWZ4 1543 aa21.47■■□□□ 1.03
LINC00332-201ENST00000455241 GRIN2BQ13224 1484 aa21.44■■□□□ 1.02
LINC00332-201ENST00000455241 CHD1O14646 1710 aa21.42■■□□□ 1.02
LINC00332-201ENST00000455241 GAPVD1Q14C86 1478 aa21.42■■□□□ 1.02
LINC00332-201ENST00000455241 FBLN2P98095 1184 aa21.41■■□□□ 1.02
LINC00332-201ENST00000455241 SNAPC4Q5SXM2 1469 aa21.4■■□□□ 1.02
LINC00332-201ENST00000455241 MAGI1Q96QZ7 1491 aaPredicted RBP21.39■■□□□ 1.02
LINC00332-201ENST00000455241 ABCA5Q8WWZ7 1642 aa21.38■■□□□ 1.01
LINC00332-201ENST00000455241 PBRM1Q86U86 1689 aa21.36■■□□□ 1.01
LINC00332-201ENST00000455241 CHMP7Q8WUX9 453 aaPredicted RBP21.35■■□□□ 1.01
LINC00332-201ENST00000455241 SYNJ2O15056 1496 aa21.31■■□□□ 1
LINC00332-201ENST00000455241 RIMBP3CA6NJZ7 1639 aa21.24■□□□□ 0.99
LINC00332-201ENST00000455241 RIMBP3BA6NNM3 1639 aa21.24■□□□□ 0.99
LINC00332-201ENST00000455241 RIMBP3Q9UFD9 1639 aa21.24■□□□□ 0.99
LINC00332-201ENST00000455241 TRIM41Q8WV44 630 aa21.23■□□□□ 0.99
LINC00332-201ENST00000455241 ARHGEF11O15085 1522 aa21.21■□□□□ 0.99
LINC00332-201ENST00000455241 ERICH3Q5RHP9 1530 aa21.21■□□□□ 0.99
LINC00332-201ENST00000455241 CLASP1Q7Z460 1538 aa21.18■□□□□ 0.98
LINC00332-201ENST00000455241 ADAMTS12P58397 1594 aa21.18■□□□□ 0.98
LINC00332-201ENST00000455241 FHAD1B1AJZ9 1412 aa21.17■□□□□ 0.98
LINC00332-201ENST00000455241 GRIN2AQ12879 1464 aa21.15■□□□□ 0.98
LINC00332-201ENST00000455241 KIF27Q86VH2 1401 aa21.12■□□□□ 0.97
LINC00332-201ENST00000455241 NUP160Q12769 1436 aa21.07■□□□□ 0.96
LINC00332-201ENST00000455241 CYB5RLQ6IPT4 315 aa21.06■□□□□ 0.96
LINC00332-201ENST00000455241 IGF1RP08069 1367 aa21.06■□□□□ 0.96
LINC00332-201ENST00000455241 CEP170Q5SW79 1584 aa21.04■□□□□ 0.96
LINC00332-201ENST00000455241 ARAP1Q96P48 1450 aa21.03■□□□□ 0.96
LINC00332-201ENST00000455241 CUL7Q14999 1698 aa20.99■□□□□ 0.95
LINC00332-201ENST00000455241 CARMIL1Q5VZK9 1371 aa20.93■□□□□ 0.94
LINC00332-201ENST00000455241 SHROOM2Q13796 1616 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms